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RIFCSPHIGHO2_02_FULL_CPR_38_75_rifcsphigho2_02_scaffold_2735

Search features with annotation key words

Displaying items 1-30 of 31 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPHIGHO2_02_FULL_CPR_38_75_rifcsphigho2_02_scaffold_2735_1
RBG_13_RIF_OD1_08_37_53_curated, RIF-OD1-8, Parcubacteria, Bacteria

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89..238
DNA (150bp) protein (50aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2A4F1_9BACT
hypothetical protein Tax=RBG_13_RIF_OD1_08_37_53_curated
RIFCSPHIGHO2_02_FULL_CPR_38_75_rifcsphigho2_02_scaffold_2735_2

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264..587
DNA (324bp) protein (108aa)
Uncharacterized protein {ECO:0000313|EMBL:KKQ97597.1}; TaxID=1618921 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC2_39_11.;"
hypothetical protein id=5097715 bin=PER_GWF2_43_18 species=PER_GWF2_42_17 genus=PER_GWF2_42_17 taxon_order=PER_GWF2_42_17 taxon_class=PER_GWF2_42_17 phylum=PER tax=PER_GWF2_43_18 organism_group=PER (Peregrinibacteria)
hypothetical protein
RIFCSPHIGHO2_02_FULL_CPR_38_75_rifcsphigho2_02_scaffold_2735_3

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830..964
DNA (135bp) protein (45aa)
Uncharacterized protein {ECO:0000313|EMBL:KKQ97596.1}; TaxID=1618921 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC2_39_11.;"
RIFCSPHIGHO2_02_FULL_CPR_38_75_rifcsphigho2_02_scaffold_2735_4

Not on your lists

1367..1801
DNA (435bp) protein (145aa)
hypothetical protein n=1 Tax=unclassified Aminicenantes RepID=UPI0003749E3C
TspO and MBR like protein {ECO:0000313|EMBL:KKQ97595.1}; TaxID=1618921 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC2_39_11.;"
TspO and MBR-like protein
RIFCSPHIGHO2_02_FULL_CPR_38_75_rifcsphigho2_02_scaffold_2735_5

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1991..2212
DNA (222bp) protein (74aa)
Uncharacterized protein {ECO:0000313|EMBL:KKQ97594.1}; TaxID=1618921 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC2_39_11.;"
UPF0235 protein Cyan7822_2348 id=2192998 bin=GWE2_OD1_40_11 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWE2_OD1_40_11 organism_group=OD1 (Parcubacteria)
hypothetical protein
RIFCSPHIGHO2_02_FULL_CPR_38_75_rifcsphigho2_02_scaffold_2735_6

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2278..2556
DNA (279bp) protein (93aa)
Methylated-DNA/protein-cysteine methyltransferase {ECO:0000313|EMBL:KKQ97593.1}; TaxID=1618921 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC2_39_11.;"
hypothetical protein id=30805 bin=ACD28 species=ACD28 genus=ACD28 taxon_order=ACD28 taxon_class=ACD28 phylum=PER tax=ACD28 organism_group=PER (Peregrinibacteria) organism_desc=PER
methylated-DNA/protein-cysteine methyltransferase
RIFCSPHIGHO2_02_FULL_CPR_38_75_rifcsphigho2_02_scaffold_2735_7
GWA2_OD1_38_27, Parcubacteria, Bacteria

Not on your lists

2672..3034
DNA (363bp) protein (121aa)
Uncharacterized protein {ECO:0000313|EMBL:KKQ68360.1}; TaxID=1618812 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_38_27.;"
id=3736898 bin=GWC2_OD1_43_27 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_OD1_43_27 organism_group=OD1 (Parcubacteria) organism_desc=Same as C1_43_61 and D1_43_18 Curated this version (complete)
RIFCSPHIGHO2_02_FULL_CPR_38_75_rifcsphigho2_02_scaffold_2735_8
GWA2_OD1_38_27, Parcubacteria, Bacteria

