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cg2_3.0_scaffold_2753_c

Search features with annotation key words

Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cg2_3.0_scaffold_2753_c_1
CG_Roizman_01, Roizmanbacteria, Microgenomates, Bacteria

Not on your lists

comp(104..229)
DNA (126bp) protein (42aa)
Tax=CG_Roizman_01
cg2_3.0_scaffold_2753_c_2
CG_Roizman_01, Roizmanbacteria, Microgenomates, Bacteria

Not on your lists

comp(666..977)
DNA (312bp) protein (104aa)
hypothetical protein Tax=CG_Roizman_01
hypothetical protein id=5126 bin=ACD12 species=ACD12 genus=ACD12 taxon_order=ACD12 taxon_class=ACD12 phylum=OP11 tax=ACD12 organism_group=OP11 (Microgenomates) organism_desc= OP11 rbh
cg2_3.0_scaffold_2753_c_3
CG_Roizman_01, Roizmanbacteria, Microgenomates, Bacteria

Not on your lists


comp(1076..2134)
DNA (1059bp) protein (353aa)
DNA-binding/iron metalloprotein/AP endonuclease; K01409 O-sialoglycoprotein endopeptidase [EC:3.4.24.57] Tax=CG_Roizman_01
putative DNA-binding/iron metalloprotein/AP endonuclease (EC:3.4.24.57); K01409 O-sialoglycoprotein endopeptidase [EC:3.4.24.57] id=3938 bin=ACD12 species=ACD12 genus=ACD12 taxon_order=ACD12 taxon_class=ACD12 phylum=OP11 tax=ACD12 organism_group=OP11 (Microgenomates) organism_desc= OP11 rbh
DNA-binding/iron metalloprotein/AP endonuclease
cg2_3.0_scaffold_2753_c_4
CG_Roizman_01, Roizmanbacteria, Microgenomates, Bacteria

Not on your lists

comp(2131..3198)
DNA (1068bp) protein (356aa)
Sua5/YciO/YrdC/YwlC family protein; K07566 tRNA threonylcarbamoyladenosine biosynthesis protein Tax=CG_Roizman_01
SUA5/YciO/YrdC/YwlC family protein; K07566 putative translation factor id=5858 bin=ACD12 species=ACD12 genus=ACD12 taxon_order=ACD12 taxon_class=ACD12 phylum=OP11 tax=ACD12 organism_group=OP11 (Microgenomates) organism_desc= OP11 rbh
Sua5/YciO/YrdC/YwlC family protein
cg2_3.0_scaffold_2753_c_5
CG_Roizman_01, Roizmanbacteria, Microgenomates, Bacteria

Not on your lists

3437..5323
DNA (1887bp) protein (629aa)
ATP-dependent metalloprotease FtsH (EC:3.6.4.3); K03798 cell division protease FtsH [EC:3.4.24.-] Tax=CG_Roizman_01
adg:Adeg_2059 ATP-dependent metalloprotease FtsH (EC:3.6.4.3); K03798 cell division protease FtsH [EC:3.4.24.-] id=3940 bin=ACD12 species=ACD12 genus=ACD12 taxon_order=ACD12 taxon_class=ACD12 phylum=OP11 tax=ACD12 organism_group=OP11 (Microgenomates) organism_desc= OP11 rbh
hypothetical protein
cg2_3.0_scaffold_2753_c_6
CG_Roizman_01, Roizmanbacteria, Microgenomates, Bacteria

Not on your lists

5330..6250
DNA (921bp) protein (307aa)
polA; DNA polymerase I (EC:2.7.7.7) Tax=CG_Roizman_01
polA; DNA polymerase I (EC:2.7.7.7)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2EX13_9BACT rbh
cg2_3.0_scaffold_2753_c_7
CG_Roizman_01, Roizmanbacteria, Microgenomates, Bacteria

Not on your lists

6259..6813
DNA (555bp) protein (185aa)
thermonuclease (EC:3.1.31.1); K01174 micrococcal nuclease [EC:3.1.31.1] Tax=CG_Roizman_01
thermonuclease (EC:3.1.31.1)
Putative N-acetylmuramoyl-L-alanine amidase n=1 Tax=Peptostreptococcus anaerobius 653-L RepID=D3MS15_9FIRM id=35463 bin=ACD30 species=Peptostreptococcus anaerobius genus=Peptostreptococcus taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=ACD30 organism_group=OP11 (Microgenomates) organism_desc=OP11 rbh
cg2_3.0_scaffold_2753_c_8
CG_Roizman_01, Roizmanbacteria, Microgenomates, Bacteria

Not on your lists

comp(6821..7060)
DNA (240bp) protein (80aa)
hypothetical protein, partial n=1 Tax=Parcubacteria bacterium SCGC AAA011-A09 RepID=UPI000368F804 rbh
hypothetical protein Tax=CG_Roizman_01
hypothetical protein
cg2_3.0_scaffold_2753_c_9
CG_Roizman_01, Roizmanbacteria, Microgenomates, Bacteria

