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ar4r2_scaffold_1887

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ar4r2_scaffold_1887_1
unknown

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86..595
DNA (510bp) protein (170aa)

This feature has no annotations

ar4r2_scaffold_1887_2
GWC1_OD1-i_45_18, Moranbacteria, Parcubacteria, Bacteria

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comp(601..1068)
DNA (468bp) protein (156aa)
crossover junction endodeoxyribonuclease RuvC (EC:3.1.22.4)
Crossover junction endodeoxyribonuclease RuvC n=1 Tax=Filifactor alocis ATCC 35896 RepID=D6GTP9_9FIRM id=69693 bin=ACD49 species=Filifactor alocis genus=Filifactor taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=ACD49 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5
Holliday junction resolvase {ECO:0000313|EMBL:KKU00790.1}; TaxID=1618696 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Moranbacteria) bacterium GW2011_GWC1_45_18.;"
ar4r2_scaffold_1887_3
unknown

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comp(1119..1688)
DNA (570bp) protein (190aa)

This feature has no annotations

ar4r2_scaffold_1887_4

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comp(1726..2697)
DNA (972bp) protein (324aa)
primosomal protein N'; K04066 primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:3.6.1.-] id=132730 bin=ACD80 species=ACD80 genus=ACD80 taxon_order=ACD80 taxon_class=ACD80 phylum=SR1 tax=ACD80 organism_group=SR1
Uncharacterized protein {ECO:0000313|EMBL:EKD25563.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
ar4r2_scaffold_1887_5
RBG_13_RIF_OD1_08_41_18_curated, RIF-OD1-8, Parcubacteria, Bacteria

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comp(2687..3715)
DNA (1029bp) protein (343aa)
RluA family pseudouridine synthase (EC:3.2.1.17); K06180 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] Tax=RBG_13_RIF_OD1_08_41_18_curated
Pseudouridine synthase, RluA family n=1 Tax=Clostridiales bacterium BV3C26 RepID=U7UB82_9FIRM
rluD; ribosomal large subunit pseudouridine synthase D
ar4r2_scaffold_1887_6
GWC2_CPR2_39_35, CPR2, Bacteria

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3766..4893
DNA (1128bp) protein (376aa)
iscS1; cysteine desulfurase IscS (EC:2.8.1.7)
Cysteine desulfurase id=1820448 bin=GWD2_CPR2_39_7 species=Thermosinus carboxydivorans genus=Thermosinus taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=GWD2_CPR2_39_7 organism_group=CPR2 organism_desc=Same as C1_41_48, C2_39_35, D1_39_7
Cysteine desulfurase Tax=GWC2_CPR2_39_35
ar4r2_scaffold_1887_7
RHI_Saccharibacteria_41_12, Candidatus Saccharibacteria, Bacteria

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comp(4955..5374)
DNA (420bp) protein (140aa)
conserved membrane protein of unknown function Tax=RIFCSPHIGHO2_12_FULL_Saccharibacteria_41_12_curated
ar4r2_scaffold_1887_8
GWB1_OD1_45_9_partial, Giovannonibacteria, Parcubacteria, Bacteria

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comp(5445..6584)
DNA (1140bp) protein (380aa)
Putative tRNA threonylcarbamoyladenosine biosynthesis protein Gcp {ECO:0000313|EMBL:KKU16130.1}; TaxID=1618653 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacterium
Probable tRNA threonylcarbamoyladenosine biosynthesis protein Gcp id=2824031 bin=GWC1_OD1_38_17 species=ACD11 genus=ACD11 taxon_order=ACD11 taxon_class=ACD11 phylum=OD1-i tax=GWC1_OD1_38_17 organism_group=OD1 (Parcubacteria) organism_desc=Good + Candidate for curation
tRNA threonylcarbamoyladenosine biosynthesis protein Gcp
ar4r2_scaffold_1887_9
RIFOXYC2_FULL_OD1_Campbellbacteria_35_25_curated, Campbellbacteria, Parcubacteria, Bacteria

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comp(6588..7292)
DNA (705bp) protein (235aa)
putative ribonuclease III (EC:3.1.26.3) Tax=RIFOXYC2_FULL_OD1_Campbellbacteria_35_25_curated
Ribonuclease 3 id=3221707 bin=GWC1_CPR2_39_9 species=GWE2_OD1_46_68 genus=GWE2_OD1_46_68 taxon_order=GWE2_OD1_46_68 taxon_class=GWE2_OD1_46_68 phylum=OD1 tax=GWC1_CPR2_39_9 organism_group=CPR2 organism_desc=Good
Ribonuclease 3
ar4r2_scaffold_1887_10
unknown

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comp(7315..8037)
DNA (723bp) protein (241aa)

This feature has no annotations

ar4r2_scaffold_1887_11
R_RIF_OD1_09_51_11, RIF-OD1-9, Parcubacteria, Bacteria

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comp(8067..8684)
DNA (618bp) protein (206aa)
transmembrane_regions Tax=RIFCSPLOWO2_02_FULL_RIF_OD1_09_51_11_curated
ar4r2_scaffold_1887_12
unknown

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comp(8695..9342)
DNA (648bp) protein (216aa)

This feature has no annotations

ar4r2_scaffold_1887_13
CG_Kuenen_01, Kuenenbacteria, Parcubacteria, Bacteria

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9364..10113
DNA (750bp) protein (250aa)
50S ribosomal protein L7/L12 n=1 Tax=uncultured bacterium RepID=K2CT71_9BACT
hypothetical protein Tax=CG_Kuenen_01
50S ribosomal protein L7/L12
ar4r2_scaffold_1887_14
RLO_RIF_OD1_11_43_20, RIF-OD1-11, Parcubacteria, Bacteria

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10126..11472
DNA (1347bp) protein (449aa)
UDP-N-acetylmuramyl tripeptide synthetase; K01928 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_11_43_20_curated
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase id=2604228 bin=GWC1_CPR2_39_9 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWC1_CPR2_39_9 organism_group=CPR2 organism_desc=Good
murEF; bifunctional UDP-N-acetylmuramoyl-L-alanyl-D-glutamate-2,6-diaminopimelate ligase/UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase MurEF
ar4r2_scaffold_1887_15
unknown

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11477..12634
DNA (1158bp) protein (386aa)

This feature has no annotations

Displaying 15 items

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