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RIFCSPHIGHO2_02_FULL_CPR_38_75_rifcsphigho2_02_scaffold_11415

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Displaying 30 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPHIGHO2_02_FULL_CPR_38_75_rifcsphigho2_02_scaffold_11415_1
GWA2_OD1_38_27, Parcubacteria, Bacteria

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75..299
DNA (225bp) protein (75aa)
hypothetical protein Tax=GWA2_OD1_38_27
RIFCSPHIGHO2_02_FULL_CPR_38_75_rifcsphigho2_02_scaffold_11415_2
GWA2_OD1_38_27, Parcubacteria, Bacteria

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296..481
DNA (186bp) protein (62aa)
hypothetical protein Tax=GWA2_OD1_38_27
RIFCSPHIGHO2_02_FULL_CPR_38_75_rifcsphigho2_02_scaffold_11415_3

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567..1016
DNA (450bp) protein (150aa)
hypothetical protein n=1 Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI0003733891
SsrA-binding protein {ECO:0000313|EMBL:KKQ96837.1}; TaxID=1618921 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC2_39_11.;"
smpB; SsrA-binding protein
RIFCSPHIGHO2_02_FULL_CPR_38_75_rifcsphigho2_02_scaffold_11415_4

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1732..2196
DNA (465bp) protein (155aa)
hypothetical protein n=1 Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI0003668D23
Translation initiation factor IF-3 {ECO:0000313|EMBL:KKQ96838.1}; TaxID=1618921 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC2_39_11.;"
translation initiation factor 3 (bIF-3)
RIFCSPHIGHO2_02_FULL_CPR_38_75_rifcsphigho2_02_scaffold_11415_5
RIFOXYB1_FULL_RIF_OD1_07_40_15_curated, RIF-OD1-7, Parcubacteria, Bacteria

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2253..2441
DNA (189bp) protein (63aa)
hypothetical protein n=1 Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI00037C08C5
hypothetical protein Tax=RIFOXYB1_FULL_RIF_OD1_07_40_15_curated
RIFCSPHIGHO2_02_FULL_CPR_38_75_rifcsphigho2_02_scaffold_11415_6
GWA2_OD1_38_27, Parcubacteria, Bacteria

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2448..2804
DNA (357bp) protein (119aa)
hypothetical protein n=1 Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI0003703DCA
50S ribosomal protein L20 {ECO:0000313|EMBL:KKQ67975.1}; TaxID=1618812 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_38_27.;"
rplT; 50S ribosomal protein L20
RIFCSPHIGHO2_02_FULL_CPR_38_75_rifcsphigho2_02_scaffold_11415_7
GWA2_OD1_38_27, Parcubacteria, Bacteria

Not on your lists

2804..2974
DNA (171bp) protein (57aa)
hypothetical protein Tax=GWA2_OD1_38_27
RIFCSPHIGHO2_02_FULL_CPR_38_75_rifcsphigho2_02_scaffold_11415_8
GWA2_OD1_38_27, Parcubacteria, Bacteria

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comp(3082..4722)
DNA (1641bp) protein (547aa)
Conserved hypothetical tpr repeat protein Tax=GWA2_OD1_38_27
Conserved hypothetical tpr repeat protein id=1828854 bin=GWE2_CPR3_35_7 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_CPR3_35_7 organism_group=CPR3 organism_desc=Good
hypothetical protein
RIFCSPHIGHO2_02_FULL_CPR_38_75_rifcsphigho2_02_scaffold_11415_9
GWA2_OD1_38_27, Parcubacteria, Bacteria

Not on your lists

comp(4799..6559)
DNA (1761bp) protein (587aa)
hypothetical protein n=1 Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI0003760ED3
PHP domain protein Tax=GWA2_OD1_38_27
PHP domain-containing protein
RIFCSPHIGHO2_02_FULL_CPR_38_75_rifcsphigho2_02_scaffold_11415_10
GWA2_OD1_38_27, Parcubacteria, Bacteria

Not on your lists

6643..6918
DNA (276bp) protein (92aa)
hypothetical protein Tax=GWA2_OD1_38_27
RIFCSPHIGHO2_02_FULL_CPR_38_75_rifcsphigho2_02_scaffold_11415_trna_1
unknown

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7091..7162
DNA (72bp)
transferRNA
RIFCSPHIGHO2_02_FULL_CPR_38_75_rifcsphigho2_02_scaffold_11415_11
GWA2_OD1_38_27, Parcubacteria, Bacteria

