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cg1_0.2_scaffold_732_c

Search features with annotation key words

Displaying items 1-30 of 31 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cg1_0.2_scaffold_732_c_1
R_RIF_OD1_09_44_41, RIF-OD1-9, Parcubacteria, Bacteria

Not on your lists

comp(1..438)
DNA (438bp) protein (146aa)
Uncharacterized protein n=1 Tax=planctomycete KSU-1 RepID=I3IJ92_9PLAN rbh
lipoprotein Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_09_44_41_curated
lipoprotein
cg1_0.2_scaffold_732_c_2
CG_Nomura_01, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(590..1267)
DNA (678bp) protein (226aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA011-A09 RepID=UPI000361D698 rbh
hypothetical protein Tax=CG_Nomura_01
hypothetical protein
cg1_0.2_scaffold_732_c_3
CG_Nomura_01, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(1595..5005)
DNA (3411bp) protein (1137aa)
hypothetical protein Tax=CG_Nomura_01
hypothetical protein id=5803305 bin=OD1_GWC2_34_28 species=PERA2_38_36 genus=PERA2_38_36 taxon_order=PERA2_38_36 taxon_class=PERA2_38_36 phylum=PER tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome rbh
psrP; cell wall surface anchored protein
cg1_0.2_scaffold_732_c_4
CG_Nomura_01, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(5586..6479)
DNA (894bp) protein (298aa)
seg Tax=CG_Nomura_01
seg id=5803304 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome rbh
cg1_0.2_scaffold_732_c_5
CG_Nomura_01, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

6655..8904
DNA (2250bp) protein (750aa)
putative cell division FtsK/SpoIIIE Tax=CG_Nomura_01
ftsK; cell division protein ftsK; K03466 DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family id=5803303 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome rbh
cell division FtsK/SpoIIIE
cg1_0.2_scaffold_732_c_6
CG_Nomura_01, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

8959..9357
DNA (399bp) protein (133aa)
Tax=CG_Nomura_01
cg1_0.2_scaffold_732_c_7
CG_Nomura_01, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists


9403..10434
DNA (1032bp) protein (344aa)
protein recA Tax=CG_Nomura_01
id=5227534 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria) rbh
protein recA
cg1_0.2_scaffold_732_c_8
CG_Nomura_01, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

10988..11563
DNA (576bp) protein (192aa)
efp; elongation factor P; K02356 elongation factor P Tax=CG_Nomura_01
efp; elongation factor P; K02356 elongation factor P id=5803300 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome rbh
efp; elongation factor P
cg1_0.2_scaffold_732_c_9
R_RIF_OD1_09_47_33b, RIF-OD1-9, Parcubacteria, Bacteria

Not on your lists


comp(11612..11824)
DNA (213bp) protein (71aa)
rpsR; ribosomal protein S18 Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_09_47_33b_curated
rpsR; 30S ribosomal protein S18; K02963 small subunit ribosomal protein S18 id=5803296 bin=OD1_GWC2_34_28 species=ACD63 genus=ACD63 taxon_order=ACD63 taxon_class=ACD63 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome rbh
rpsR; ribosomal protein S18
cg1_0.2_scaffold_732_c_10
CG_Nomura_01, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(11966..12418)
DNA (453bp) protein (151aa)
Single-stranded DNA-binding protein n=1 Tax=candidate division OD1 bacterium RAAC4_OD1_1 RepID=V7PWC5_9BACT rbh
ssb; single-strand-binding protein; K03111 single-strand DNA-binding protein Tax=CG_Nomura_01
ssb; single-strand-binding protein
cg1_0.2_scaffold_732_c_11
CG_Nomura_01, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(12458..12949)
DNA (492bp) protein (164aa)
seg Tax=CG_Nomura_01
seg id=5227232 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria) rbh
cg1_0.2_scaffold_732_c_12
CG_Nomura_01, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(13190..14020)
DNA (831bp) protein (277aa)
yabD; Uncharacterized deoxyribonuclease YabD (EC:3.1.21.-) Tax=CG_Nomura_01
sec-independent protein translocase protein (EC:3.1.21.-); K03424 TatD DNase family protein [EC:3.1.21.-] id=5803293 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome rbh
yabD; Uncharacterized deoxyribonuclease YabD (EC:3.1.21.-)
cg1_0.2_scaffold_732_c_13
CG_Nomura_01, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists


