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cg_0.2_sub10_scaffold_171_c

Search features with annotation key words

Displaying items 1-30 of 38 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cg_0.2_sub10_scaffold_171_c_1
CG_Levy_01, Levybacteria, Microgenomates, Bacteria

Not on your lists

comp(1..303)
DNA (303bp) protein (101aa)
Tax=CG_Levy_01
cg_0.2_sub10_scaffold_171_c_2
CG_Levy_01, Levybacteria, Microgenomates, Bacteria

Not on your lists

comp(321..1277)
DNA (957bp) protein (319aa)
transmembrane_regions 20..39 Tax=CG_Levy_01
transmembrane_regions 20..39 id=42310 bin=ACD37 species=ACD37 genus=ACD37 taxon_order=ACD37 taxon_class=ACD37 phylum=OP11 tax=ACD37 organism_group=OP11 (Microgenomates) organism_desc=OP11
cg_0.2_sub10_scaffold_171_c_3
CG_Levy_01, Levybacteria, Microgenomates, Bacteria

Not on your lists

1408..1581
DNA (174bp) protein (58aa)
Tax=CG_Levy_01
cg_0.2_sub10_scaffold_171_c_4
CG_Levy_01, Levybacteria, Microgenomates, Bacteria

Not on your lists

1664..2968
DNA (1305bp) protein (435aa)
Tax=CG_Levy_01
cg_0.2_sub10_scaffold_171_c_5
CG_Levy_01, Levybacteria, Microgenomates, Bacteria

Not on your lists

3000..4100
DNA (1101bp) protein (367aa)
hypothetical protein n=1 Tax=Candidatus Microgenomatus auricola SCGC AAA011-E14 RepID=UPI0003645CB0
putative DNA processing protein; K04096 DNA processing protein Tax=CG_Levy_01
putative DNA processing protein
cg_0.2_sub10_scaffold_171_c_6
CG_Levy_01, Levybacteria, Microgenomates, Bacteria

Not on your lists

comp(4128..5693)
DNA (1566bp) protein (522aa)
putative formate hydrogenlyase large subunit (EC:1.12.7.2) Tax=CG_Levy_01
putative formate hydrogenlyase large subunit (EC:1.12.7.2)
Putative Formate hydrogenlyase, large subunit id=4453924 bin=GWF2_Lentisphaerae_38_69 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWF2_Lentisphaerae_38_69 organism_group=Lentisphaerae organism_desc=a349
cg_0.2_sub10_scaffold_171_c_7
CG_Levy_01, Levybacteria, Microgenomates, Bacteria

Not on your lists

comp(5715..7163)
DNA (1449bp) protein (483aa)
hydrogenase, membrane subunit 1-like protein (EchA-like); K12141 hydrogenase-4 component F [EC:1.-.-.-] Tax=CG_Levy_01
Strongly similar to membrane-bound [NiFe]-hydrogenase-4, subunit F n=1 Tax=uncultured bacterium RepID=K1YLH4_9BACT
formate hydrogenlyase subunit 3/multisubunit Na+/H+ antiporter, MnhD subunit
cg_0.2_sub10_scaffold_171_c_8
CG_Levy_01, Levybacteria, Microgenomates, Bacteria

Not on your lists

comp(7165..7806)
DNA (642bp) protein (214aa)
hydrogenase 4 membrane component (E); K12140 hydrogenase-4 component E [EC:1.-.-.-] Tax=CG_Levy_01
Hydrogenase 4 membrane component (E) id=4453920 bin=GWF2_Lentisphaerae_38_69 species=unknown genus=Sulfurihydrogenibium taxon_order=Aquificales taxon_class=Aquificae phylum=Aquificae tax=GWF2_Lentisphaerae_38_69 organism_group=Lentisphaerae organism_desc=a349
hydrogenase 4 membrane component (E)
cg_0.2_sub10_scaffold_171_c_9
CG_Levy_01, Levybacteria, Microgenomates, Bacteria

Not on your lists

comp(7808..8737)
DNA (930bp) protein (310aa)
hycD; membrane-bound [NiFe]-hydrogenase-3, subunit D Tax=CG_Levy_01
Similar to membrane-bound [NiFe]-hydrogenase-3, subunit D id=4453918 bin=GWF2_Lentisphaerae_38_69 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Lentisphaerae_38_69 organism_group=Lentisphaerae organism_desc=a349
hycD; membrane-bound [NiFe]-hydrogenase-3, subunit D
cg_0.2_sub10_scaffold_171_c_10
CG_Levy_01, Levybacteria, Microgenomates, Bacteria

Not on your lists

comp(8739..10766)
DNA (2028bp) protein (676aa)
formate hydrogenlyase subunit 3/multisubunit Na+/H+ antiporter, MnhD subunit; K12137 hydrogenase-4 component B [EC:1.-.-.-] Tax=CG_Levy_01
Formate hydrogenlyase subunit 3/multisubunit Na+/H+ antiporter, MnhD subunit id=4453916 bin=GWF2_Lentisphaerae_38_69 species=Desulfosporosinus youngiae genus=Desulfosporosinus taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Lentisphaerae_38_69 organism_group=Lentisphaerae organism_desc=a349
formate hydrogenlyase subunit 3/multisubunit Na+/H+ antiporter, MnhD subunit
cg_0.2_sub10_scaffold_171_c_11
CG_Levy_01, Levybacteria, Microgenomates, Bacteria

