ggKbase home page

cg1_0.2_scaffold_2938_c

Search features with annotation key words

Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cg1_0.2_scaffold_2938_c_1
CG_Nomura_03, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

77..994
DNA (918bp) protein (306aa)
hypothetical protein Tax=CG_Nomura_03
protein of unknown function DUF6 transmembrane id=136705 bin=ACD8 species=ACD8 genus=ACD8 taxon_order=ACD8 taxon_class=ACD8 phylum=OD1-i tax=ACD8 organism_group=OD1-i organism_desc=OD1-i rbh
hypothetical protein
cg1_0.2_scaffold_2938_c_2
CG_Nomura_03, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

1065..1457
DNA (393bp) protein (131aa)
Tax=CG_Nomura_03
cg1_0.2_scaffold_2938_c_3
CG_Nomura_03, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

1454..3109
DNA (1656bp) protein (552aa)
multisensor signal transduction histidine kinase Tax=CG_Nomura_03
PAS/PAC sensor signal transduction histidine kinase id=130225 bin=ACD7 species=ACD7 genus=ACD7 taxon_order=ACD7 taxon_class=ACD7 phylum=OD1-i tax=ACD7 organism_group=OD1-i organism_desc=OD1-i rbh
multisensor signal transduction histidine kinase
cg1_0.2_scaffold_2938_c_4
CG_Nomura_03, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

3216..3998
DNA (783bp) protein (261aa)
transmembrane_regions Tax=CG_Nomura_03
transmembrane_regions id=5226873 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria) rbh
cg1_0.2_scaffold_2938_c_5
CG_Nomura_03, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

4032..5213
DNA (1182bp) protein (394aa)
Uncharacterized protein n=1 Tax=candidate division OD1 bacterium RAAC4_OD1_1 RepID=V7PVE8_9BACT rbh
rod shape-determining protein RodA; K05837 rod shape determining protein RodA Tax=CG_Nomura_03
rod shape-determining protein RodA
cg1_0.2_scaffold_2938_c_6
CG_Nomura_03, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

5288..6124
DNA (837bp) protein (279aa)
folD; bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/5,10-methylene-tetrahydrofolate cyclohydrolase (EC:1.5.1.5 3.5.4.9); K01491 methylenetetrahydrofolate dehydrogenase (NADP+) / methenylt
folD; bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/5,10-methylene-tetrahydrofolate cyclohydrolase (EC:1.5.1.5 3.5.4.9); K01491 methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9] id=5226875 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria) rbh
folD; bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/5,10-methylene-tetrahydrofolate cyclohydrolase (EC:1.5.1.5 3.5.4.9)
cg1_0.2_scaffold_2938_c_7
CG_Nomura_03, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

6114..6653
DNA (540bp) protein (180aa)
PA-phosphatase like phosphoesterase Tax=CG_Nomura_03
Phosphatase id=5226876 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria) rbh
PA-phosphatase like phosphoesterase
cg1_0.2_scaffold_2938_c_8
CG_Nomura_03, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

6726..8087
DNA (1362bp) protein (454aa)
Preprotein translocase subunit SecD n=1 Tax=candidate division OD1 bacterium RAAC4_OD1_1 RepID=V7PVB5_9BACT rbh
protein-export membrane protein SecD; K03072 preprotein translocase subunit SecD Tax=CG_Nomura_03
protein-export membrane protein SecD
cg1_0.2_scaffold_2938_c_9
CG_Nomura_03, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

8160..9065
DNA (906bp) protein (302aa)
protein-export membrane protein SecF; K03074 preprotein translocase subunit SecF Tax=CG_Nomura_03
Protein-export membrane protein SecF id=5226878 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria) rbh
protein-export membrane protein SecF
cg1_0.2_scaffold_2938_c_10
CG_Nomura_03, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

9147..9704
DNA (558bp) protein (186aa)
LemA family protein; K03744 LemA protein Tax=CG_Nomura_03
membrane protein
cg1_0.2_scaffold_2938_c_11
CG_Nomura_03, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

9705..10604
DNA (900bp) protein (300aa)
htpX; putative protease HtpX (EC:3.4.24.-); K03799 heat shock protein HtpX [EC:3.4.24.-] Tax=CG_Nomura_03
htpX; putative protease HtpX (EC:3.4.24.-); K03799 heat shock protein HtpX [EC:3.4.24.-] id=5226880 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria) rbh
htpX; putative protease HtpX (EC:3.4.24.-)
cg1_0.2_scaffold_2938_c_12
CG_Nomura_03, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

10627..10899
DNA (273bp) protein (91aa)
glutamyl-tRNA(Gln) amidotransferase subunit C; K02435 aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7] Tax=CG_Nomura_03
glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase subunit C; K02435 aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7] id=5803069 bin=OD1_GWC2_34_28 species=Owenweeksia hongkongensis genus=Owenweeksia taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome rbh
glutamyl-tRNA(Gln) amidotransferase subunit C
cg1_0.2_scaffold_2938_c_13
CG_Nomura_03, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

