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cg2_3.0_scaffold_1161_c

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Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cg2_3.0_scaffold_1161_c_1
GWA1_OD1_51_14_curated, Parcubacteria, Bacteria

Not on your lists

3..254
DNA (252bp) protein (84aa)
Tax=GWA1_OD1_51_14_curated
cg2_3.0_scaffold_1161_c_trna_2
unknown

Not on your lists

comp(219..305)
DNA (87bp)
transferRNA
cg2_3.0_scaffold_1161_c_2
CG_CPR12_01, CG_CPR12, Bacteria

Not on your lists

comp(499..729)
DNA (231bp) protein (77aa)
Tax=CG_CPR12_01
cg2_3.0_scaffold_1161_c_3
CG_CPR12_01, CG_CPR12, Bacteria

Not on your lists

comp(1082..3889)
DNA (2808bp) protein (936aa)
N-acetylmuramoyl-L-alanine amidase family 2 n=1 Tax=uncultured bacterium RepID=K2AR78_9BACT rbh
N-acetylmuramoyl-L-alanine amidase family 2 protein Tax=CG_CPR12_01
N-acetylmuramoyl-L-alanine amidase family 2 protein
cg2_3.0_scaffold_1161_c_4
CG_CPR12_01, CG_CPR12, Bacteria

Not on your lists

comp(3907..4950)
DNA (1044bp) protein (348aa)
RARB Retinoic acid receptor beta Tax=CG_CPR12_01
cg2_3.0_scaffold_1161_c_5
CG_CPR12_01, CG_CPR12, Bacteria

Not on your lists

comp(5045..6370)
DNA (1326bp) protein (442aa)
Inorganic carbon transporter Tax=CG_CPR12_01
cg2_3.0_scaffold_1161_c_6
CG_CPR12_01, CG_CPR12, Bacteria

Not on your lists

comp(6380..7819)
DNA (1440bp) protein (480aa)
polysaccharide biosynthesis protein Tax=CG_CPR12_01
polysaccharide biosynthesis protein
cg2_3.0_scaffold_1161_c_7
CG_CPR12_01, CG_CPR12, Bacteria

Not on your lists

comp(7856..8086)
DNA (231bp) protein (77aa)
Tax=CG_CPR12_01
cg2_3.0_scaffold_1161_c_8
CG_CPR12_01, CG_CPR12, Bacteria

Not on your lists

8101..8481
DNA (381bp) protein (127aa)
Tax=CG_CPR12_01
cg2_3.0_scaffold_1161_c_9
CG_CPR12_01, CG_CPR12, Bacteria

Not on your lists

8793..8954
DNA (162bp) protein (54aa)
Tax=CG_CPR12_01
cg2_3.0_scaffold_1161_c_10
CG_CPR12_01, CG_CPR12, Bacteria

Not on your lists

comp(9260..9868)
DNA (609bp) protein (203aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2F0Z9_9BACT rbh
PaaX family transcrtiptional regulator Tax=CG_CPR12_01
PaaX family transcrtiptional regulator
cg2_3.0_scaffold_1161_c_11
CG_CPR12_01, CG_CPR12, Bacteria

Not on your lists

comp(10004..11863)
DNA (1860bp) protein (620aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA011-N16 RepID=UPI0003B36C6F rbh
VanW family protein Tax=CG_CPR12_01
VanW family protein
cg2_3.0_scaffold_1161_c_12
CG_CPR12_01, CG_CPR12, Bacteria

Not on your lists

comp(11856..12062)
DNA (207bp) protein (69aa)
Tax=CG_CPR12_01
cg2_3.0_scaffold_1161_c_13
CG_CPR12_01, CG_CPR12, Bacteria

Not on your lists

comp(12171..12710)
DNA (540bp) protein (180aa)
hypothetical protein Tax=CG_CPR12_01
hypothetical protein id=5801496 bin=GWE2_OD1_42_8 species=GW2011_OD1_1 genus=GW2011_OD1_1 taxon_order=GW2011_OD1_1 taxon_class=GW2011_OD1_1 phylum=OD1 tax=GWE2_OD1_42_8 organism_group=OD1 (Parcubacteria) organism_desc=GW2011_OD1_1 GW2011_A rbh
heat-shock protein Hsp20
cg2_3.0_scaffold_1161_c_14
CG_CPR12_01, CG_CPR12, Bacteria

Not on your lists

comp(12796..14715)
DNA (1920bp) protein (640aa)
ftsH; cell division protein FtsH (EC:3.4.24.-); K03798 cell division protease FtsH [EC:3.4.24.-] Tax=CG_CPR12_01
ftsH; cell division protein FtsH (EC:3.4.24.-)
hypothetical protein id=5801625 bin=GWE2_OD1_42_8 species=GW2011_OD1_1 genus=GW2011_OD1_1 taxon_order=GW2011_OD1_1 taxon_class=GW2011_OD1_1 phylum=OD1 tax=GWE2_OD1_42_8 organism_group=OD1 (Parcubacteria) organism_desc=GW2011_OD1_1 GW2011_A rbh
cg2_3.0_scaffold_1161_c_15
CG_CPR12_01, CG_CPR12, Bacteria

