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cg1_0.2_scaffold_10546_c

Search features with annotation key words

Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cg1_0.2_scaffold_10546_c_1
CG_Pacearch_03, Pacearchaeota, Archaea

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169..897
DNA (729bp) protein (243aa)
psmA; proteasome subunit alpha (EC:3.4.25.1); K03432 proteasome alpha subunit [EC:3.4.25.1] Tax=CG_Pacearch_03
Proteasome subunit alpha
Proteasome subunit alpha id=5800797 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized rbh
cg1_0.2_scaffold_10546_c_2
CG_Pacearch_03, Pacearchaeota, Archaea

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944..1618
DNA (675bp) protein (225aa)
Ribosome maturation protein SDO1 homolog n=4 Tax=Methanocaldococcus RepID=SDO1_METJA id=5103843 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome rbh
ribosome maturation protein SBDS-like protein; K14574 ribosome maturation protein SDO1 Tax=CG_Pacearch_03
Ribosome maturation protein SDO1-like protein
cg1_0.2_scaffold_10546_c_3
CG_Pacearch_03, Pacearchaeota, Archaea

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1718..2437
DNA (720bp) protein (240aa)
Probable exosome complex RNA-binding protein 1 n=1 Tax=Pyrococcus kodakaraensis (strain ATCC BAA-918 / JCM 12380 / KOD1) RepID=ECR1_PYRKO id=5103844 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome rbh
RNA-binding protein Rrp4 (containing S1 domain and KH domain) Tax=CG_Pacearch_03
putative exosome complex RNA-binding protein 1
cg1_0.2_scaffold_10546_c_4
CG_Pacearch_03, Pacearchaeota, Archaea

Not on your lists

2439..2813
DNA (375bp) protein (125aa)
Tax=CG_Pacearch_03
cg1_0.2_scaffold_10546_c_5
CG_Pacearch_03, Pacearchaeota, Archaea

Not on your lists

2804..3508
DNA (705bp) protein (235aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00036BC30A rbh
exosome complex exonuclease Rrp41; K11600 exosome complex component RRP41 Tax=CG_Pacearch_03
exosome complex exonuclease Rrp41
cg1_0.2_scaffold_10546_c_6
CG_Pacearch_03, Pacearchaeota, Archaea

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3505..4323
DNA (819bp) protein (273aa)
ribosomal RNA-processing protein RRP42 (EC:3.1.13.-); K12589 exosome complex component RRP42 Tax=CG_Pacearch_03
ribosomal RNA-processing protein RRP42 (EC:3.1.13.-)
cg1_0.2_scaffold_10546_c_7
CG_Pacearch_03, Pacearchaeota, Archaea

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4333..4698
DNA (366bp) protein (122aa)
UPI000021CFC7 related cluster n=1 Tax=unknown RepID=UPI000021CFC7 id=5103847 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome rbh
hypothetical protein
UPI000021CFC7 related cluster Tax=CG_Pacearch_03
cg1_0.2_scaffold_10546_c_8
CG_Pacearch_03, Pacearchaeota, Archaea

Not on your lists

4716..5075
DNA (360bp) protein (120aa)
Tax=CG_Pacearch_03
cg1_0.2_scaffold_10546_c_9
CG_Pacearch_03, Pacearchaeota, Archaea

Not on your lists

5110..6237
DNA (1128bp) protein (376aa)
phosphopyruvate hydratase (EC:4.2.1.11); K01689 enolase [EC:4.2.1.11] Tax=CG_Pacearch_03
phosphopyruvate hydratase (EC:4.2.1.11)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00035E3B39 rbh
cg1_0.2_scaffold_10546_c_10
CG_Pacearch_03, Pacearchaeota, Archaea

Not on your lists


6301..7089
DNA (789bp) protein (263aa)
30S ribosomal protein S2 n=1 Tax=Nanoarchaeum equitans (strain Kin4-M) RepID=RS2_NANEQ id=5102942 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome rbh
30S ribosomal protein S2; K02967 small subunit ribosomal protein S2 Tax=CG_Pacearch_03
30S ribosomal protein S2
cg1_0.2_scaffold_10546_c_11
CG_Pacearch_03, Pacearchaeota, Archaea

Not on your lists

7120..7317
DNA (198bp) protein (66aa)
Tax=CG_Pacearch_03
Displaying 11 items

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