10933..12363
DNA (1431bp) protein (477aa)
Glutamyl-tRNA(Gln) amidotransferase subunit A (EC:3.5.1.4); K02433 aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] Tax=CG_Nomura_03
glutamyl-tRNA(Gln) amidotransferase subunit A; K02433 aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] id=5803067 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome rbh
gatA; glutamyl-tRNA amidotransferase (EC:6.3.5.-)
cg1_0.2_scaffold_2938_c_14
CG_Nomura_03, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

12365..12997
DNA (633bp) protein (211aa)
transmembrane_regions Tax=CG_Nomura_03
transmembrane_regions id=5803066 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome rbh
cg1_0.2_scaffold_2938_c_15
CG_Nomura_03, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

13203..13895
DNA (693bp) protein (231aa)
hypothetical protein SghaA1_21382 n=1 Tax=Streptomyces ghanaensis ATCC 14672 RepID=UPI0001AF0DCB id=133051 bin=ACD81 species=Streptomyces ghanaensis genus=Streptomyces taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=ACD81 organism_group=OD1 (Parcubacteria) organism_desc=OD1 rbh
hypothetical protein
hypothetical protein SghaA1_21382 Tax=CG_Nomura_03
cg1_0.2_scaffold_2938_c_16
CG_Nomura_03, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

14015..14704
DNA (690bp) protein (230aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2FF41_9BACT rbh
LAGLIDADG-like domain protein
Uncharacterized protein Tax=CG_Nomura_03
cg1_0.2_scaffold_2938_c_17
CG_Nomura_03, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

14852..15226
DNA (375bp) protein (125aa)
Tax=CG_Nomura_03
cg1_0.2_scaffold_2938_c_18
CG_Nomura_03, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

15440..16036
DNA (597bp) protein (199aa)
hypothetical protein n=1 Tax=Methyloferula stellata RepID=UPI000366C25E rbh
hypothetical protein Tax=CG_Nomura_03
cg1_0.2_scaffold_2938_c_19
CG_Nomura_03, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

16380..16895
DNA (516bp) protein (172aa)
Tax=CG_Nomura_03
cg1_0.2_scaffold_2938_c_20
CG_Nomura_03, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

17057..17983
DNA (927bp) protein (309aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA011-N16 RepID=UPI0003B422C1 rbh
RNA-directed DNA polymerase Tax=CG_Nomura_03
RNA-directed DNA polymerase
cg1_0.2_scaffold_2938_c_21
R_OD1_Kaiserbacteria_54_24, Kaiserbacteria, Parcubacteria, Bacteria

Not on your lists

18113..18229
DNA (117bp) protein (39aa)
hypothetical protein; K07089 Tax=RIFCSPLOWO2_01_FULL_OD1_Kaiserbacteria_54_24_curated
cg1_0.2_scaffold_2938_c_22
CG_Nomura_03, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

18253..18672
DNA (420bp) protein (140aa)
hypothetical protein; K07089 Tax=CG_Nomura_03
id=5227130 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria) rbh
hypothetical protein
cg1_0.2_scaffold_2938_c_23
CG_Nomura_03, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

18718..19512
DNA (795bp) protein (265aa)
transmembrane_regions Tax=CG_Nomura_03
transmembrane_regions id=5227185 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria) rbh
cg1_0.2_scaffold_2938_c_24
CG_Nomura_03, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

19518..20048
DNA (531bp) protein (177aa)
Tax=CG_Nomura_03
cg1_0.2_scaffold_2938_c_25
CG_Nomura_03, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(20053..20541)
DNA (489bp) protein (163aa)
transmembrane_regions Tax=CG_Nomura_03
transmembrane_regions id=5802162 bin=PER_GWA2_38_35 species=PERA2_38_36 genus=PERA2_38_36 taxon_order=PERA2_38_36 taxon_class=PERA2_38_36 phylum=PER tax=PER_GWA2_38_35 organism_group=PER (Peregrinibacteria) organism_desc=This is the curated version (7 contigs can be represented as 5 scaffolds) rbh
cg1_0.2_scaffold_2938_c_26
CG_Nomura_03, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(20526..21071)
DNA (546bp) protein (182aa)
ECF subfamily RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=CG_Nomura_03
ECF subfamily RNA polymerase sigma factor
cg1_0.2_scaffold_2938_c_27
CG_Nomura_03, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(21152..21553)
DNA (402bp) protein (134aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2BEI9_9BACT rbh
hypothetical protein
Uncharacterized protein Tax=CG_Nomura_03
cg1_0.2_scaffold_2938_c_28
CG_Nomura_03, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

21686..21985
DNA (300bp) protein (100aa)
ArsR family transcriptional regulator; K03892 ArsR family transcriptional regulator Tax=CG_Nomura_03
ArsR family transcriptional regulator; K03892 ArsR family transcriptional regulator id=5101705 bin=GWF1_WS6_37_7 species=WS6_GWF1_36_7 genus=WS6_GWF1_36_7 taxon_order=WS6_GWF1_36_7 taxon_class=WS6_GWF1_36_7 phylum=WS6 tax=GWF1_WS6_37_7 organism_group=WS6 (Doikabacteria) rbh
Displaying 28 items

View Taxonomy