Not on your lists

comp(7219..10008)
DNA (2790bp) protein (930aa)
secA; preprotein translocase subunit SecA; K03070 preprotein translocase subunit SecA Tax=CG_Roizman_01
ttr:Tter_0811 preprotein translocase, SecA subunit; K03070 preprotein translocase subunit SecA id=4780 bin=ACD12 species=ACD12 genus=ACD12 taxon_order=ACD12 taxon_class=ACD12 phylum=OP11 tax=ACD12 organism_group=OP11 (Microgenomates) organism_desc= OP11 rbh
secA; preprotein translocase subunit SecA
cg2_3.0_scaffold_2753_c_10
CG_Roizman_01, Roizmanbacteria, Microgenomates, Bacteria

Not on your lists

comp(10023..10739)
DNA (717bp) protein (239aa)
coiled-coil 46..67 Tax=CG_Roizman_01
coiled-coil 46..67 id=5053 bin=ACD12 species=ACD12 genus=ACD12 taxon_order=ACD12 taxon_class=ACD12 phylum=OP11 tax=ACD12 organism_group=OP11 (Microgenomates) organism_desc= OP11 rbh
cg2_3.0_scaffold_2753_c_11
CG_Roizman_01, Roizmanbacteria, Microgenomates, Bacteria

Not on your lists

comp(10740..11168)
DNA (429bp) protein (143aa)
transmembrane_regions 7..24 Tax=CG_Roizman_01
transmembrane_regions 7..24 id=4777 bin=ACD12 species=ACD12 genus=ACD12 taxon_order=ACD12 taxon_class=ACD12 phylum=OP11 tax=ACD12 organism_group=OP11 (Microgenomates) organism_desc= OP11 rbh
cg2_3.0_scaffold_2753_c_12
CG_Roizman_01, Roizmanbacteria, Microgenomates, Bacteria

Not on your lists

comp(11176..12111)
DNA (936bp) protein (312aa)
YjeF-related protein, N-terminal domain n=1 Tax=Thermococcus sp. AM4 RepID=B7R3T5_9EURY id=4781 bin=ACD12 species=Thermococcus sp. AM4 genus=Thermococcus taxon_order=Thermococcales taxon_class=Thermococci phylum=Euryarchaeota tax=ACD12 organism_group=OP11 (Microgenomates) organism_desc= OP11 rbh
hypothetical protein Tax=CG_Roizman_01
hypothetical protein
cg2_3.0_scaffold_2753_c_13
CG_Roizman_01, Roizmanbacteria, Microgenomates, Bacteria

Not on your lists


12162..13973
DNA (1812bp) protein (604aa)
alaS; Alanine--tRNA ligase (EC:6.1.1.7) Tax=CG_Roizman_01
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2F7S7_9BACT rbh
alanyl-tRNA synthetase
cg2_3.0_scaffold_2753_c_14
CG_Roizman_01, Roizmanbacteria, Microgenomates, Bacteria

Not on your lists

13975..14313
DNA (339bp) protein (113aa)
TRNA-binding protein; K06878 tRNA-binding protein Tax=CG_Roizman_01
TRNA-binding protein
cg2_3.0_scaffold_2753_c_15
CG_Roizman_01, Roizmanbacteria, Microgenomates, Bacteria

Not on your lists

14405..15472
DNA (1068bp) protein (356aa)
UPI0003D007B1 related cluster n=1 Tax=unknown RepID=UPI0003D007B1 rbh
hypothetical protein
UPI0003D007B1 related cluster Tax=CG_Roizman_01
cg2_3.0_scaffold_2753_c_16
CG_Roizman_01, Roizmanbacteria, Microgenomates, Bacteria

Not on your lists

comp(15628..16089)
DNA (462bp) protein (154aa)
Transcription elongation factor GreA n=1 Tax=uncultured bacterium RepID=K2E633_9BACT rbh
transcription elongation factor; K03624 transcription elongation factor GreA Tax=CG_Roizman_01
transcription elongation factor
cg2_3.0_scaffold_2753_c_trna_1
unknown

Not on your lists

16383..16454
DNA (72bp)
transferRNA
cg2_3.0_scaffold_2753_c_17
CG_Roizman_01, Roizmanbacteria, Microgenomates, Bacteria

Not on your lists

comp(16417..17055)
DNA (639bp) protein (213aa)
hypothetical protein Tax=CG_Roizman_01
integral membrane protein
cg2_3.0_scaffold_2753_c_18
GWC2_OP11_42_8, Gottesmanbacteria, Microgenomates, Bacteria

Not on your lists

comp(17068..17217)
DNA (150bp) protein (50aa)
Transposase IS3/IS911 family protein {ECO:0000313|EMBL:KKS76496.1}; TaxID=1618451 species="Bacteria; Microgenomates.;" source="Microgenomates (Gottesmanbacteria) bacterium GW2011_GWC2_42_8.;"
Displaying 19 items

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