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cg1_0.2_scaffold_4393_c

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Displaying items 1-30 of 37 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cg1_0.2_scaffold_4393_c_1
R_OD1_39_11, Parcubacteria, Bacteria

Not on your lists

comp(1..162)
DNA (162bp) protein (54aa)
Transposase-like protein n=4 Tax=Riemerella anatipestifer RepID=F0TKA7_RIEAR rbh
putative insertion element transposase Tax=RIFCSPLOWO2_01_FULL_OD1_39_11_curated
hypothetical protein
cg1_0.2_scaffold_4393_c_2
CG_CPR01_01, CG_CPR01, Bacteria

Not on your lists

comp(300..1853)
DNA (1554bp) protein (518aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA010-E09 RepID=UPI000366E5FB
hypothetical protein Tax=CG_CPR01_01
hypothetical protein
cg1_0.2_scaffold_4393_c_3
CG_CPR01_01, CG_CPR01, Bacteria

Not on your lists

comp(2005..2448)
DNA (444bp) protein (148aa)
TrpR-related protein YerC/YecD Tax=CG_CPR01_01
Trp_repressor 20..100 id=16491 bin=ACD1 species=ACD1 genus=ACD1 taxon_order=ACD1 taxon_class=ACD1 phylum=OD1-i tax=ACD1 organism_group=OD1-i organism_desc=OD1-i rbh
TrpR-related protein YerC/YecD
cg1_0.2_scaffold_4393_c_trna_3
unknown

Not on your lists

comp(2549..2620)
DNA (72bp)
transferRNA
cg1_0.2_scaffold_4393_c_4
CG_CPR01_01, CG_CPR01, Bacteria

Not on your lists

comp(2781..3944)
DNA (1164bp) protein (388aa)
Tax=CG_CPR01_01
cg1_0.2_scaffold_4393_c_5
CG_CPR01_01, CG_CPR01, Bacteria

Not on your lists


4021..5334
DNA (1314bp) protein (438aa)
putative DNA-binding/iron metalloprotein/AP endonuclease (EC:3.4.24.57); K01409 O-sialoglycoprotein endopeptidase [EC:3.4.24.57] Tax=CG_CPR01_01
hypothetical protein; K01409 O-sialoglycoprotein endopeptidase [EC:3.4.24.57] id=5803482 bin=OD1_GWC2_34_28 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome rbh
putative DNA-binding/iron metalloprotein/AP endonuclease (EC:3.4.24.57)
cg1_0.2_scaffold_4393_c_6
CG_CPR01_01, CG_CPR01, Bacteria

Not on your lists

5368..6132
DNA (765bp) protein (255aa)
Protease prsW (EC:3.4.-.-) Tax=CG_CPR01_01
putative protease (EC:3.4.-.-)
hypothetical protein n=1 Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI0003801EA9 rbh
cg1_0.2_scaffold_4393_c_7
CG_CPR01_01, CG_CPR01, Bacteria

Not on your lists

6234..6788
DNA (555bp) protein (185aa)
heat shock protein, Hsp20 family; K13993 HSP20 family protein Tax=CG_CPR01_01
heat-shock protein Hsp20
cg1_0.2_scaffold_4393_c_8
CG_CPR01_01, CG_CPR01, Bacteria

Not on your lists

6903..8603
DNA (1701bp) protein (567aa)
hypothetical protein Tax=CG_CPR01_01
hypothetical protein
cg1_0.2_scaffold_4393_c_9
RLO_OD1_41_13, Parcubacteria, Bacteria

Not on your lists

comp(8493..8969)
DNA (477bp) protein (159aa)
recombinase Tax=RIFCSPLOWO2_12_FULL_OD1_41_13_curated
cg1_0.2_scaffold_4393_c_trna_1
unknown

Not on your lists

8722..8803
DNA (82bp)
transferRNA
cg1_0.2_scaffold_4393_c_10
CG_CPR01_01, CG_CPR01, Bacteria

Not on your lists

9276..9581
DNA (306bp) protein (102aa)
transmembrane_regions Tax=CG_CPR01_01
transmembrane_regions id=5803348 bin=OD1_GWC2_34_28 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
cg1_0.2_scaffold_4393_c_11
CG_CPR01_01, CG_CPR01, Bacteria

Not on your lists

9598..10167
DNA (570bp) protein (190aa)
putative General secretion pathway protein GspG Tax=CG_CPR01_01
N-terminal methylation motif domain-containing protein id=5803349 bin=OD1_GWC2_34_28 species=ACD43 genus=ACD43 taxon_order=ACD43 taxon_class=ACD43 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome rbh
Type II secretion system protein G
cg1_0.2_scaffold_4393_c_12
unknown

Not on your lists

10639..10779
DNA (141bp) protein (47aa)

This feature has no annotations

cg1_0.2_scaffold_4393_c_trna_2
unknown

Not on your lists

10905..10979
DNA (75bp)
transferRNA
cg1_0.2_scaffold_4393_c_13
CG_CPR01_01, CG_CPR01, Bacteria

Not on your lists


11052..11507
DNA (456bp) protein (152aa)
30S ribosomal protein S12; K02950 small subunit ribosomal protein S12 Tax=CG_CPR01_01
30S ribosomal protein S12
cg1_0.2_scaffold_4393_c_14
CG_CPR01_01, CG_CPR01, Bacteria