Not on your lists

3093..5009
DNA (1917bp) protein (639aa)
Uncharacterized protein Tax=GWA2_OD1_38_27
alias=gwe2_scaffold_601_69 id=15190479 bin=GWB1_SUB10_ACD81 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWB1_SUB10_ACD81 organism_group=OD1 (Parcubacteria) organism_desc=Complete
RIFCSPHIGHO2_02_FULL_CPR_38_75_rifcsphigho2_02_scaffold_2735_9

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5267..5494
DNA (228bp) protein (76aa)
Putative cold shock protein scoF n=1 Tax=uncultured bacterium RepID=K1Y6A1_9BACT
Cold shock-like protein {ECO:0000313|EMBL:KKQ97590.1}; TaxID=1618921 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC2_39_11.;"
hypothetical protein
RIFCSPHIGHO2_02_FULL_CPR_38_75_rifcsphigho2_02_scaffold_2735_10
GWA2_OD1_38_27, Parcubacteria, Bacteria

Not on your lists

5645..6676
DNA (1032bp) protein (344aa)
Ribosomal RNA large subunit methyltransferase N {ECO:0000313|EMBL:KKQ68357.1}; TaxID=1618812 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_38_27.;"
Probable dual-specificity RNA methyltransferase RlmN id=2837188 bin=GWF2_CPR3_35_18 species=ACD81 genus=ACD81 taxon_order=ACD81 taxon_class=ACD81 phylum=OD1 tax=GWF2_CPR3_35_18 organism_group=CPR3
radical SAM enzyme, Cfr family
RIFCSPHIGHO2_02_FULL_CPR_38_75_rifcsphigho2_02_scaffold_2735_11
GWA2_OD1_38_27, Parcubacteria, Bacteria

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6767..7735
DNA (969bp) protein (323aa)
GTPase obg Tax=GWA2_OD1_38_27
obgE; GTPase ObgE; K03979 GTP-binding protein id=3406 bin=ACD11 species=ACD11 genus=ACD11 taxon_order=ACD11 taxon_class=ACD11 phylum=OD1-i tax=ACD11 organism_group=OD1-i organism_desc=OD1-i
obg; GTPase protein Obg
RIFCSPHIGHO2_02_FULL_CPR_38_75_rifcsphigho2_02_scaffold_2735_12
GWA2_OD1_38_27, Parcubacteria, Bacteria

Not on your lists

7950..8222
DNA (273bp) protein (91aa)
Putative uncharacterized protein Tax=GWA2_OD1_38_27
id=3501812 bin=GWA1_ZB2_49_26 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA1_ZB2_49_26 organism_group=ZB2 organism_desc=Good
hypothetical protein
RIFCSPHIGHO2_02_FULL_CPR_38_75_rifcsphigho2_02_scaffold_2735_13
GWA2_OD1_38_27, Parcubacteria, Bacteria

Not on your lists

8392..8697
DNA (306bp) protein (102aa)
DNA polymerase subunit beta n=1 Tax=uncultured bacterium RepID=K2B412_9BACT
Uncharacterized protein {ECO:0000313|EMBL:KKQ68354.1}; TaxID=1618812 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_38_27.;"
DNA polymerase subunit beta
RIFCSPHIGHO2_02_FULL_CPR_38_75_rifcsphigho2_02_scaffold_2735_14
GWA2_OD1_38_27, Parcubacteria, Bacteria

Not on your lists

8840..9094
DNA (255bp) protein (85aa)
hypothetical protein Tax=GWA2_OD1_38_27
RIFCSPHIGHO2_02_FULL_CPR_38_75_rifcsphigho2_02_scaffold_2735_15

