ggKbase home page

cg1_0.2_scaffold_4393_c_19

Organism: CG1_02_FULL_Parcubacteria_OD1_44_65_curated

near complete RP 40 / 55 MC: 1 BSCG 42 / 51 MC: 3 ASCG 9 / 38 MC: 4
Location: 16358..17044

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L3 n=1 Tax=Caldithrix abyssi DSM 13497 RepID=H1XVH8_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 59.5
  • Coverage: 205.0
  • Bit_score: 234
  • Evalue 9.20e-59
  • rbh
rplC; ribosomal protein L3; K02906 large subunit ribosomal protein L3 Tax=CG_CPR01_01 similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 228.0
  • Bit_score: 458
  • Evalue 5.50e-126
rplC; 50S ribosomal protein L3 similarity KEGG
DB: KEGG
  • Identity: 56.7
  • Coverage: 203.0
  • Bit_score: 227
  • Evalue 5.40e-57

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

CG_CPR01_01 → CG_CPR01 → Bacteria

Sequences

DNA sequence
Length: 687
ATGAAATTCATTTTGGGCAGAAAAATTGGGATGAGTCAGATATTTGATGAAAGCGAGAAAGTTGTCCCGCTGACTTTAGTTGAAGCTGGTCCCTGTCCGGTCGTTCAAGTGAAGACAGATGAGAAGGACGGCTACTGTTCGACTCAAATTGCCTTTAGCAATATTAAAGACAAGAAGACAAAAAAGCCCCAGCGGGGTCATTTCAAAAAAGCCGGACTGAAAAAGAATTACCGCTACCTGAAAGAATTTAAGGGCGAGGGCGTGAAAGTGGGCGATGTTCTGACTGTTTCCATTTTTGCCAAAGGCGATCTGGTCAAGGTTTCGGGTATTTCCAAAGGGAAGGGTTTTCAAGGAGTGGTTAAAAGACATGGGTTCAAGGGCGGTCCAGCCTCGCACGGGACAAAGCATAATTTACGCGCTCCCGGTTCAATTGGCACGTCTTTCCCGGAAAGAGTTTGGAAAGGCAGAAAGATGGCTGGTCGAATGGGAAGCGATCGCGTCACCATCTTGGGCAAATTAAGAGTGGTCGCGGTAGATCCGGACAATAATCTGCTGGCTATTAGGGGTTCGGTGCCGGGCAGAAAAGGGACTCTTTTGGAAATAATCGGACAGGGCGAAATTAATCTAAACAAGAAAACTGGGAAAAAGAAGGATTTGCCGGTCAAAGAGGAAAAGAATCAATTATAG
PROTEIN sequence
Length: 229
MKFILGRKIGMSQIFDESEKVVPLTLVEAGPCPVVQVKTDEKDGYCSTQIAFSNIKDKKTKKPQRGHFKKAGLKKNYRYLKEFKGEGVKVGDVLTVSIFAKGDLVKVSGISKGKGFQGVVKRHGFKGGPASHGTKHNLRAPGSIGTSFPERVWKGRKMAGRMGSDRVTILGKLRVVAVDPDNNLLAIRGSVPGRKGTLLEIIGQGEINLNKKTGKKKDLPVKEEKNQL*