Not on your lists


comp(14798..16072)
DNA (1275bp) protein (425aa)
rpfA; 30S ribosomal protein S1 Tax=CG_CPR12_01
30S ribosomal protein S1
cg2_3.0_scaffold_1161_c_16
CG_CPR12_01, CG_CPR12, Bacteria

Not on your lists

16378..17022
DNA (645bp) protein (215aa)
Tax=CG_CPR12_01
cg2_3.0_scaffold_1161_c_17
CG_CPR12_01, CG_CPR12, Bacteria

Not on your lists

17232..17891
DNA (660bp) protein (220aa)
Zn-dependent hydrolase of the beta-lactamase fold-like protein Tax=CG_CPR12_01
hypothetical protein id=5801628 bin=GWE2_OD1_42_8 species=GW2011_OD1_1 genus=GW2011_OD1_1 taxon_order=GW2011_OD1_1 taxon_class=GW2011_OD1_1 phylum=OD1 tax=GWE2_OD1_42_8 organism_group=OD1 (Parcubacteria) organism_desc=GW2011_OD1_1 GW2011_A rbh
Zn-dependent hydrolase of the beta-lactamase fold-like protein
cg2_3.0_scaffold_1161_c_18
CG_CPR12_01, CG_CPR12, Bacteria

Not on your lists

17898..18296
DNA (399bp) protein (133aa)
Tax=CG_CPR12_01
cg2_3.0_scaffold_1161_c_19
CG_CPR12_01, CG_CPR12, Bacteria

Not on your lists


18315..20774
DNA (2460bp) protein (820aa)
DNA gyrase subunit A (EC:5.99.1.3); K02469 DNA gyrase subunit A [EC:5.99.1.3] Tax=CG_CPR12_01
DNA gyrase subunit A (EC:5.99.1.3)
DNA gyrase subunit A n=1 Tax=uncultured bacterium RepID=K2BXY5_9BACT rbh
cg2_3.0_scaffold_1161_c_20
RBG_13_OD1_Falkowbacteria_36_9_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

20940..21203
DNA (264bp) protein (88aa)
rpmF; 50S ribosomal protein L32; K02911 large subunit ribosomal protein L32 Tax=RBG_13_OD1_Falkowbacteria_36_9_curated
hypothetical protein id=5801633 bin=GWE2_OD1_42_8 species=GW2011_OD1_1 genus=GW2011_OD1_1 taxon_order=GW2011_OD1_1 taxon_class=GW2011_OD1_1 phylum=OD1 tax=GWE2_OD1_42_8 organism_group=OD1 (Parcubacteria) organism_desc=GW2011_OD1_1 GW2011_A rbh
cg2_3.0_scaffold_1161_c_21
CG_CPR12_01, CG_CPR12, Bacteria

Not on your lists

21266..21727
DNA (462bp) protein (154aa)
putative transcription termination factor Tax=CG_CPR12_01
nusB; transcription antitermination factor NusB; K03625 N utilization substance protein B id=56857 bin=ACD43 species=ACD43 genus=ACD43 taxon_order=ACD43 taxon_class=ACD43 phylum=OD1 tax=ACD43 organism_group=OD1 (Parcubacteria) organism_desc=OD1 rbh
putative transcription termination factor
cg2_3.0_scaffold_1161_c_22
CG_CPR12_01, CG_CPR12, Bacteria

Not on your lists

21782..22477
DNA (696bp) protein (232aa)
putative ribonuclease III (EC:3.1.26.3) Tax=CG_CPR12_01
putative ribonuclease III (EC:3.1.26.3)
cg2_3.0_scaffold_1161_c_23
CG_CPR12_01, CG_CPR12, Bacteria

Not on your lists

22647..23690
DNA (1044bp) protein (348aa)
twitching motility protein; K02669 twitching motility protein PilT Tax=CG_CPR12_01
hypothetical protein id=5801361 bin=GWE2_OD1_42_8 species=GW2011_OD1_1 genus=GW2011_OD1_1 taxon_order=GW2011_OD1_1 taxon_class=GW2011_OD1_1 phylum=OD1 tax=GWE2_OD1_42_8 organism_group=OD1 (Parcubacteria) organism_desc=GW2011_OD1_1 GW2011_A rbh
twitching motility protein
cg2_3.0_scaffold_1161_c_24
CG_CPR12_01, CG_CPR12, Bacteria

Not on your lists

23702..24652
DNA (951bp) protein (317aa)
Tax=CG_CPR12_01
cg2_3.0_scaffold_1161_c_25
CG_CPR12_01, CG_CPR12, Bacteria

Not on your lists

comp(24763..26556)
DNA (1794bp) protein (598aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2B176_9BACT rbh
GTP-binding protein TypA/BipA Tax=CG_CPR12_01
GTP-binding protein TypA/BipA
cg2_3.0_scaffold_1161_c_trna_1
unknown

Not on your lists

26689..26774
DNA (86bp)
transferRNA
cg2_3.0_scaffold_1161_c_26
R_RIF_OD1_02_44_20, RIF-OD1-2, Parcubacteria, Bacteria

Not on your lists

comp(26709..26960)
DNA (252bp) protein (84aa)
recombinase Tax=RIFCSPLOWO2_02_FULL_RIF_OD1_02_44_20_curated
Displaying 28 items

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