Not on your lists

9131..9451
DNA (321bp) protein (107aa)
Uncharacterized protein {ECO:0000313|EMBL:KKQ97585.1}; TaxID=1618921 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC2_39_11.;"
RIFCSPHIGHO2_02_FULL_CPR_38_75_rifcsphigho2_02_scaffold_2735_16
GWA2_OD1_38_27, Parcubacteria, Bacteria

Not on your lists

10060..10248
DNA (189bp) protein (63aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA011-A09 RepID=UPI00037C8E2D
Uncharacterized protein {ECO:0000313|EMBL:KKQ68351.1}; TaxID=1618812 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_38_27.;"
RIFCSPHIGHO2_02_FULL_CPR_38_75_rifcsphigho2_02_scaffold_2735_17

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10645..11322
DNA (678bp) protein (226aa)
Putative uncharacterized protein n=1 Tax=Carboxydothermus hydrogenoformans (strain Z-2901 / DSM 6008) RepID=Q3ADU8_CARHZ
Uncharacterized protein {ECO:0000313|EMBL:KKQ97583.1}; TaxID=1618921 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC2_39_11.;"
hypothetical protein
RIFCSPHIGHO2_02_FULL_CPR_38_75_rifcsphigho2_02_scaffold_2735_18
GWA2_OD1_38_27, Parcubacteria, Bacteria

Not on your lists

11328..12641
DNA (1314bp) protein (438aa)
AAA ATPase Tax=GWA2_OD1_38_27
aby:ABAYE1464 putative helicase id=16770 bin=ACD1 species=ACD1 genus=ACD1 taxon_order=ACD1 taxon_class=ACD1 phylum=OD1-i tax=ACD1 organism_group=OD1-i organism_desc=OD1-i
helicase
RIFCSPHIGHO2_02_FULL_CPR_38_75_rifcsphigho2_02_scaffold_2735_19

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12949..14505
DNA (1557bp) protein (519aa)
Radical SAM domain protein {ECO:0000313|EMBL:KKQ97581.1}; TaxID=1618921 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC2_39_11.;"
Radical SAM domain protein id=2883704 bin=GWF2_OP3_43_52 species=Desulfobacca acetoxidans genus=Desulfobacca taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
radical SAM protein
RIFCSPHIGHO2_02_FULL_CPR_38_75_rifcsphigho2_02_scaffold_2735_20
GWA2_OD1_38_27, Parcubacteria, Bacteria

Not on your lists

14651..17416
DNA (2766bp) protein (922aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K1XEZ6_9BACT
Calcium-translocating P-type ATPase, PMCA-type Tax=GWA2_OD1_38_27
P-type HAD superfamily ATPase
RIFCSPHIGHO2_02_FULL_CPR_38_75_rifcsphigho2_02_scaffold_2735_21

Not on your lists

17727..18680
DNA (954bp) protein (318aa)
Periplasmic solute binding protein {ECO:0000313|EMBL:KKQ97306.1}; TaxID=1618921 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC2_39_11.;"
acdA; divalent manganese/zinc-binding lipoprotein; K09815 zinc transport system substrate-binding protein id=8995 bin=ACD15 species=ACD15 genus=ACD15 taxon_order=ACD15 taxon_class=ACD15 phylum=OD1-i tax=ACD15 organism_group=OD1-i organism_desc=OD1-i
periplasmic solute binding protein
RIFCSPHIGHO2_02_FULL_CPR_38_75_rifcsphigho2_02_scaffold_2735_22
GWA2_OD1_38_27, Parcubacteria, Bacteria

Not on your lists

18689..19444
DNA (756bp) protein (252aa)
ABC-type Mn/Zn transport system ATPase component Tax=GWA2_OD1_38_27
Divalent manganese/zinc ABC transporter, ATP-binding protein id=4677439 bin=GWA2_Elusimicrobia_56_46 species=unknown genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Elusimicrobia_56_46 organism_group=Elusimicrobia organism_desc=Good
Mn/Zn ABC transporter ATPase
RIFCSPHIGHO2_02_FULL_CPR_38_75_rifcsphigho2_02_scaffold_2735_23
GWA2_OD1_38_27, Parcubacteria, Bacteria

