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RIFCSPHIGHO2_02_FULL_CPR_38_75_rifcsphigho2_02_scaffold_24219

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPHIGHO2_02_FULL_CPR_38_75_rifcsphigho2_02_scaffold_24219_1
RBG_13_RIF_OD1_07_37_56_curated, RIF-OD1-7, Parcubacteria, Bacteria

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2..1849
DNA (1848bp) protein (616aa)
hypothetical protein n=1 Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI00037F273B
Type II secretion system protein E Tax=RBG_13_RIF_OD1_07_37_56_curated
secretion system protein E
RIFCSPHIGHO2_02_FULL_CPR_38_75_rifcsphigho2_02_scaffold_24219_2

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1985..2350
DNA (366bp) protein (122aa)
Marine sediment metagenome DNA, contig: S06H3_L02122 {ECO:0000313|EMBL:GAI13738.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
response regulator receiver protein id=3594553 bin=GWA1_ZB2_49_26 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWA1_ZB2_49_26 organism_group=ZB2 organism_desc=Good
two component transcriptional regulator, winged helix family
RIFCSPHIGHO2_02_FULL_CPR_38_75_rifcsphigho2_02_scaffold_24219_3
RIFOXYB1_FULL_RIF_OD1_07_40_15_curated, RIF-OD1-7, Parcubacteria, Bacteria

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2463..3530
DNA (1068bp) protein (356aa)
hypothetical protein n=1 Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI0003714CBB
pilT; twitching motility protein Tax=RIFOXYB1_FULL_RIF_OD1_07_40_15_curated
pilT; twitching motility protein
RIFCSPHIGHO2_02_FULL_CPR_38_75_rifcsphigho2_02_scaffold_24219_4

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4197..5399
DNA (1203bp) protein (401aa)
hypothetical protein n=1 Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI00037DEC08
Type II secretion system protein {ECO:0000313|EMBL:KKQ96569.1}; TaxID=1618921 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC2_39_11.;"
pilus assembly protein PilC
RIFCSPHIGHO2_02_FULL_CPR_38_75_rifcsphigho2_02_scaffold_24219_5
unknown

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5437..5535
DNA (99bp) protein (33aa)

This feature has no annotations

RIFCSPHIGHO2_02_FULL_CPR_38_75_rifcsphigho2_02_scaffold_24219_6

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6117..6569
DNA (453bp) protein (151aa)
Uncharacterized protein {ECO:0000313|EMBL:KKQ96570.1}; TaxID=1618921 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC2_39_11.;"
Putative Tfp pilus assembly protein, major pilin PilA id=2061786 bin=GWD2_CPR2_39_7 species=ACD58_39_12 genus=ACD58_39_12 taxon_order=ACD58_39_12 taxon_class=ACD58_39_12 phylum=ACD58 tax=GWD2_CPR2_39_7 organism_group=CPR2 organism_desc=Same as C1_41_48, C2_39_35, D1_39_7
hypothetical protein
RIFCSPHIGHO2_02_FULL_CPR_38_75_rifcsphigho2_02_scaffold_24219_7

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6765..7595
DNA (831bp) protein (277aa)
pilD; type 4 prepilin-like proteins leader peptide-processing enzyme PilD (EC:3.4.23.43)
hypothetical protein n=1 Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI00036F7777
Type 4 prepilin-like protein leader peptide-processing enzyme PilD {ECO:0000313|EMBL:KKQ96571.1}; TaxID=1618921 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC2_39_11.;"
RIFCSPHIGHO2_02_FULL_CPR_38_75_rifcsphigho2_02_scaffold_24219_8

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7638..8180
DNA (543bp) protein (181aa)
Pilin assembly protein {ECO:0000313|EMBL:KKQ96572.1}; TaxID=1618921 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC2_39_11.;"
id=3594481 bin=GWA1_ZB2_49_26 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA1_ZB2_49_26 organism_group=ZB2 organism_desc=Good
pilin assembly protein
RIFCSPHIGHO2_02_FULL_CPR_38_75_rifcsphigho2_02_scaffold_24219_9

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8289..8717
DNA (429bp) protein (143aa)
hypothetical protein n=1 Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI000360A48E
Uncharacterized protein {ECO:0000313|EMBL:KKQ96573.1}; TaxID=1618921 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC2_39_11.;"
RIFCSPHIGHO2_02_FULL_CPR_38_75_rifcsphigho2_02_scaffold_24219_10

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8843..9385
DNA (543bp) protein (181aa)
hypothetical protein n=1 Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI0003747F1D
Uncharacterized protein {ECO:0000313|EMBL:KKQ96574.1}; TaxID=1618921 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC2_39_11.;"
RIFCSPHIGHO2_02_FULL_CPR_38_75_rifcsphigho2_02_scaffold_24219_11

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9382..10050
DNA (669bp) protein (223aa)
hypothetical protein n=1 Tax=Microgenomates bacterium SCGC AAA040-P11 RepID=UPI000380D48C
Uncharacterized protein {ECO:0000313|EMBL:KKQ96575.1}; TaxID=1618921 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC2_39_11.;"
RIFCSPHIGHO2_02_FULL_CPR_38_75_rifcsphigho2_02_scaffold_24219_12

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10289..11218
DNA (930bp) protein (310aa)
Uncharacterized protein {ECO:0000313|EMBL:KKQ96576.1}; Flags: Fragment;; TaxID=1618921 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC2_39_11.;"
collagen triple helix repeat domain protein id=15189790 bin=GWB1_SUB10_ACD81 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWB1_SUB10_ACD81 organism_group=OD1 (Parcubacteria) organism_desc=Complete
Displaying 12 items

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