comp(14075..15640)
DNA (1566bp) protein (522aa)
methionyl-tRNA synthetase; K01874 methionyl-tRNA synthetase [EC:6.1.1.10] Tax=CG_Nomura_01
methionyl-tRNA synthetase
cg1_0.2_scaffold_732_c_14
CG_Nomura_01, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(15653..16729)
DNA (1077bp) protein (359aa)
hypothetical protein Tax=CG_Nomura_01
hypothetical protein id=5803290 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome rbh
hypothetical protein
cg1_0.2_scaffold_732_c_15
CG_Nomura_01, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(16848..18116)
DNA (1269bp) protein (423aa)
peptidase M16 domain-containing protein Tax=CG_Nomura_01
peptidase M16 domain-containing protein id=5803288 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome rbh
zinc protease
cg1_0.2_scaffold_732_c_16
CG_Nomura_01, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(18321..18629)
DNA (309bp) protein (103aa)
Tax=CG_Nomura_01
cg1_0.2_scaffold_732_c_17
CG_Nomura_01, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists


comp(18679..20073)
DNA (1395bp) protein (465aa)
glyQS; Glycine--tRNA ligase (EC:6.1.1.14) Tax=CG_Nomura_01
glyQS; Glycine--tRNA ligase (EC:6.1.1.14) id=15190027 bin=GWB1_SUB10_ACD81 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWB1_SUB10_ACD81 organism_group=OD1 (Parcubacteria) organism_desc=Complete rbh
glyQS; Glycine--tRNA ligase (EC:6.1.1.14)
cg1_0.2_scaffold_732_c_18
CG_Nomura_01, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(20124..22034)
DNA (1911bp) protein (637aa)
transmembrane_regions Tax=CG_Nomura_01
transmembrane_regions id=5803285 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome rbh
cg1_0.2_scaffold_732_c_19
CG_Nomura_01, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(22088..22675)
DNA (588bp) protein (196aa)
DNA repair protein RecO; K03584 DNA repair protein RecO (recombination protein O) Tax=CG_Nomura_01
DNA repair protein RecO; K03584 DNA repair protein RecO (recombination protein O) id=5803284 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome rbh
DNA repair protein RecO
cg1_0.2_scaffold_732_c_20
CG_Nomura_01, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(22678..26178)
DNA (3501bp) protein (1167aa)
Isoleucyl-tRNA synthetase (EC:6.1.1.5); K01870 isoleucyl-tRNA synthetase [EC:6.1.1.5] Tax=CG_Nomura_01
Isoleucyl-tRNA synthetase (EC:6.1.1.5); K01870 isoleucyl-tRNA synthetase [EC:6.1.1.5] id=5803283 bin=OD1_GWC2_34_28 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome rbh
Isoleucyl-tRNA synthetase (EC:6.1.1.5)
cg1_0.2_scaffold_732_c_21
CG_Nomura_01, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(26242..27993)
DNA (1752bp) protein (584aa)
argS; arginyl-tRNA synthetase (EC:6.1.1.19) Tax=CG_Nomura_01
argS; arginyl-tRNA synthetase (EC:6.1.1.19)
Arginine-tRNA ligase n=1 Tax=candidate division OD1 bacterium RAAC4_OD1_1 RepID=V7PWD9_9BACT rbh
cg1_0.2_scaffold_732_c_22
CG_Nomura_01, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(28155..29333)
DNA (1179bp) protein (393aa)
glycine hydroxymethyltransferase (EC:2.1.2.1); K00600 glycine hydroxymethyltransferase [EC:2.1.2.1] Tax=CG_Nomura_01
glyA; glycine hydroxymethyltransferase (EC:2.1.2.1)
id=5227252 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria) rbh
cg1_0.2_scaffold_732_c_23
CG_Nomura_01, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(29348..29770)
DNA (423bp) protein (141aa)
deoxyuridine 5'-triphosphate nucleotidohydrolase (EC:3.6.1.23); K01520 dUTP pyrophosphatase [EC:3.6.1.23] Tax=CG_Nomura_01
deoxyuridine 5'-triphosphate nucleotidohydrolase (EC:3.6.1.23)
hypothetical protein id=5801874 bin=GWE2_OD1_42_8 species=GW2011_OD1_1 genus=GW2011_OD1_1 taxon_order=GW2011_OD1_1 taxon_class=GW2011_OD1_1 phylum=OD1 tax=GWE2_OD1_42_8 organism_group=OD1 (Parcubacteria) organism_desc=GW2011_OD1_1 GW2011_A rbh
cg1_0.2_scaffold_732_c_24
CG_Nomura_01, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