Not on your lists

19529..20338
DNA (810bp) protein (270aa)
ABC-3 protein Tax=GWA2_OD1_38_27
ABC-3 protein; K09816 zinc transport system permease protein id=5093741 bin=PER_GWE2_39_6 species=PER_GWF2_39_17 genus=PER_GWF2_39_17 taxon_order=PER_GWF2_39_17 taxon_class=PER_GWF2_39_17 phylum=PER tax=PER_GWE2_39_6 organism_group=PER (Peregrinibacteria)
ABC-3 protein
RIFCSPHIGHO2_02_FULL_CPR_38_75_rifcsphigho2_02_scaffold_2735_24
GWA2_OD1_38_27, Parcubacteria, Bacteria

Not on your lists

20586..20816
DNA (231bp) protein (77aa)
Hypothetical HIT family hydrolase Tax=GWA2_OD1_38_27
HIT family hydrolase id=68643 bin=ACD49 species=ACD49 genus=ACD49 taxon_order=ACD49 taxon_class=ACD49 phylum=BD1-5 tax=ACD49 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5
HIT family hydrolase
RIFCSPHIGHO2_02_FULL_CPR_38_75_rifcsphigho2_02_scaffold_2735_25

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20821..22728
DNA (1908bp) protein (636aa)
Alanyl-tRNA synthetase {ECO:0000313|EMBL:KKQ97310.1}; TaxID=1618921 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC2_39_11.;"
Alanine--tRNA ligase id=2076238 bin=GWE2_OD1_38_254 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWE2_OD1_38_254 organism_group=OD1 (Parcubacteria)
Alanine-tRNA ligase
RIFCSPHIGHO2_02_FULL_CPR_38_75_rifcsphigho2_02_scaffold_2735_26
unknown

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22874..22975
DNA (102bp) protein (34aa)

This feature has no annotations

RIFCSPHIGHO2_02_FULL_CPR_38_75_rifcsphigho2_02_scaffold_2735_27
GWA2_OD1_38_27, Parcubacteria, Bacteria

Not on your lists

23162..23605
DNA (444bp) protein (148aa)
Putative uncharacterized protein Tax=GWA2_OD1_38_27
Uncharacterized protein id=3486306 bin=GWA1_ZB2_49_26 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWA1_ZB2_49_26 organism_group=ZB2 organism_desc=Good
hypothetical protein
RIFCSPHIGHO2_02_FULL_CPR_38_75_rifcsphigho2_02_scaffold_2735_28
GWA2_OD1_38_27, Parcubacteria, Bacteria

Not on your lists

23659..23973
DNA (315bp) protein (105aa)
hypothetical protein Tax=GWA2_OD1_38_27
id=2899561 bin=GWA1_ZB2_49_26 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA1_ZB2_49_26 organism_group=ZB2 organism_desc=Good
RIFCSPHIGHO2_02_FULL_CPR_38_75_rifcsphigho2_02_scaffold_2735_29
R_RIF_OD1_06_33_9, RIF-OD1-6, Parcubacteria, Bacteria

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comp(24231..24422)
DNA (192bp) protein (64aa)
hypothetical protein n=1 Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI000368F803
hypothetical protein Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_06_33_9_curated
RIFCSPHIGHO2_02_FULL_CPR_38_75_rifcsphigho2_02_scaffold_2735_30
GWA2_OD1_38_27, Parcubacteria, Bacteria

Not on your lists

24668..25300
DNA (633bp) protein (211aa)
Uncharacterized protein n=1 Tax=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) RepID=Q8TLA3_METAC
Putative uncharacterized protein Tax=GWA2_OD1_38_27
hypothetical protein
Displaying items 1-30 of 31 in total

View Taxonomy