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cg_0.2_sub10_scaffold_1116_c

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cg_0.2_sub10_scaffold_1116_c_1
CG_Nomura_02, Nomurabacteria, Parcubacteria, Bacteria

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comp(391..1593)
DNA (1203bp) protein (401aa)
Cell division protein ftsZ (Fragment) n=1 Tax=sediment metagenome RepID=D9PJ42_9ZZZZ
cell division protein FtsZ; K03531 cell division protein FtsZ Tax=CG_Nomura_02
cell division protein FtsZ
cg_0.2_sub10_scaffold_1116_c_2

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comp(1784..2947)
DNA (1164bp) protein (388aa)
Cell division protein ftsA {ECO:0000313|EMBL:KKT59352.1}; TaxID=1618913 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC1_44_26.;"
cell division protein FtsA; K03590 cell division protein FtsA id=5803489 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
cell division protein FtsA
cg_0.2_sub10_scaffold_1116_c_3

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comp(3146..3523)
DNA (378bp) protein (126aa)
Putative rRNA maturation factor {ECO:0000313|EMBL:KKT59353.1}; TaxID=1618913 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC1_44_26.;"
hypothetical protein; K07042 probable rRNA maturation factor id=5803490 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
cg_0.2_sub10_scaffold_1116_c_4
GWA1_OD1_44_13, Parcubacteria, Bacteria

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comp(3523..3780)
DNA (258bp) protein (86aa)
seg id=5803491 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
Tax=GWA1_OD1_44_13
cg_0.2_sub10_scaffold_1116_c_5
R_RIF_OD1_09_44_41, RIF-OD1-9, Parcubacteria, Bacteria

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comp(3794..4006)
DNA (213bp) protein (71aa)
phosphoribosyl transferase (EC:2.4.2.-) Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_09_44_41_curated
Phosphoribosyltransferase n=1 Tax=Streptomyces flavogriseus (strain ATCC 33331 / DSM 40990 / IAF-45CD) RepID=E8W9Y5_STRFA
hypothetical protein
cg_0.2_sub10_scaffold_1116_c_6
GWA1_OD1_44_13, Parcubacteria, Bacteria

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comp(4013..4435)
DNA (423bp) protein (141aa)
Phosphoribosyltransferase Tax=GWA1_OD1_44_13
phosphoribosyl transferase Rv0571c/MT0597 id=15190435 bin=GWB1_SUB10_ACD81 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWB1_SUB10_ACD81 organism_group=OD1 (Parcubacteria) organism_desc=Complete
phosphoribosyltransferase
cg_0.2_sub10_scaffold_1116_c_7
R_RIF_OD1_09_44_41, RIF-OD1-9, Parcubacteria, Bacteria

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4932..5168
DNA (237bp) protein (79aa)
upp; uracil phosphoribosyltransferase (EC:2.4.2.9); K00761 uracil phosphoribosyltransferase [EC:2.4.2.9] Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_09_44_41_curated
upp; uracil phosphoribosyltransferase (EC:2.4.2.9)
Uracil phosphoribosyltransferase n=1 Tax=Polysphondylium pallidum RepID=D3B1H2_POLPA
cg_0.2_sub10_scaffold_1116_c_8
CG_Nomura_02, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(5233..6579)
DNA (1347bp) protein (449aa)
hisS1; histidyl-tRNA synthetase; K01892 histidyl-tRNA synthetase [EC:6.1.1.21] Tax=CG_Nomura_02
id=5227159 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
hisS1; histidyl-tRNA synthetase
cg_0.2_sub10_scaffold_1116_c_9
CG_Nomura_02, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(6598..7206)
DNA (609bp) protein (203aa)
signal peptidase I (EC:3.4.21.89); K03100 signal peptidase I [EC:3.4.21.89] Tax=CG_Nomura_02
signal peptidase I (EC:3.4.21.89); K03100 signal peptidase I [EC:3.4.21.89] id=5803493 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
signal peptidase I (EC:3.4.21.89)
cg_0.2_sub10_scaffold_1116_c_10
CG_Nomura_02, Nomurabacteria, Parcubacteria, Bacteria