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comp(7214..7849)
DNA (636bp) protein (212aa)
hypothetical protein n=1 Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI0003738F41
Membrane protein, putative Tax=GWA2_OD1_38_27
membrane protein
RIFCSPHIGHO2_02_FULL_CPR_38_75_rifcsphigho2_02_scaffold_11415_12
GWA2_OD1_38_27, Parcubacteria, Bacteria

Not on your lists

comp(7902..8378)
DNA (477bp) protein (159aa)
hypothetical protein n=1 Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI000375ECC9
Transcription elongation factor GreA Tax=GWA2_OD1_38_27
transcription elongation factor greA
RIFCSPHIGHO2_02_FULL_CPR_38_75_rifcsphigho2_02_scaffold_11415_13

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comp(8565..10187)
DNA (1623bp) protein (541aa)
60 kDa chaperonin {ECO:0000313|EMBL:KKQ95998.1}; TaxID=1618921 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC2_39_11.;"
60 kDa chaperonin id=2670074 bin=GWA1_ZB2_49_26 species=GW2011_OD1_1 genus=GW2011_OD1_1 taxon_order=GW2011_OD1_1 taxon_class=GW2011_OD1_1 phylum=OD1 tax=GWA1_ZB2_49_26 organism_group=ZB2 organism_desc=Good
60 kDa chaperonin
RIFCSPHIGHO2_02_FULL_CPR_38_75_rifcsphigho2_02_scaffold_11415_14

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comp(10268..10558)
DNA (291bp) protein (97aa)
10 kDa chaperonin {ECO:0000313|EMBL:KKQ95997.1}; TaxID=1618921 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC2_39_11.;"
10 kDa chaperonin id=2670079 bin=GWA1_ZB2_49_26 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWA1_ZB2_49_26 organism_group=ZB2 organism_desc=Good
Co-chaperonin GroES
RIFCSPHIGHO2_02_FULL_CPR_38_75_rifcsphigho2_02_scaffold_11415_15
GWA2_OD1_38_27, Parcubacteria, Bacteria

Not on your lists

11200..11949
DNA (750bp) protein (250aa)
hypothetical protein Tax=GWA2_OD1_38_27
DNA alkylation repair protein
RIFCSPHIGHO2_02_FULL_CPR_38_75_rifcsphigho2_02_scaffold_11415_16
RBG_13_RIF_OD1_07_37_56_curated, RIF-OD1-7, Parcubacteria, Bacteria

Not on your lists

12269..12631
DNA (363bp) protein (121aa)
hypothetical protein Tax=RBG_13_RIF_OD1_07_37_56_curated
Putative uncharacterized protein id=2670096 bin=GWA1_ZB2_49_26 species=Spirosoma linguale genus=Spirosoma taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWA1_ZB2_49_26 organism_group=ZB2 organism_desc=Good
membrane protein
RIFCSPHIGHO2_02_FULL_CPR_38_75_rifcsphigho2_02_scaffold_11415_17
GWA2_OD1_38_27, Parcubacteria, Bacteria

Not on your lists

12807..13025
DNA (219bp) protein (73aa)
Protein-export membrane protein SecG Tax=GWA2_OD1_38_27
Preprotein translocase, SecG subunit id=2670101 bin=GWA1_ZB2_49_26 species=ACD9 genus=ACD9 taxon_order=ACD9 taxon_class=ACD9 phylum=OD1-i tax=GWA1_ZB2_49_26 organism_group=ZB2 organism_desc=Good
secG; protein-export membrane protein SecG
RIFCSPHIGHO2_02_FULL_CPR_38_75_rifcsphigho2_02_scaffold_11415_18
GWA2_OD1_38_27, Parcubacteria, Bacteria

Not on your lists

13051..15093
DNA (2043bp) protein (681aa)
ABC-type transporter, periplasmic subunit Tax=GWA2_OD1_38_27
Extracellular solute-binding protein id=2670106 bin=GWA1_ZB2_49_26 species=ACD63 genus=ACD63 taxon_order=ACD63 taxon_class=ACD63 phylum=OD1 tax=GWA1_ZB2_49_26 organism_group=ZB2 organism_desc=Good
ABC transporter periplasmic protein
RIFCSPHIGHO2_02_FULL_CPR_38_75_rifcsphigho2_02_scaffold_11415_19
GWA2_OD1_38_27, Parcubacteria, Bacteria

