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cg_0.2_sub10_scaffold_602_c

Search features with annotation key words

Displaying 29 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cg_0.2_sub10_scaffold_602_c_1
CG_Pacearch_06, Pacearchaeota, Archaea

Not on your lists

2..499
DNA (498bp) protein (166aa)
Uncharacterized protein Tax=CG_Pacearch_06
Uncharacterized protein id=5800496 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
hypothetical protein
cg_0.2_sub10_scaffold_602_c_2
unknown

Not on your lists

509..727
DNA (219bp) protein (73aa)

This feature has no annotations

cg_0.2_sub10_scaffold_602_c_3
CG_Pacearch_06, Pacearchaeota, Archaea

Not on your lists

673..858
DNA (186bp) protein (62aa)
Tax=CG_Pacearch_06
cg_0.2_sub10_scaffold_602_c_4
CG_Pacearch_06, Pacearchaeota, Archaea

Not on your lists


900..1160
DNA (261bp) protein (87aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI0003600E98
50S ribosomal protein L21e; K02889 large subunit ribosomal protein L21e Tax=CG_Pacearch_06
rpl21E; 50S ribosomal protein L21e
cg_0.2_sub10_scaffold_602_c_5
CG_Pacearch_06, Pacearchaeota, Archaea

Not on your lists

1157..1459
DNA (303bp) protein (101aa)
Tax=CG_Pacearch_06
cg_0.2_sub10_scaffold_602_c_6
CG_Pacearch_06, Pacearchaeota, Archaea

Not on your lists

1462..2001
DNA (540bp) protein (180aa)
hypothetical protein; K07572 putative nucleotide binding protein Tax=CG_Pacearch_06
hypothetical protein; K07572 putative nucleotide binding protein id=5051518 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
DNA-binding protein
cg_0.2_sub10_scaffold_602_c_7
CG_Pacearch_06, Pacearchaeota, Archaea

Not on your lists


2003..2479
DNA (477bp) protein (159aa)
30S ribosomal protein S13 n=1 Tax=Nanoarchaeum equitans (strain Kin4-M) RepID=RS13_NANEQ id=5103690 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
rps13p; 30S ribosomal protein S13; K02952 small subunit ribosomal protein S13 Tax=CG_Pacearch_06
30S ribosomal protein S13
cg_0.2_sub10_scaffold_602_c_8
CG_Pacearch_06, Pacearchaeota, Archaea

Not on your lists


2482..2988
DNA (507bp) protein (169aa)
30S ribosomal protein S4; K02986 small subunit ribosomal protein S4 Tax=CG_Pacearch_06
30S ribosomal protein S4 id=4922289 bin=PER_GWC2_41_7 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=PER_GWC2_41_7 organism_group=PER (Peregrinibacteria)
30S ribosomal protein S4
cg_0.2_sub10_scaffold_602_c_9
CG_Pacearch_06, Pacearchaeota, Archaea

Not on your lists


2981..3439
DNA (459bp) protein (153aa)
30S ribosomal protein S11 n=1 Tax=Ferroglobus placidus (strain DSM 10642 / AEDII12DO) RepID=D3RX01_FERPA rbh
30S ribosomal protein S11; K02948 small subunit ribosomal protein S11 Tax=CG_Pacearch_06
SSU ribosomal protein S14e (S11p)
cg_0.2_sub10_scaffold_602_c_10
CG_Pacearch_06, Pacearchaeota, Archaea

Not on your lists

3464..4162
DNA (699bp) protein (233aa)
rpoD; DNA-directed RNA polymerase subunit D (EC:2.7.7.6); K03047 DNA-directed RNA polymerase subunit D [EC:2.7.7.6] Tax=CG_Pacearch_06
DNA-directed RNA polymerase subunit D n=1 Tax=Methanocella conradii (strain DSM 24694 / JCM 17849 / CGMCC 1.5162 / HZ254) RepID=H8I735_METCZ id=5103687 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
DNA-directed RNA polymerase subunit D
cg_0.2_sub10_scaffold_602_c_trna_1
unknown

Not on your lists

4163..4246
DNA (84bp)
transferRNA
cg_0.2_sub10_scaffold_602_c_11
CG_Pacearch_06, Pacearchaeota, Archaea

Not on your lists


4256..4624
DNA (369bp) protein (123aa)
50S ribosomal protein L18e n=1 Tax=Methanosaeta thermophila (strain DSM 6194 / PT) RepID=A0B6F0_METTP rbh
50S ribosomal protein L18e; K02883 large subunit ribosomal protein L18e Tax=CG_Pacearch_06
50S ribosomal protein L18e
cg_0.2_sub10_scaffold_602_c_12
CG_Pacearch_06, Pacearchaeota, Archaea

Not on your lists


4621..5022
DNA (402bp) protein (134aa)
50S ribosomal protein L13P n=10 Tax=Thermococcus RepID=RL13_PYRKO id=5103680 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
ribosomal protein L13; K02871 large subunit ribosomal protein L13 Tax=CG_Pacearch_06
50S ribosomal protein L13P
cg_0.2_sub10_scaffold_602_c_13
CG_Pacearch_06, Pacearchaeota, Archaea

Not on your lists


5022..5423
DNA (402bp) protein (134aa)
30S ribosomal protein S9 n=1 Tax=Ferroglobus placidus (strain DSM 10642 / AEDII12DO) RepID=D3S037_FERPA rbh
30S ribosomal protein S9; K02996 small subunit ribosomal protein S9 Tax=CG_Pacearch_06
30S ribosomal protein S9
cg_0.2_sub10_scaffold_602_c_14
CG_Pacearch_06, Pacearchaeota, Archaea

