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cg1_0.2_scaffold_5471_c

Search features with annotation key words

Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cg1_0.2_scaffold_5471_c_1
CG_Pacearch_06, Pacearchaeota, Archaea

Not on your lists

3..143
DNA (141bp) protein (47aa)
Tax=CG_Pacearch_06
cg1_0.2_scaffold_5471_c_2
CG_Pacearch_06, Pacearchaeota, Archaea

Not on your lists

155..340
DNA (186bp) protein (62aa)
Tax=CG_Pacearch_06
cg1_0.2_scaffold_5471_c_3
CG_Pacearch_06, Pacearchaeota, Archaea

Not on your lists


382..642
DNA (261bp) protein (87aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI0003600E98 rbh
50S ribosomal protein L21e; K02889 large subunit ribosomal protein L21e Tax=CG_Pacearch_06
rpl21E; 50S ribosomal protein L21e
cg1_0.2_scaffold_5471_c_4
CG_Pacearch_06, Pacearchaeota, Archaea

Not on your lists

639..941
DNA (303bp) protein (101aa)
Tax=CG_Pacearch_06
cg1_0.2_scaffold_5471_c_5
CG_Pacearch_06, Pacearchaeota, Archaea

Not on your lists

944..1483
DNA (540bp) protein (180aa)
hypothetical protein; K07572 putative nucleotide binding protein Tax=CG_Pacearch_06
DNA-binding protein
cg1_0.2_scaffold_5471_c_6
CG_Pacearch_06, Pacearchaeota, Archaea

Not on your lists


1485..1961
DNA (477bp) protein (159aa)
30S ribosomal protein S13 n=1 Tax=Nanoarchaeum equitans (strain Kin4-M) RepID=RS13_NANEQ id=5103690 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome rbh
rps13p; 30S ribosomal protein S13; K02952 small subunit ribosomal protein S13 Tax=CG_Pacearch_06
30S ribosomal protein S13
cg1_0.2_scaffold_5471_c_7
CG_Pacearch_06, Pacearchaeota, Archaea

Not on your lists


1964..2470
DNA (507bp) protein (169aa)
30S ribosomal protein S4; K02986 small subunit ribosomal protein S4 Tax=CG_Pacearch_06
30S ribosomal protein S4
cg1_0.2_scaffold_5471_c_8
CG_Pacearch_06, Pacearchaeota, Archaea

Not on your lists


2463..2921
DNA (459bp) protein (153aa)
30S ribosomal protein S11 n=1 Tax=Ferroglobus placidus (strain DSM 10642 / AEDII12DO) RepID=D3RX01_FERPA rbh
30S ribosomal protein S11; K02948 small subunit ribosomal protein S11 Tax=CG_Pacearch_06
SSU ribosomal protein S14e (S11p)
cg1_0.2_scaffold_5471_c_9
CG_Pacearch_06, Pacearchaeota, Archaea

Not on your lists

2946..3644
DNA (699bp) protein (233aa)
rpoD; DNA-directed RNA polymerase subunit D (EC:2.7.7.6); K03047 DNA-directed RNA polymerase subunit D [EC:2.7.7.6] Tax=CG_Pacearch_06
DNA-directed RNA polymerase subunit D n=1 Tax=Methanocella conradii (strain DSM 24694 / JCM 17849 / CGMCC 1.5162 / HZ254) RepID=H8I735_METCZ id=5103687 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome rbh
DNA-directed RNA polymerase subunit D
cg1_0.2_scaffold_5471_c_10
CG_Pacearch_06, Pacearchaeota, Archaea

Not on your lists


3738..4106
DNA (369bp) protein (123aa)
50S ribosomal protein L18e n=1 Tax=Methanosaeta thermophila (strain DSM 6194 / PT) RepID=A0B6F0_METTP rbh
50S ribosomal protein L18e; K02883 large subunit ribosomal protein L18e Tax=CG_Pacearch_06
50S ribosomal protein L18e
cg1_0.2_scaffold_5471_c_11
CG_Pacearch_06, Pacearchaeota, Archaea

Not on your lists


4103..4504
DNA (402bp) protein (134aa)
50S ribosomal protein L13P n=10 Tax=Thermococcus RepID=RL13_PYRKO id=5103680 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome rbh
ribosomal protein L13; K02871 large subunit ribosomal protein L13 Tax=CG_Pacearch_06
50S ribosomal protein L13P
cg1_0.2_scaffold_5471_c_12
CG_Pacearch_06, Pacearchaeota, Archaea

Not on your lists


4504..4905
DNA (402bp) protein (134aa)
30S ribosomal protein S9 n=1 Tax=Ferroglobus placidus (strain DSM 10642 / AEDII12DO) RepID=D3S037_FERPA rbh
30S ribosomal protein S9; K02996 small subunit ribosomal protein S9 Tax=CG_Pacearch_06
30S ribosomal protein S9
cg1_0.2_scaffold_5471_c_13
CG_Pacearch_06, Pacearchaeota, Archaea