29870..30796
DNA (927bp) protein (309aa)
thymidylate synthase (EC:2.1.1.45); K00560 thymidylate synthase [EC:2.1.1.45] Tax=CG_Nomura_01
thymidylate synthase (EC:2.1.1.45)
cg1_0.2_scaffold_732_c_25
CG_Nomura_01, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

30930..31409
DNA (480bp) protein (160aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2F7Y2_9BACT rbh
Uncharacterized protein Tax=CG_Nomura_01
cg1_0.2_scaffold_732_c_26
CG_Nomura_01, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(31478..32332)
DNA (855bp) protein (285aa)
cytidine and deoxycytidylate deaminase; K01493 dCMP deaminase [EC:3.5.4.12] Tax=CG_Nomura_01
deoxycytidylate deaminase, putative; K01493 dCMP deaminase [EC:3.5.4.12] id=137803 bin=ACD9 species=ACD9 genus=ACD9 taxon_order=ACD9 taxon_class=ACD9 phylum=OD1-i tax=ACD9 organism_group=OD1-i organism_desc=OD1-i rbh
cytidine and deoxycytidylate deaminase
cg1_0.2_scaffold_732_c_27
CG_Nomura_01, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(32329..32952)
DNA (624bp) protein (208aa)
rfaE bifunctional protein Tax=CG_Nomura_01
cytidyltransferase-related domain protein id=137126 bin=ACD8 species=ACD8 genus=ACD8 taxon_order=ACD8 taxon_class=ACD8 phylum=OD1-i tax=ACD8 organism_group=OD1-i organism_desc=OD1-i rbh
rfaE bifunctional protein
cg1_0.2_scaffold_732_c_28
CG_Nomura_01, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists


comp(33109..33531)
DNA (423bp) protein (141aa)
50S ribosomal protein L11 Tax=CG_Nomura_01
50S ribosomal protein L11; K02867 large subunit ribosomal protein L11 id=5803276 bin=OD1_GWC2_34_28 species=Dialister micraerophilus genus=Dialister taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome rbh
rplK; 50S ribosomal protein L11
cg1_0.2_scaffold_732_c_29
CG_Nomura_01, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(33580..34125)
DNA (546bp) protein (182aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA040-L21 RepID=UPI000363D25D rbh
NusG antitermination factor; K02601 transcriptional antiterminator NusG Tax=CG_Nomura_01
NusG antitermination factor
cg1_0.2_scaffold_732_c_30
CG_Nomura_01, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(34138..34320)
DNA (183bp) protein (61aa)
Protein translocase complex, SecE/Sec61-gamma subunit Tax=CG_Nomura_01
Protein translocase complex, SecE/Sec61-gamma subunit id=5803274 bin=OD1_GWC2_34_28 species=ACD18 genus=ACD18 taxon_order=ACD18 taxon_class=ACD18 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome rbh
Displaying items 1-30 of 31 in total

View Taxonomy