Not on your lists

comp(5424..6230)
DNA (807bp) protein (269aa)
integrase family protein n=1 Tax=Anaerophaga thermohalophila DSM 12881 RepID=UPI000237D181 id=5103180 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
tyrosine type site-specific recombinase Tax=CG_Pacearch_06
integrase family protein
cg_0.2_sub10_scaffold_602_c_15
CG_Pacearch_06, Pacearchaeota, Archaea

Not on your lists

comp(6308..6757)
DNA (450bp) protein (150aa)
Tax=CG_Pacearch_06
cg_0.2_sub10_scaffold_602_c_16
CG_Pacearch_06, Pacearchaeota, Archaea

Not on your lists

comp(6745..7905)
DNA (1161bp) protein (387aa)
Tax=CG_Pacearch_06
cg_0.2_sub10_scaffold_602_c_17
CG_Pacearch_06, Pacearchaeota, Archaea

Not on your lists

8037..8498
DNA (462bp) protein (154aa)
Peptidyl-prolyl cis-trans isomerase n=1 Tax=Methanohalophilus mahii (strain ATCC 35705 / DSM 5219 / SLP) RepID=D5EA05_METMS rbh
peptidylprolyl isomerase FKBP-type Tax=CG_Pacearch_06
peptidylprolyl isomerase FKBP-type
cg_0.2_sub10_scaffold_602_c_18
CG_Pacearch_06, Pacearchaeota, Archaea

Not on your lists

8523..8744
DNA (222bp) protein (74aa)
DNA-directed RNA polymerase I, II, and III, 7.3 kDa polypeptide; K00960 DNA-directed RNA polymerase [EC:2.7.7.6] Tax=CG_Pacearch_06
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00037944A6
hypothetical protein
cg_0.2_sub10_scaffold_602_c_19
CG_Pacearch_06, Pacearchaeota, Archaea

Not on your lists

8795..10390
DNA (1596bp) protein (532aa)
RecJ-like exonuclease (DnaJ-type Zn finger protein); K07463 archaea-specific RecJ-like exonuclease Tax=CG_Pacearch_06
RecJ-like exonuclease (DnaJ-type Zn finger protein) id=3795705 bin=GWF2_Lentisphaerae_38_69 species=Desulfobacterium autotrophicum genus=Desulfobacterium taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Lentisphaerae_38_69 organism_group=Lentisphaerae organism_desc=a349
RecJ-like exonuclease (DnaJ-type Zn finger protein)
cg_0.2_sub10_scaffold_602_c_20
CG_Pacearch_06, Pacearchaeota, Archaea

Not on your lists

comp(10397..10942)
DNA (546bp) protein (182aa)
Tax=CG_Pacearch_06
cg_0.2_sub10_scaffold_602_c_21
CG_Pacearch_06, Pacearchaeota, Archaea

Not on your lists

comp(10997..11536)
DNA (540bp) protein (180aa)
Tax=CG_Pacearch_06
cg_0.2_sub10_scaffold_602_c_22
CG_Pacearch_06, Pacearchaeota, Archaea

Not on your lists

comp(11576..11860)
DNA (285bp) protein (95aa)
Tax=CG_Pacearch_06
cg_0.2_sub10_scaffold_602_c_23
unknown

Not on your lists

comp(11867..12028)
DNA (162bp) protein (54aa)

This feature has no annotations

cg_0.2_sub10_scaffold_602_c_24
CG_Pacearch_06, Pacearchaeota, Archaea

Not on your lists

comp(12067..12318)
DNA (252bp) protein (84aa)
Uncharacterized protein n=1 Tax=Ferroplasma sp. Type II RepID=T0NH92_9EURY rbh
RelE protein; K06218 RelE protein Tax=CG_Pacearch_06
putative RelE protein
cg_0.2_sub10_scaffold_602_c_25
CG_Pacearch_06, Pacearchaeota, Archaea

Not on your lists

comp(12319..12540)
DNA (222bp) protein (74aa)
Uncharacterized protein n=1 Tax=Ferroplasma sp. Type II RepID=T0M7E8_9EURY rbh
hypothetical protein Tax=CG_Pacearch_06
hypothetical protein
cg_0.2_sub10_scaffold_602_c_26
CG_Pacearch_06, Pacearchaeota, Archaea

Not on your lists

12660..13445
DNA (786bp) protein (262aa)
hypothetical protein
id=3230410 Tax=CG_Pacearch_06
id=3230410 bin=GWB1_KAZAN_52_7 species=GWC1_KAZAN_52_13 genus=GWC1_KAZAN_52_13 taxon_order=GWC1_KAZAN_52_13 taxon_class=GWC1_KAZAN_52_13 phylum=KAZAN tax=GWB1_KAZAN_52_7 organism_group=Kazan
cg_0.2_sub10_scaffold_602_c_27
CG_Pacearch_06, Pacearchaeota, Archaea

Not on your lists

13424..13597
DNA (174bp) protein (58aa)
Tax=CG_Pacearch_06
cg_0.2_sub10_scaffold_602_c_28
CG_Pacearch_06, Pacearchaeota, Archaea

Not on your lists

13740..17417
DNA (3678bp) protein (1226aa)
hypothetical protein Tax=CG_Pacearch_06
hypothetical protein id=5803292 bin=OD1_GWC2_34_28 species=ACD9 genus=ACD9 taxon_order=ACD9 taxon_class=ACD9 phylum=OD1-i tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
hypothetical protein
Displaying 29 items

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