Not on your lists

comp(10773..11312)
DNA (540bp) protein (180aa)
Ni,Fe-hydrogenase III small subunit Tax=CG_Levy_01
Putative formate hydrogenlyase subunit 7 id=4453913 bin=GWF2_Lentisphaerae_38_69 species=Bradyrhizobium japonicum genus=Bradyrhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF2_Lentisphaerae_38_69 organism_group=Lentisphaerae organism_desc=a349
hydrogenase, group 4, HycG subunit, putative
cg_0.2_sub10_scaffold_171_c_12
CG_Levy_01, Levybacteria, Microgenomates, Bacteria

Not on your lists


11658..12185
DNA (528bp) protein (176aa)
50S ribosomal protein L10; K02864 large subunit ribosomal protein L10 Tax=CG_Levy_01
50S ribosomal protein L10 ; K02864 large subunit ribosomal protein L10 id=5085002 bin=GWA2_OP11_43_14 species=GWA2_OP11 genus=GWA2_OP11 taxon_order=GWA2_OP11 taxon_class=GWA2_OP11 phylum=OP11 tax=GWA2_OP11_43_14 organism_group=OP11 (Microgenomates) organism_desc=GWA2_OP11_2
50S ribosomal protein L10
cg_0.2_sub10_scaffold_171_c_13
CG_Levy_01, Levybacteria, Microgenomates, Bacteria

Not on your lists


12272..12664
DNA (393bp) protein (131aa)
rplL; 50S ribosomal protein L7/L12; K02935 large subunit ribosomal protein L7/L12 Tax=CG_Levy_01
rplL; 50S ribosomal protein L7/L12; K02935 large subunit ribosomal protein L7/L12 id=5085001 bin=GWA2_OP11_43_14 species=GWA2_OP11 genus=GWA2_OP11 taxon_order=GWA2_OP11 taxon_class=GWA2_OP11 phylum=OP11 tax=GWA2_OP11_43_14 organism_group=OP11 (Microgenomates) organism_desc=GWA2_OP11_2
rplL; 50S ribosomal protein L7/L12
cg_0.2_sub10_scaffold_171_c_14
CG_Levy_01, Levybacteria, Microgenomates, Bacteria

Not on your lists

13011..13631
DNA (621bp) protein (207aa)
seg 14..28 Tax=CG_Levy_01
seg 14..28 id=133178 bin=ACD81 species=ACD81 genus=ACD81 taxon_order=ACD81 taxon_class=ACD81 phylum=OD1 tax=ACD81 organism_group=OD1 (Parcubacteria) organism_desc=OD1
cg_0.2_sub10_scaffold_171_c_15
CG_Levy_01, Levybacteria, Microgenomates, Bacteria

Not on your lists

comp(13621..14655)
DNA (1035bp) protein (345aa)
ribose-phosphate pyrophosphokinase (EC:2.7.6.1); K00948 ribose-phosphate pyrophosphokinase [EC:2.7.6.1] Tax=CG_Levy_01
ribose-phosphate pyrophosphokinase (EC:2.7.6.1)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2CVF0_9BACT
cg_0.2_sub10_scaffold_171_c_16
CG_Levy_01, Levybacteria, Microgenomates, Bacteria

Not on your lists


14812..15072
DNA (261bp) protein (87aa)
rpmB; ribosomal protein L28; K02902 large subunit ribosomal protein L28 Tax=CG_Levy_01
LSU ribosomal protein l28p; K02902 large subunit ribosomal protein L28 id=41349 bin=ACD37 species=ACD37 genus=ACD37 taxon_order=ACD37 taxon_class=ACD37 phylum=OP11 tax=ACD37 organism_group=OP11 (Microgenomates) organism_desc=OP11
rpmB; ribosomal protein L28
cg_0.2_sub10_scaffold_171_c_17
CG_Levy_01, Levybacteria, Microgenomates, Bacteria

Not on your lists

comp(15109..15942)
DNA (834bp) protein (278aa)
methionyl-tRNA formyltransferase; K00604 methionyl-tRNA formyltransferase [EC:2.1.2.9] Tax=CG_Levy_01
hypothetical protein n=1 Tax=Candidatus Microgenomatus auricola SCGC AAA011-E14 RepID=UPI000366108B
fmt; Fmt
cg_0.2_sub10_scaffold_171_c_18
CG_Levy_01, Levybacteria, Microgenomates, Bacteria

Not on your lists

16005..17087
DNA (1083bp) protein (361aa)
Tax=CG_Levy_01
cg_0.2_sub10_scaffold_171_c_19
CG_Levy_01, Levybacteria, Microgenomates, Bacteria