Not on your lists

15135..15671
DNA (537bp) protein (179aa)
Glucose-6-phosphate isomerase n=1 Tax=Archaeoglobus profundus (strain DSM 5631 / JCM 9629 / NBRC 100127 / Av18) RepID=D2RDU3_ARCPA
Glucose-6-phosphate isomerase Tax=GWA2_OD1_38_27
glucose-6-phosphate isomerase
RIFCSPHIGHO2_02_FULL_CPR_38_75_rifcsphigho2_02_scaffold_11415_trna_2
unknown

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15725..15808
DNA (84bp)
transferRNA
RIFCSPHIGHO2_02_FULL_CPR_38_75_rifcsphigho2_02_scaffold_11415_20
GWA2_OD1_38_27, Parcubacteria, Bacteria

Not on your lists

15874..17556
DNA (1683bp) protein (561aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2EDG5_9BACT
Putative Zn-dependent hydrolase (Beta-lactamase superfamily) Tax=GWA2_OD1_38_27
Zn-dependent hydrolase
RIFCSPHIGHO2_02_FULL_CPR_38_75_rifcsphigho2_02_scaffold_11415_21

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17734..18711
DNA (978bp) protein (326aa)
trpS; tryptophan--tRNA ligase TrpS (EC:6.1.1.2)
hypothetical protein n=1 Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI00035FD2BB
Tryptophan-tRNA ligase {ECO:0000313|EMBL:KKQ96671.1}; TaxID=1618921 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC2_39_11.;"
RIFCSPHIGHO2_02_FULL_CPR_38_75_rifcsphigho2_02_scaffold_11415_22
GWA2_OD1_38_27, Parcubacteria, Bacteria

Not on your lists

19008..19247
DNA (240bp) protein (80aa)
hypothetical protein Tax=GWA2_OD1_38_27
RIFCSPHIGHO2_02_FULL_CPR_38_75_rifcsphigho2_02_scaffold_11415_23
GWA2_OD1_38_27, Parcubacteria, Bacteria

Not on your lists

comp(19259..19810)
DNA (552bp) protein (184aa)
hypothetical protein n=1 Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI0003600678
PaaX domain protein Tax=GWA2_OD1_38_27
PaaX domain protein
RIFCSPHIGHO2_02_FULL_CPR_38_75_rifcsphigho2_02_scaffold_11415_24
GWA2_OD1_38_27, Parcubacteria, Bacteria

Not on your lists

comp(19905..21269)
DNA (1365bp) protein (455aa)
phosphomannomutase (EC:5.4.2.8)
Phosphomannomutase {ECO:0000313|EMBL:KKQ67958.1}; TaxID=1618812 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_38_27.;"
hypothetical protein id=5801292 bin=GWE2_OD1_42_8 species=GW2011_OD1_1 genus=GW2011_OD1_1 taxon_order=GW2011_OD1_1 taxon_class=GW2011_OD1_1 phylum=OD1 tax=GWE2_OD1_42_8 organism_group=OD1 (Parcubacteria) organism_desc=GW2011_OD1_1 GW2011_A
RIFCSPHIGHO2_02_FULL_CPR_38_75_rifcsphigho2_02_scaffold_11415_25
GWA2_OD1_38_27, Parcubacteria, Bacteria

Not on your lists


21435..21857
DNA (423bp) protein (141aa)
hypothetical protein n=1 Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI000382B162
30S ribosomal protein S6 Tax=GWA2_OD1_38_27
RIFCSPHIGHO2_02_FULL_CPR_38_75_rifcsphigho2_02_scaffold_11415_26

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21924..22430
DNA (507bp) protein (169aa)
single-stranded DNA-binding protein n=1 Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI0003754173
Single-stranded DNA-binding protein {ECO:0000313|EMBL:KKQ96666.1}; TaxID=1618921 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC2_39_11.;"
single-stranded DNA-binding protein
RIFCSPHIGHO2_02_FULL_CPR_38_75_rifcsphigho2_02_scaffold_11415_27
RBG_13_RIF_OD1_07_37_56_curated, RIF-OD1-7, Parcubacteria, Bacteria

Not on your lists


22575..22772
DNA (198bp) protein (66aa)
hypothetical protein n=1 Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI0003760B33
MCYN0691; 30S ribosomal protein S18 Tax=RBG_13_RIF_OD1_07_37_56_curated
30S ribosomal protein S18
RIFCSPHIGHO2_02_FULL_CPR_38_75_rifcsphigho2_02_scaffold_11415_28

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comp(22922..23953)
DNA (1032bp) protein (344aa)
recombinase RecA n=1 Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI00036C84F8
Protein RecA {ECO:0000313|EMBL:KKQ96665.1}; TaxID=1618921 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC2_39_11.;"
recA; protein RecA
Displaying 30 items

View Taxonomy