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cg1_0.2_scaffold_3141_c

Search features with annotation key words

Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cg1_0.2_scaffold_3141_c_1
CG_Pacearch_03, Pacearchaeota, Archaea

Not on your lists

comp(1..360)
-----------------
DNA (360bp)
protein (120aa)
Holliday junction resolvase Tax=CG_Pacearch_03
Holliday junction-type resolvase; K03552 holliday junction resolvase, archaea type id=24619736 bin=Halonotius_J07HN4 species=Halonotius sp. J07HN4 genus=Halonotius taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Halonotius_J07HN4 rbh
nucleoid-structuring protein H-NS
cg1_0.2_scaffold_3141_c_2
CG_Pacearch_03, Pacearchaeota, Archaea

Not on your lists

comp(368..898)
-----------------
DNA (531bp)
protein (177aa)
Tax=CG_Pacearch_03
cg1_0.2_scaffold_3141_c_3
CG_Pacearch_03, Pacearchaeota, Archaea

Not on your lists

comp(933..1097)
-----------------
DNA (165bp)
protein (55aa)
Tax=CG_Pacearch_03
cg1_0.2_scaffold_3141_c_4
CG_Pacearch_03, Pacearchaeota, Archaea

Not on your lists

comp(1109..2590)
-----------------
DNA (1482bp)
protein (494aa)
Lysyl-tRNA synthetase (EC:6.1.1.6); K04567 lysyl-tRNA synthetase, class II [EC:6.1.1.6] Tax=CG_Pacearch_03
lysine--tRNA ligase n=1 Tax=SAR324 cluster bacterium SCGC AAA001-C10 RepID=UPI00028A0C2B id=5103293 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome rbh
lysine-tRNA ligase
cg1_0.2_scaffold_3141_c_5
CG_Pacearch_03, Pacearchaeota, Archaea

Not on your lists

comp(2631..3074)
-----------------
DNA (444bp)
protein (148aa)
Tax=CG_Pacearch_03
cg1_0.2_scaffold_3141_c_6
CG_Pacearch_03, Pacearchaeota, Archaea

Not on your lists

3188..3373
-----------------
DNA (186bp)
protein (62aa)
Tax=CG_Pacearch_03
cg1_0.2_scaffold_3141_c_7
CG_Pacearch_03, Pacearchaeota, Archaea

Not on your lists

comp(3400..3675)
-----------------
DNA (276bp)
protein (92aa)
acylphosphatase; K01512 acylphosphatase [EC:3.6.1.7] Tax=CG_Pacearch_03
acylphosphatase n=1 Tax=Thermodesulfatator atlanticus RepID=UPI0003B34371 rbh
acylphosphatase
cg1_0.2_scaffold_3141_c_8
CG_Pacearch_03, Pacearchaeota, Archaea

Not on your lists

comp(3706..4458)
-----------------
DNA (753bp)
protein (251aa)
Uncharacterized protein n=1 Tax=Desulforudis audaxviator (strain MP104C) RepID=B1I1Q6_DESAP rbh
hypothetical protein Tax=CG_Pacearch_03
hypothetical protein
cg1_0.2_scaffold_3141_c_9
CG_Pacearch_03, Pacearchaeota, Archaea

Not on your lists

comp(4506..5120)
-----------------
DNA (615bp)
protein (205aa)
RNA base methyltransferase family enzyme n=1 Tax=nanoarchaeote Nst1 RepID=R1FT05_9ARCH id=5103444 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome rbh
hypothetical protein Tax=CG_Pacearch_03
RNA base methyltransferase family enzyme
cg1_0.2_scaffold_3141_c_10
CG_Pacearch_03, Pacearchaeota, Archaea

Not on your lists

comp(5194..6009)
-----------------
DNA (816bp)
protein (272aa)
truB; putative tRNA pseudouridine synthase B (EC:4.2.1.70); K11131 H/ACA ribonucleoprotein complex subunit 4 [EC:5.4.99.-] Tax=CG_Pacearch_03
truB; putative tRNA pseudouridine synthase B (EC:4.2.1.70)
cg1_0.2_scaffold_3141_c_11
CG_Pacearch_03, Pacearchaeota, Archaea

Not on your lists

6085..6300
-----------------
DNA (216bp)
protein (72aa)
hypothetical protein Tax=CG_Pacearch_03
putative membrane protein
cg1_0.2_scaffold_3141_c_12
CG_Pacearch_03, Pacearchaeota, Archaea