Not on your lists


11549..12016
DNA (468bp) protein (156aa)
30S ribosomal protein S7 n=1 Tax=candidate division OD1 bacterium RAAC4_OD1_1 RepID=V7Q161_9BACT rbh
30S ribosomal protein S7; K02992 small subunit ribosomal protein S7 Tax=CG_CPR01_01
SSU ribosomal protein S7p (S5e)
cg1_0.2_scaffold_4393_c_15
CG_CPR01_01, CG_CPR01, Bacteria

Not on your lists

12031..14193
DNA (2163bp) protein (721aa)
toc:Toce_0116 translation elongation factor 2 (EF-2/EF-G); K02355 elongation factor EF-G [EC:3.6.5.3] id=2672 bin=ACD11 species=ACD11 genus=ACD11 taxon_order=ACD11 taxon_class=ACD11 phylum=OD1-i tax=ACD11 organism_group=OD1-i organism_desc=OD1-i rbh
fusA2; elongation factor G Tax=CG_CPR01_01
fusA2; elongation factor G
cg1_0.2_scaffold_4393_c_16
CG_CPR01_01, CG_CPR01, Bacteria

Not on your lists

14250..14483
DNA (234bp) protein (78aa)
Tax=CG_CPR01_01
cg1_0.2_scaffold_4393_c_17
CG_CPR01_01, CG_CPR01, Bacteria

Not on your lists

14611..15837
DNA (1227bp) protein (409aa)
tuf; elongation factor Tu (EC:3.6.5.3)
tuf1; translation elongation factor Tu Tax=CG_CPR01_01
cg1_0.2_scaffold_4393_c_18
CG_CPR01_01, CG_CPR01, Bacteria

Not on your lists


15842..16186
DNA (345bp) protein (115aa)
rpsJ; 30S ribosomal protein S10; K02946 small subunit ribosomal protein S10 Tax=CG_CPR01_01
rpsJ; 30S ribosomal protein S10
cg1_0.2_scaffold_4393_c_19
CG_CPR01_01, CG_CPR01, Bacteria

Not on your lists


16358..17044
DNA (687bp) protein (229aa)
50S ribosomal protein L3 n=1 Tax=Caldithrix abyssi DSM 13497 RepID=H1XVH8_9BACT rbh
rplC; ribosomal protein L3; K02906 large subunit ribosomal protein L3 Tax=CG_CPR01_01
rplC; 50S ribosomal protein L3
cg1_0.2_scaffold_4393_c_20
CG_CPR01_01, CG_CPR01, Bacteria

Not on your lists


17047..17697
DNA (651bp) protein (217aa)
50S ribosomal protein L4; K02926 large subunit ribosomal protein L4 Tax=CG_CPR01_01
50S ribosomal protein L4
cg1_0.2_scaffold_4393_c_21
CG_CPR01_01, CG_CPR01, Bacteria

Not on your lists


17702..18115
DNA (414bp) protein (138aa)
hypothetical protein n=1 Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI000376BEC7 rbh
rplW; 50S ribosomal protein L23; K02892 large subunit ribosomal protein L23 Tax=CG_CPR01_01
rplW; 50S ribosomal protein L23
cg1_0.2_scaffold_4393_c_22
CG_CPR01_01, CG_CPR01, Bacteria

Not on your lists


18131..18973
DNA (843bp) protein (281aa)
50S ribosomal protein L2 n=1 Tax=Caldanaerobacter subterraneus subsp. yonseiensis KB-1 RepID=U5CMJ7_THEYO rbh
rplB; 50S ribosomal protein L2; K02886 large subunit ribosomal protein L2 Tax=CG_CPR01_01
rplB; 50S ribosomal protein L2
cg1_0.2_scaffold_4393_c_23
CG_CPR01_01, CG_CPR01, Bacteria

Not on your lists


18976..19275
DNA (300bp) protein (100aa)
30S ribosomal protein S19; K02965 small subunit ribosomal protein S19 Tax=CG_CPR01_01
30S ribosomal protein S19
cg1_0.2_scaffold_4393_c_24
CG_CPR01_01, CG_CPR01, Bacteria

Not on your lists


19280..19861
DNA (582bp) protein (194aa)
50S ribosomal protein L22; K02890 large subunit ribosomal protein L22 Tax=CG_CPR01_01
rplV; 50S ribosomal protein L22; K02890 large subunit ribosomal protein L22 id=133702 bin=ACD81 species=ACD81 genus=ACD81 taxon_order=ACD81 taxon_class=ACD81 phylum=OD1 tax=ACD81 organism_group=OD1 (Parcubacteria) organism_desc=OD1 rbh
50S ribosomal protein L22
cg1_0.2_scaffold_4393_c_25
CG_CPR01_01, CG_CPR01, Bacteria

Not on your lists


19948..20631
DNA (684bp) protein (228aa)
30S ribosomal protein S3 n=1 Tax=uncultured organism RepID=U3GU79_9ZZZZ rbh
30S ribosomal protein S3; K02982 small subunit ribosomal protein S3 Tax=CG_CPR01_01
30S ribosomal protein S3
cg1_0.2_scaffold_4393_c_26
CG_CPR01_01, CG_CPR01, Bacteria

Not on your lists


20603..21013
DNA (411bp) protein (137aa)
50S ribosomal protein L16; K02878 large subunit ribosomal protein L16 Tax=CG_CPR01_01
50S ribosomal protein L16
cg1_0.2_scaffold_4393_c_27
CG_CPR01_01, CG_CPR01, Bacteria

Not on your lists

21017..21208
DNA (192bp) protein (64aa)
hypothetical protein n=1 Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI000374EE7D rbh
hypothetical protein Tax=CG_CPR01_01
Displaying items 1-30 of 37 in total

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