Not on your lists

comp(4906..5712)
DNA (807bp) protein (269aa)
integrase family protein n=1 Tax=Anaerophaga thermohalophila DSM 12881 RepID=UPI000237D181 id=5103180 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome rbh
tyrosine type site-specific recombinase Tax=CG_Pacearch_06
integrase family protein
cg1_0.2_scaffold_5471_c_14
CG_Pacearch_06, Pacearchaeota, Archaea

Not on your lists

comp(5790..6239)
DNA (450bp) protein (150aa)
Tax=CG_Pacearch_06
cg1_0.2_scaffold_5471_c_15
CG_Pacearch_06, Pacearchaeota, Archaea

Not on your lists

comp(6227..7387)
DNA (1161bp) protein (387aa)
Tax=CG_Pacearch_06
cg1_0.2_scaffold_5471_c_16
CG_Pacearch_06, Pacearchaeota, Archaea

Not on your lists

7519..7980
DNA (462bp) protein (154aa)
Peptidyl-prolyl cis-trans isomerase n=1 Tax=Methanohalophilus mahii (strain ATCC 35705 / DSM 5219 / SLP) RepID=D5EA05_METMS rbh
peptidylprolyl isomerase FKBP-type Tax=CG_Pacearch_06
peptidylprolyl isomerase FKBP-type
cg1_0.2_scaffold_5471_c_17
CG_Pacearch_06, Pacearchaeota, Archaea

Not on your lists

8005..8226
DNA (222bp) protein (74aa)
DNA-directed RNA polymerase I, II, and III, 7.3 kDa polypeptide; K00960 DNA-directed RNA polymerase [EC:2.7.7.6] Tax=CG_Pacearch_06
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00037944A6 rbh
hypothetical protein
cg1_0.2_scaffold_5471_c_18
CG_Pacearch_06, Pacearchaeota, Archaea

Not on your lists

8277..9872
DNA (1596bp) protein (532aa)
RecJ-like exonuclease (DnaJ-type Zn finger protein); K07463 archaea-specific RecJ-like exonuclease Tax=CG_Pacearch_06
RecJ-like exonuclease (DnaJ-type Zn finger protein)
cg1_0.2_scaffold_5471_c_19
CG_Pacearch_06, Pacearchaeota, Archaea

Not on your lists

comp(9879..10424)
DNA (546bp) protein (182aa)
Tax=CG_Pacearch_06
cg1_0.2_scaffold_5471_c_20
CG_Pacearch_06, Pacearchaeota, Archaea

Not on your lists

comp(10479..11018)
DNA (540bp) protein (180aa)
Tax=CG_Pacearch_06
cg1_0.2_scaffold_5471_c_21
CG_Pacearch_06, Pacearchaeota, Archaea

Not on your lists

comp(11058..11342)
DNA (285bp) protein (95aa)
Tax=CG_Pacearch_06
cg1_0.2_scaffold_5471_c_22
unknown

Not on your lists

comp(11349..11510)
DNA (162bp) protein (54aa)

This feature has no annotations

cg1_0.2_scaffold_5471_c_23
CG_Pacearch_06, Pacearchaeota, Archaea

Not on your lists

comp(11549..11800)
DNA (252bp) protein (84aa)
Uncharacterized protein n=1 Tax=Ferroplasma sp. Type II RepID=T0NH92_9EURY rbh
RelE protein; K06218 RelE protein Tax=CG_Pacearch_06
putative RelE protein
cg1_0.2_scaffold_5471_c_24
CG_Pacearch_06, Pacearchaeota, Archaea

Not on your lists

comp(11801..12022)
DNA (222bp) protein (74aa)
Uncharacterized protein n=1 Tax=Ferroplasma sp. Type II RepID=T0M7E8_9EURY rbh
hypothetical protein Tax=CG_Pacearch_06
hypothetical protein
cg1_0.2_scaffold_5471_c_25
CG_Pacearch_06, Pacearchaeota, Archaea

Not on your lists

12142..12927
DNA (786bp) protein (262aa)
hypothetical protein
id=3230410 Tax=CG_Pacearch_06
cg1_0.2_scaffold_5471_c_26
CG_Pacearch_06, Pacearchaeota, Archaea

Not on your lists

12906..13079
DNA (174bp) protein (58aa)
Tax=CG_Pacearch_06
cg1_0.2_scaffold_5471_c_27
CG_Pacearch_06, Pacearchaeota, Archaea

Not on your lists

13222..16956
DNA (3735bp) protein (1245aa)
hypothetical protein Tax=CG_Pacearch_06
hypothetical protein id=5803292 bin=OD1_GWC2_34_28 species=ACD9 genus=ACD9 taxon_order=ACD9 taxon_class=ACD9 phylum=OD1-i tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome rbh
hypothetical protein
Displaying 27 items

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