Not on your lists

comp(17101..17589)
DNA (489bp) protein (163aa)
Tax=CG_Levy_01
cg_0.2_sub10_scaffold_171_c_20
CG_Levy_01, Levybacteria, Microgenomates, Bacteria

Not on your lists

comp(17593..18171)
DNA (579bp) protein (193aa)
peptide deformylase; K01462 peptide deformylase [EC:3.5.1.88] Tax=CG_Levy_01
def; Peptide deformylase (EC:3.5.1.88)
hypothetical protein n=1 Tax=Candidatus Microgenomatus auricola SCGC AAA011-E14 RepID=UPI00037099DB
cg_0.2_sub10_scaffold_171_c_21
CG_Levy_01, Levybacteria, Microgenomates, Bacteria

Not on your lists

comp(18211..20538)
DNA (2328bp) protein (776aa)
hypothetical protein Tax=CG_Levy_01
tetratricopeptide repeat domain protein id=72824 bin=ACD50 species=ACD50 genus=ACD50 taxon_order=ACD50 taxon_class=ACD50 phylum=OP11 tax=ACD50 organism_group=OP11 (Microgenomates) organism_desc=OP11
hypothetical protein
cg_0.2_sub10_scaffold_171_c_22
CG_Levy_01, Levybacteria, Microgenomates, Bacteria

Not on your lists

20760..21941
DNA (1182bp) protein (394aa)
MreB/Mrl family cell shape determining protein; K03569 rod shape-determining protein MreB and related proteins Tax=CG_Levy_01
dae:Dtox_3339 rod shape-determining protein MreB; K03569 rod shape-determining protein MreB and related proteins id=42373 bin=ACD37 species=ACD37 genus=ACD37 taxon_order=ACD37 taxon_class=ACD37 phylum=OP11 tax=ACD37 organism_group=OP11 (Microgenomates) organism_desc=OP11
MreB/Mrl family cell shape determining protein
cg_0.2_sub10_scaffold_171_c_23
CG_Levy_01, Levybacteria, Microgenomates, Bacteria

Not on your lists

21970..22665
DNA (696bp) protein (232aa)
Tax=CG_Levy_01
cg_0.2_sub10_scaffold_171_c_24
CG_Levy_01, Levybacteria, Microgenomates, Bacteria

Not on your lists

22763..23749
DNA (987bp) protein (329aa)
ampC; beta-lactamase (EC:3.5.2.6) Tax=CG_Levy_01
Beta-lactamase n=1 Tax=Acidaminococcus sp. D21 RepID=C0WEF8_9FIRM id=35918 bin=ACD30 species=Acidaminococcus sp. D21 genus=Acidaminococcus taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=ACD30 organism_group=OP11 (Microgenomates) organism_desc=OP11
beta-lactamase
cg_0.2_sub10_scaffold_171_c_25
CG_Levy_01, Levybacteria, Microgenomates, Bacteria

Not on your lists

comp(23962..24789)
DNA (828bp) protein (276aa)
Tax=CG_Levy_01
cg_0.2_sub10_scaffold_171_c_16S_1
unknown

Not on your lists

25265..28011
DNA (2747bp)
cg_0.2_sub10_scaffold_171_c_26
CG_Levy_01, Levybacteria, Microgenomates, Bacteria

Not on your lists

25368..25634
DNA (267bp) protein (89aa)
excinuclease ABC c subunit domain protein; K07461 putative endonuclease Tax=CG_Levy_01
excinuclease ABC C subunit domain protein; K07461 putative endonuclease id=137548 bin=ACD9 species=ACD9 genus=ACD9 taxon_order=ACD9 taxon_class=ACD9 phylum=OD1-i tax=ACD9 organism_group=OD1-i organism_desc=OD1-i
excinuclease ABC c subunit domain protein
cg_0.2_sub10_scaffold_171_c_27
CG_Levy_01, Levybacteria, Microgenomates, Bacteria

Not on your lists

27380..27868
DNA (489bp) protein (163aa)
orf403; orf403 Tax=CG_Levy_01
Orf933 id=2787857 bin=GWA1_Kazan_50_15 species=Peltigera malacea genus=Peltigera taxon_order=Peltigerales taxon_class=Lecanoromycetes phylum=Ascomycota tax=GWA1_Kazan_50_15 organism_group=Kazan organism_desc=Probably Kazan: candidate for curation
orf403; orf403
cg_0.2_sub10_scaffold_171_c_28
CG_Levy_01, Levybacteria, Microgenomates, Bacteria

Not on your lists

28287..29126
DNA (840bp) protein (280aa)
Tax=CG_Levy_01
cg_0.2_sub10_scaffold_171_c_29
CG_Levy_01, Levybacteria, Microgenomates, Bacteria

Not on your lists

comp(29285..32719)
DNA (3435bp) protein (1145aa)
hypothetical protein n=1 Tax=Actinomycetospora chiangmaiensis RepID=UPI00037B16D8
hypothetical protein Tax=CG_Levy_01
Displaying items 1-30 of 38 in total

View Taxonomy