Not on your lists

comp(6289..6978)
-----------------
DNA (690bp)
protein (230aa)
Putative DNA alkylation repair enzyme Tax=CG_Pacearch_03
Uncharacterized protein id=5800365 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized rbh
DNA alkylation repair enzyme
cg1_0.2_scaffold_3141_c_13
CG_Pacearch_03, Pacearchaeota, Archaea

Not on your lists

comp(7008..7541)
-----------------
DNA (534bp)
protein (178aa)
50S ribosomal protein L31e n=1 Tax=Methanocaldococcus fervens (strain DSM 4213 / JCM 157852 / AG86) RepID=C7P6G3_METFA rbh
50S ribosomal protein L31e; K02910 large subunit ribosomal protein L31e Tax=CG_Pacearch_03
50S ribosomal protein L31e
cg1_0.2_scaffold_3141_c_14
CG_Pacearch_03, Pacearchaeota, Archaea

Not on your lists

comp(7548..7748)
-----------------
DNA (201bp)
protein (67aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00036C1FE9 rbh
hypothetical protein
hypothetical protein Tax=CG_Pacearch_03
cg1_0.2_scaffold_3141_c_15
CG_Pacearch_03, Pacearchaeota, Archaea

Not on your lists

comp(7745..8014)
-----------------
DNA (270bp)
protein (90aa)
Tax=CG_Pacearch_03
cg1_0.2_scaffold_3141_c_16
CG_Pacearch_03, Pacearchaeota, Archaea

Not on your lists


comp(8011..8436)
-----------------
DNA (426bp)
protein (142aa)
30S ribosomal protein S19e n=1 Tax=Pyrococcus sp. ST04 RepID=I3RF22_9EURY rbh
30S ribosomal protein S19e Tax=CG_Pacearch_03
30S ribosomal protein S19
cg1_0.2_scaffold_3141_c_17
CG_Pacearch_03, Pacearchaeota, Archaea

Not on your lists

comp(8481..8786)
-----------------
DNA (306bp)
protein (102aa)
Tax=CG_Pacearch_03
cg1_0.2_scaffold_3141_c_18
CG_Pacearch_03, Pacearchaeota, Archaea

Not on your lists

comp(8740..9309)
-----------------
DNA (570bp)
protein (190aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI0003817B8A rbh
hypothetical protein Tax=CG_Pacearch_03
hypothetical protein
cg1_0.2_scaffold_3141_c_19
CG_Pacearch_03, Pacearchaeota, Archaea

Not on your lists

comp(9344..10639)
-----------------
DNA (1296bp)
protein (432aa)
ribulose bisphosphate carboxylase, type III (EC:4.1.1.39); K01601 ribulose-bisphosphate carboxylase large chain [EC:4.1.1.39] Tax=CG_Pacearch_03
rbcL; ribulose bisophosphate carboxylase (EC:4.1.1.39); K01601 ribulose-bisphosphate carboxylase large chain [EC:4.1.1.39] id=18248948 bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft rbh
ribulose bisphosphate carboxylase, type III (EC:4.1.1.39)
Archaeal Type III ajprobst (7/4/15)
cg1_0.2_scaffold_3141_c_20
CG_Pacearch_03, Pacearchaeota, Archaea

Not on your lists

comp(10641..11204)
-----------------
DNA (564bp)
protein (188aa)
Tax=CG_Pacearch_03
cg1_0.2_scaffold_3141_c_21
CG_Pacearch_03, Pacearchaeota, Archaea

Not on your lists

comp(11204..11479)
-----------------
DNA (276bp)
protein (92aa)
Tax=CG_Pacearch_03
cg1_0.2_scaffold_3141_c_trna_1
unknown

Not on your lists

comp(11610..11681)
-----------------
DNA (72bp)
transferRNA
cg1_0.2_scaffold_3141_c_22
CG_Pacearch_03, Pacearchaeota, Archaea

Not on your lists

11775..12086
-----------------
DNA (312bp)
protein (104aa)
Tax=CG_Pacearch_03
cg1_0.2_scaffold_3141_c_23
CG_Pacearch_03, Pacearchaeota, Archaea

Not on your lists

12450..12887
-----------------
DNA (438bp)
protein (146aa)
Tax=CG_Pacearch_03
cg1_0.2_scaffold_3141_c_24
CG_Pacearch_03, Pacearchaeota, Archaea

Not on your lists

12927..13814
-----------------
DNA (888bp)
protein (296aa)
Hypothetical membrane protein n=1 Tax=uncultured archaeon RepID=D1JH30_9ARCH rbh
hypothetical protein Tax=CG_Pacearch_03
hypothetical protein
Displaying 25 items

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