ggKbase home page

cg2_3.0_scaffold_260_c

Search features with annotation key words

Displaying items 1-30 of 67 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cg2_3.0_scaffold_260_c_1
unknown

Not on your lists

comp(179..406)
DNA (228bp) protein (76aa)

This feature has no annotations

cg2_3.0_scaffold_260_c_2
R_RIF_OD1_07_48_16, RIF-OD1-7, Parcubacteria, Bacteria

Not on your lists

706..1305
DNA (600bp) protein (200aa)
Uncharacterized protein Tax=RIFCSPHIGHO2_02_FULL_RIF_OD1_07_48_16_curated
methyltransferase
methyltransferase id=5241174 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
cg2_3.0_scaffold_260_c_3
GWC2_OD1_37_14, Magasanikbacteria, Parcubacteria, Bacteria

Not on your lists

1506..1772
DNA (267bp) protein (89aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2DHP5_9BACT
Putative uncharacterized protein Tax=GWC2_OD1_37_14
hypothetical protein
cg2_3.0_scaffold_260_c_4
Methanothermus fervidus, Methanothermus, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1769..2098)
DNA (330bp) protein (110aa)
Translation initiation factor 1A n=1 Tax=Methanothermus fervidus (strain ATCC 43054 / DSM 2088 / JCM 10308 / V24 S) RepID=E3GXR6_METFV rbh
translation initiation factor 1a (aeif-1a)
Translation initiation factor 1A {ECO:0000256|HAMAP-Rule:MF_00216}; Short=aIF-1A {ECO:0000256|HAMAP-Rule:MF_00216};; TaxID=523846 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales;
cg2_3.0_scaffold_260_c_5
AR5, Aenigmarchaeota, DPANN, Archaea

Not on your lists

2145..2669
DNA (525bp) protein (175aa)
hypothetical protein; K07254 tRNA (cytidine56-2'-O)-methyltransferase [EC:2.1.1.206] id=18248926 bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
hypothetical protein; K07254 tRNA (cytidine56-2'-O)-methyltransferase [EC:2.1.1.206] Tax=AR5
tRNA 2'-O-methylase
cg2_3.0_scaffold_260_c_6
RBG_16_Micrarchaeota_49_10_curated, Micrarchaeota, Archaea

Not on your lists

comp(2915..3148)
DNA (234bp) protein (78aa)
hypothetical protein n=1 Tax=Marinimicrobia bacterium JGI 0000039-D08 RepID=UPI00039F57D5
hypothetical protein Tax=RBG_16_Micrarchaeota_49_10_curated
hypothetical protein
cg2_3.0_scaffold_260_c_7
Enhygromyxa salina, Enhygromyxa, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3229..3981)
DNA (753bp) protein (251aa)
Uncharacterized protein n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6G0L6_9DELT
Uncharacterized protein {ECO:0000313|EMBL:KIG15125.1}; TaxID=215803 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Enhygromyxa.;" source="Enhygromyxa salina.;"
cg2_3.0_scaffold_260_c_8
unknown

Not on your lists

comp(3978..4277)
DNA (300bp) protein (100aa)

This feature has no annotations

cg2_3.0_scaffold_260_c_9
Methanohalobium evestigatum, Methanohalobium, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(4278..4811)
DNA (534bp) protein (178aa)
Transcriptional regulator, ArsR family n=1 Tax=Methanohalobium evestigatum (strain DSM 3721 / OCM 161 / Z-7303) RepID=D7EBQ4_METEZ rbh
ArsR family transcriptional regulator
Transcriptional regulator, ArsR family {ECO:0000313|EMBL:ADI74896.1}; TaxID=644295 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanohalobium.;" source="M
cg2_3.0_scaffold_260_c_10
Methanobacterium paludis, Methanobacterium, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

Not on your lists

comp(4875..5798)
DNA (924bp) protein (308aa)
S-adenosyl-L-methionine-dependent tRNA 4-demethylwyosine synthase {ECO:0000256|HAMAP-Rule:MF_01921}; EC=4.1.3.44 {ECO:0000256|HAMAP-Rule:MF_01921};; tRNA wyosine derivatives biosynthesis protein Taw1
Wyosine base formation domain-containing protein n=1 Tax=Methanobacterium sp. (strain SWAN-1) RepID=F6D1Y3_METSW rbh
Wyosine base formation domain-containing protein
cg2_3.0_scaffold_260_c_11
unknown

Not on your lists

comp(5836..6261)
DNA (426bp) protein (142aa)

This feature has no annotations

cg2_3.0_scaffold_260_c_12
unknown

Not on your lists

comp(6263..6424)
DNA (162bp) protein (54aa)

This feature has no annotations

cg2_3.0_scaffold_260_c_13
unknown

Not on your lists

comp(6426..7946)
DNA (1521bp) protein (507aa)
Putative uncharacterized protein n=1 Tax=uncultured euryarchaeote Alv-FOS5 RepID=Q3SBB2_9EURY id=5103476 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Putative uncharacterized protein n=1 Tax=uncultured euryarchaeote Alv-FOS5 RepID=Q3SBB2_9EURY Tax=AR20
hypothetical protein
cg2_3.0_scaffold_260_c_trna_1
unknown

Not on your lists

8121..8194
DNA (74bp)
transferRNA
cg2_3.0_scaffold_260_c_14
unknown

Not on your lists

comp(8265..8774)
DNA (510bp) protein (170aa)

This feature has no annotations

cg2_3.0_scaffold_260_c_15
unknown

Not on your lists

comp(9066..9338)
DNA (273bp) protein (91aa)

