ggKbase home page

cg_0.2_sub10_scaffold_1338_c

Search features with annotation key words

Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cg_0.2_sub10_scaffold_1338_c_1
GWD1_OD1_44_10_partial, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(35..1711)
DNA (1677bp) protein (559aa)
Uncharacterized protein {ECO:0000313|EMBL:KKT30213.1}; TaxID=1618757 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Nomurabacteria) bacterium GW2011_GWD1_44_10.;"
pilB1; type IV-A pilus assembly ATPase PilB; K02652 type IV pilus assembly protein PilB id=5803215 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
hypothetical protein
cg_0.2_sub10_scaffold_1338_c_2
unknown

Not on your lists

1728..1832
DNA (105bp) protein (35aa)

This feature has no annotations

cg_0.2_sub10_scaffold_1338_c_3
GWD1_OD1_44_10_partial, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

1851..2675
DNA (825bp) protein (275aa)
Uncharacterized protein {ECO:0000313|EMBL:KKT30214.1}; TaxID=1618757 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Nomurabacteria) bacterium GW2011_GWD1_44_10.;"
cg_0.2_sub10_scaffold_1338_c_4
CG_Nomura_02, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

2770..3468
DNA (699bp) protein (233aa)
Tax=CG_Nomura_02
cg_0.2_sub10_scaffold_1338_c_5
CG_Nomura_02, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

3806..4423
DNA (618bp) protein (206aa)
Tax=CG_Nomura_02
cg_0.2_sub10_scaffold_1338_c_6
CG_Nomura_02, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

5012..6196
DNA (1185bp) protein (395aa)
fibronectin type III domain-containing protein Tax=CG_Nomura_02
Peptidase M23 (Fragment) id=2787848 bin=GWA1_Kazan_50_15 species=ACD81 genus=ACD81 taxon_order=ACD81 taxon_class=ACD81 phylum=OD1 tax=GWA1_Kazan_50_15 organism_group=Kazan organism_desc=Probably Kazan: candidate for curation
fibronectin type III domain-containing protein
cg_0.2_sub10_scaffold_1338_c_7
CG_Nomura_02, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

6313..6780
DNA (468bp) protein (156aa)
putative ATP/GTP-binding transmembrane protein; K06925 UPF0079 ATP-binding protein Tax=CG_Nomura_02
hypothetical protein; K06925 UPF0079 ATP-binding protein id=5803216 bin=OD1_GWC2_34_28 species=ACD7 genus=ACD7 taxon_order=ACD7 taxon_class=ACD7 phylum=OD1-i tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
putative ATP/GTP-binding transmembrane protein
cg_0.2_sub10_scaffold_1338_c_8
CG_Nomura_02, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

6896..9265
DNA (2370bp) protein (790aa)
DNA polymerase i; K02335 DNA polymerase I [EC:2.7.7.7] Tax=CG_Nomura_02
id=5227418 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
DNA polymerase i
cg_0.2_sub10_scaffold_1338_c_9
CG_Nomura_02, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

9300..10010
DNA (711bp) protein (237aa)
id=5803220 Tax=CG_Nomura_02
id=5803220 bin=OD1_GWC2_34_28 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
cg_0.2_sub10_scaffold_1338_c_trna_1
unknown

Not on your lists

10424..10496
DNA (73bp)
transferRNA
cg_0.2_sub10_scaffold_1338_c_10
CG_Nomura_02, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(10501..10872)
DNA (372bp) protein (124aa)
DoxX family protein; K15977 putative oxidoreductase Tax=CG_Nomura_02
Uncharacterised protein family YphA id=5803221 bin=OD1_GWC2_34_28 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
cg_0.2_sub10_scaffold_1338_c_11
CG_Nomura_02, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(10999..12270)
DNA (1272bp) protein (424aa)
UDP-N-acetylmuramyl-tripeptide synthetase; K01928 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] Tax=CG_Nomura_02
UDP-N-acetylmuramyl-tripeptide synthetase; K01928 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] id=5803224 bin=OD1_GWC2_34_28 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
UDP-N-acetylmuramyl-tripeptide synthetase
cg_0.2_sub10_scaffold_1338_c_12
CG_Nomura_02, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(12279..12926)
DNA (648bp) protein (216aa)
ruvA; holliday junction ATP-dependent DNA helicase RuvA (EC:3.6.4.12) Tax=CG_Nomura_02
ruvA; holliday junction ATP-dependent DNA helicase RuvA (EC:3.6.4.12)
Holliday junction ATP-dependent DNA helicase RuvA id=3305459 bin=GWA2_CPR4_42_17 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=GWA2_CPR4_42_17 organism_group=CPR4 organism_desc=from megabin
cg_0.2_sub10_scaffold_1338_c_13
CG_Nomura_02, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists


12929..13192
DNA (264bp) protein (88aa)
30S ribosomal protein S20; K02968 small subunit ribosomal protein S20 Tax=CG_Nomura_02
30S ribosomal protein S20; K02968 small subunit ribosomal protein S20 id=5803227 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
30S ribosomal protein S20
cg_0.2_sub10_scaffold_1338_c_14
CG_Nomura_02, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

13245..13562
DNA (318bp) protein (106aa)
Rhodanese domain protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XJ99_9BACT
rhodanese Tax=CG_Nomura_02
rhodanese
cg_0.2_sub10_scaffold_1338_c_15
CG_Nomura_02, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

14459..14824
DNA (366bp) protein (122aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K1ZRA5_9BACT
Uncharacterized protein Tax=CG_Nomura_02
cg_0.2_sub10_scaffold_1338_c_16
CG_Nomura_02, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

15114..15395
DNA (282bp) protein (94aa)
Tax=CG_Nomura_02
cg_0.2_sub10_scaffold_1338_c_trna_2
unknown

Not on your lists

comp(15474..15545)
DNA (72bp)
transferRNA
cg_0.2_sub10_scaffold_1338_c_17
CG_Nomura_02, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(15637..16122)
DNA (486bp) protein (162aa)
Putative uncharacterized protein Tax=CG_Nomura_02
Putative uncharacterized protein id=3305474 bin=GWA2_CPR4_42_17 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=GWA2_CPR4_42_17 organism_group=CPR4 organism_desc=from megabin
cg_0.2_sub10_scaffold_1338_c_18
CG_Nomura_02, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

16228..16938
DNA (711bp) protein (237aa)
cytochrome c biogenesis protein (EC:4.4.1.17); K06196 cytochrome c-type biogenesis protein id=5048645 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
ccdA; disulfide bond oxidoreductase D family protein Tax=CG_Nomura_02
Cytochrome C biogenesis protein transmembrane region
cg_0.2_sub10_scaffold_1338_c_19
CG_Nomura_02, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

16954..18207
DNA (1254bp) protein (418aa)
Tax=CG_Nomura_02
cg_0.2_sub10_scaffold_1338_c_20
R_RIF_OD1_08_38_39, RIF-OD1-8, Parcubacteria, Bacteria

Not on your lists

comp(18348..19394)
DNA (1047bp) protein (349aa)
hypothetical protein; K07301 inner membrane protein Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_08_38_39_curated
Na+/Ca+ antiporter, CaCA family id=2823884 bin=GWC1_OD1_38_17 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GWC1_OD1_38_17 organism_group=OD1 (Parcubacteria) organism_desc=Good + Candidate for curation
putative Na(+)/Ca(2+) antiporter
cg_0.2_sub10_scaffold_1338_c_21
CG_Pacebac_01, Pacebacteria, Microgenomates, Bacteria

Not on your lists

comp(19982..20200)
DNA (219bp) protein (73aa)
id=4393659 Tax=CG_Pacebac_01
id=4393659 bin=GWC2_Planctomycete_KSU_39_26 species=ACD49 genus=ACD49 taxon_order=ACD49 taxon_class=ACD49 phylum=BD1-5 tax=GWC2_Planctomycete_KSU_39_26 organism_group=Planctomycetes
cg_0.2_sub10_scaffold_1338_c_22
R_OD1_Kaiserbacteria_49_34, Kaiserbacteria, Parcubacteria, Bacteria

Not on your lists

comp(20383..20982)
DNA (600bp) protein (200aa)
DNA repair protein RadC; K03630 DNA repair protein RadC Tax=RIFCSPHIGHO2_02_FULL_OD1_Kaiserbacteria_49_34_curated
DNA repair protein RadC; K03630 DNA repair protein RadC id=136380 bin=ACD8 species=ACD8 genus=ACD8 taxon_order=ACD8 taxon_class=ACD8 phylum=OD1-i tax=ACD8 organism_group=OD1-i organism_desc=OD1-i
DNA repair protein RadC
Displaying 24 items

View Taxonomy