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7254..7907
DNA (654bp) protein (218aa)
peptidyl-tRNA hydrolase (EC:3.1.1.29); K01056 peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29] Tax=CG_Nomura_02
Aminoacyl-tRNA hydrolase (EC:3.1.1.29); K01056 peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29] id=5803533 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
pth; peptidyl-tRNA hydrolase (EC:3.1.1.29)
cg_0.2_sub10_scaffold_1116_c_11
CG_Nomura_02, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

8306..8509
DNA (204bp) protein (68aa)
Tax=CG_Nomura_02
cg_0.2_sub10_scaffold_1116_c_12
CG_Nomura_02, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

8550..8891
DNA (342bp) protein (114aa)
Curli production assembly/transport component CsgG n=1 Tax=Acidovorax avenae (strain ATCC 19860 / DSM 7227 / JCM 20985 / NCPPB 1011) RepID=F0QCH0_ACIAP
curli production assembly/transport component CsgG Tax=CG_Nomura_02
curli production assembly/transport component CsgG
cg_0.2_sub10_scaffold_1116_c_13
GWA1_OD1_44_13, Parcubacteria, Bacteria

Not on your lists

comp(8966..10138)
DNA (1173bp) protein (391aa)
Uncharacterized protein {ECO:0000313|EMBL:KKT38453.1}; TaxID=1618788 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA1_44_13.;"
major facilitator superfamily transporter id=5803421 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
cg_0.2_sub10_scaffold_1116_c_14

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comp(10206..12266)
DNA (2061bp) protein (687aa)
RNA-metabolising metallo-beta-lactamase {ECO:0000313|EMBL:KKT60664.1}; TaxID=1618913 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC1_44_26.;"
RNA-metabolising metallo-beta-lactamase id=4965045 bin=GWA2_CPR4_42_17 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=GWA2_CPR4_42_17 organism_group=CPR4 organism_desc=from megabin
hypothetical protein
cg_0.2_sub10_scaffold_1116_c_15

Not on your lists

comp(12410..14164)
DNA (1755bp) protein (585aa)
Extracellular solute-binding protein {ECO:0000313|EMBL:KKT60663.1}; TaxID=1618913 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC1_44_26.;"
Extracellular solute-binding protein family 5 id=4965044 bin=GWA2_CPR4_42_17 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=GWA2_CPR4_42_17 organism_group=CPR4 organism_desc=from megabin
putative ABC transporter substrate binding protein
cg_0.2_sub10_scaffold_1116_c_16
R_RIF_OD1_09_44_41, RIF-OD1-9, Parcubacteria, Bacteria

Not on your lists

comp(14232..14465)
DNA (234bp) protein (78aa)
Preprotein translocase SecG subunit Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_09_44_41_curated
preprotein translocase subunit SecG; K03075 preprotein translocase subunit SecG id=5227223 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
preprotein translocase subunit SecG
cg_0.2_sub10_scaffold_1116_c_17
R_RIF_OD1_09_44_41, RIF-OD1-9, Parcubacteria, Bacteria

Not on your lists


14565..14792
DNA (228bp) protein (76aa)
rpmF; 50S ribosomal protein L32; K02911 large subunit ribosomal protein L32 Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_09_44_41_curated
rpmF; 50S ribosomal protein L32; K02911 large subunit ribosomal protein L32 id=5803444 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
cg_0.2_sub10_scaffold_1116_c_18
R_RIF_OD1_09_44_41, RIF-OD1-9, Parcubacteria, Bacteria

Not on your lists

14867..15772
DNA (906bp) protein (302aa)
putative transcription termination factor Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_09_44_41_curated
NusB antitermination factor; K03625 N utilization substance protein B id=5226910 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
putative transcription termination factor
cg_0.2_sub10_scaffold_1116_c_19
GWA1_OD1_44_13, Parcubacteria, Bacteria

Not on your lists

15902..16600
DNA (699bp) protein (233aa)
ribonuclease III (EC:3.1.26.3); K03685 ribonuclease III [EC:3.1.26.3] id=5803446 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
putative ribonuclease III (EC:3.1.26.3)
Ribonuclease 3 {ECO:0000313|EMBL:KKT38530.1}; TaxID=1618788 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA1_44_13.;"
Displaying 19 items

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