This feature has no annotations

cg2_3.0_scaffold_260_c_16
R_OD1_Falkowbacteria_44_11, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

9343..9642
DNA (300bp) protein (100aa)
Probable disulfide formation protein n=2 Tax=Bacillus RepID=U5L727_9BACI
bdbC; disulfide oxidoreductase; K03611 disulfide bond formation protein DsbB Tax=RIFCSPHIGHO2_01_FULL_OD1_Falkowbacteria_44_11_curated
dihydroneopterin aldolase
cg2_3.0_scaffold_260_c_17
unknown

Not on your lists

comp(9657..10163)
DNA (507bp) protein (169aa)

This feature has no annotations

cg2_3.0_scaffold_260_c_18
Porphyromonas crevioricanis, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

10234..10734
DNA (501bp) protein (167aa)
PAP2 superfamily protein n=2 Tax=Porphyromonas RepID=S4NA24_9PORP
phosphoesterase PA-phosphatase-like protein
PAP2 superfamily protein {ECO:0000313|EMBL:GAD04878.1}; TaxID=1305617 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas crevioric
cg2_3.0_scaffold_260_c_19
CG_Aenigma_01, Aenigmaarchaeota, Archaea

Not on your lists

comp(10721..11557)
DNA (837bp) protein (279aa)
Putative uncharacterized protein n=1 Tax=Candidatus Micrarchaeum acidiphilum ARMAN-2 RepID=C7DHK8_9EURY id=5103875 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
hypothetical protein Tax=CG_Aenigma_01
hypothetical protein
cg2_3.0_scaffold_260_c_20
CG_Aenigma_01, Aenigmaarchaeota, Archaea

Not on your lists

comp(11579..12109)
DNA (531bp) protein (177aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00037BD51F
hypothetical protein Tax=CG_Aenigma_01
cg2_3.0_scaffold_260_c_21
CG_Aenigma_01, Aenigmaarchaeota, Archaea

Not on your lists

12170..12817
DNA (648bp) protein (216aa)
Phosphatidate cytidylyltransferase-like protein n=1 Tax=Bacteriovorax sp. DB6_IX RepID=T0RXI7_9DELT
hypothetical protein Tax=CG_Aenigma_01
hypothetical protein
cg2_3.0_scaffold_260_c_22
CG_Aenigma_01, Aenigmaarchaeota, Archaea

Not on your lists

12837..13679
DNA (843bp) protein (281aa)
Putative lycopene elongase n=1 Tax=Arthrobacter arilaitensis (strain DSM 16368 / CIP 108037 / JCM 13566 / Re117) RepID=E1VVC9_ARTAR
crtEb; lycopene elongase Tax=CG_Aenigma_01
crtEb; lycopene elongase
cg2_3.0_scaffold_260_c_23
CG_Aenigma_01, Aenigmaarchaeota, Archaea

Not on your lists

comp(13676..14752)
DNA (1077bp) protein (359aa)
FAD dependent oxidoreductase, putative n=1 Tax=Aciduliprofundum boonei (strain DSM 19572 / T469) RepID=B5I9Q2_ACIB4 rbh
geranylgeranyl reductase Tax=CG_Aenigma_01
geranylgeranyl reductase family protein
cg2_3.0_scaffold_260_c_24
CG_Aenigma_01, Aenigmaarchaeota, Archaea

Not on your lists

14796..15713
DNA (918bp) protein (306aa)
carbamate kinase; K00926 carbamate kinase [EC:2.7.2.2] Tax=CG_Aenigma_01
Carbamate kinase n=1 Tax=Thermococcus barophilus (strain DSM 11836 / MP) RepID=F0LK57_THEBM rbh
carbamate kinase-like carbamoyl phosphate synthetase
cg2_3.0_scaffold_260_c_trna_2
unknown

Not on your lists

15748..15863
DNA (116bp)
transferRNA
cg2_3.0_scaffold_260_c_25
CG_Aenigma_01, Aenigmaarchaeota, Archaea

Not on your lists

comp(15938..16147)
DNA (210bp) protein (70aa)
Tax=CG_Aenigma_01
cg2_3.0_scaffold_260_c_26
CG_Aenigma_01, Aenigmaarchaeota, Archaea

Not on your lists

comp(16270..16905)
DNA (636bp) protein (212aa)
pcm; protein-L-isoaspartate O-methyltransferase; K00573 protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77] Tax=CG_Aenigma_01
Protein-L-isoaspartate O-methyltransferase n=1 Tax=Methanopyrus kandleri (strain AV19 / DSM 6324 / JCM 9639 / NBRC 100938) RepID=PIMT_METKA rbh
pcm; protein-L-isoaspartate O-methyltransferase
cg2_3.0_scaffold_260_c_27
CG_Aenigma_01, Aenigmaarchaeota, Archaea

Not on your lists

comp(16953..17288)
DNA (336bp) protein (112aa)
DNA/RNA-binding protein Alba 1 n=1 Tax=Methanopyrus kandleri (strain AV19 / DSM 6324 / JCM 9639 / NBRC 100938) RepID=ALBA1_METKA rbh
Ssh10b_1; DNA/RNA-binding protein albA; K03622 archaea-specific DNA-binding protein Tax=CG_Aenigma_01
Ssh10b_1; DNA/RNA-binding protein albA
cg2_3.0_scaffold_260_c_28
CG_Aenigma_01, Aenigmaarchaeota, Archaea

Not on your lists

comp(17360..17812)
DNA (453bp) protein (151aa)
Tax=CG_Aenigma_01
Displaying items 1-30 of 67 in total

View Taxonomy