ggKbase home page

cg2_3.0_scaffold_3288_c

Search features with annotation key words

Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cg2_3.0_scaffold_3288_c_trna_1
unknown

Not on your lists

109..182
DNA (74bp)
transferRNA
cg2_3.0_scaffold_3288_c_1
CG_Aenigma_01, Aenigmaarchaeota, Archaea

Not on your lists

464..694
DNA (231bp) protein (77aa)
hypothetical protein Tax=CG_Aenigma_01
id=4318179 bin=PER_GWC2_41_7 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=PER_GWC2_41_7 organism_group=PER (Peregrinibacteria)
hypothetical protein
cg2_3.0_scaffold_3288_c_2
CG_Aenigma_01, Aenigmaarchaeota, Archaea

Not on your lists

comp(698..1300)
DNA (603bp) protein (201aa)
Tax=CG_Aenigma_01
cg2_3.0_scaffold_3288_c_3
CG_Aenigma_01, Aenigmaarchaeota, Archaea

Not on your lists

1422..1961
DNA (540bp) protein (180aa)
Protein GrpE n=1 Tax=Methanosphaerula palustris (strain ATCC BAA-1556 / DSM 19958 / E1-9c) RepID=B8GIW3_METPE rbh
GrpE protein HSP-70 cofactor; K03687 molecular chaperone GrpE Tax=CG_Aenigma_01
GrpE protein HSP-70 cofactor
cg2_3.0_scaffold_3288_c_4
CG_Aenigma_01, Aenigmaarchaeota, Archaea

Not on your lists

1967..3844
DNA (1878bp) protein (626aa)
chaperone protein DnaK (EC:1.3.1.74); K04043 molecular chaperone DnaK Tax=CG_Aenigma_01
chaperone protein DnaK (EC:1.3.1.74)
Chaperone protein DnaK n=1 Tax=Methanosphaerula palustris (strain ATCC BAA-1556 / DSM 19958 / E1-9c) RepID=B8GIW4_METPE rbh
cg2_3.0_scaffold_3288_c_5
CG_Aenigma_01, Aenigmaarchaeota, Archaea

Not on your lists

3841..4950
DNA (1110bp) protein (370aa)
Chaperone protein DnaJ n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1CE67_9CLOT
DnaJ; molecular chaperone DnaJ; K03686 molecular chaperone DnaJ Tax=CG_Aenigma_01
DnaJ; molecular chaperone DnaJ
cg2_3.0_scaffold_3288_c_6
CG_Aenigma_01, Aenigmaarchaeota, Archaea

Not on your lists

5515..6078
DNA (564bp) protein (188aa)
hypothetical protein
hypothetical protein Tax=CG_Aenigma_01
hypothetical protein id=5044582 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
cg2_3.0_scaffold_3288_c_7
CG_Aenigma_01, Aenigmaarchaeota, Archaea

Not on your lists

6142..6408
DNA (267bp) protein (89aa)
Uncharacterized protein n=1 Tax=Methanosarcina mazei Tuc01 RepID=M1Q6W9_METMZ rbh
Hypothetical protein Tax=CG_Aenigma_01
Hypothetical protein
cg2_3.0_scaffold_3288_c_8
CG_Aenigma_01, Aenigmaarchaeota, Archaea

Not on your lists

comp(6420..9212)
DNA (2793bp) protein (931aa)
ATP dependent helicase, Lhr family; K03724 ATP-dependent helicase Lhr and Lhr-like helicase [EC:3.6.4.-] Tax=CG_Aenigma_01
ATP dependent helicase, Lhr family id=3895731 bin=PER_GWC2_41_7 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=PER_GWC2_41_7 organism_group=PER (Peregrinibacteria)
ATP dependent helicase, Lhr family
cg2_3.0_scaffold_3288_c_9
CG_Aenigma_01, Aenigmaarchaeota, Archaea

Not on your lists

9374..10162
DNA (789bp) protein (263aa)
Flp pilus assembly protein TadD Tax=CG_Aenigma_01
hypothetical protein id=5049563 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
Flp pilus assembly protein TadD
cg2_3.0_scaffold_3288_c_10
CG_Aenigma_01, Aenigmaarchaeota, Archaea

Not on your lists

10291..10920
DNA (630bp) protein (210aa)
mutY1; endonuclease III; K10773 endonuclease III [EC:4.2.99.18] Tax=CG_Aenigma_01
Endonuclease III n=1 Tax=Aquifex aeolicus (strain VF5) RepID=O66636_AQUAE
mutY1; endonuclease III
cg2_3.0_scaffold_3288_c_11
unknown

Not on your lists

10991..11146
DNA (156bp) protein (52aa)

This feature has no annotations

cg2_3.0_scaffold_3288_c_12
CG_Aenigma_01, Aenigmaarchaeota, Archaea

Not on your lists

comp(11139..12815)
DNA (1677bp) protein (559aa)
Fibronectin-binding A domain protein n=1 Tax=Methanosalsum zhilinae (strain DSM 4017 / NBRC 107636 / OCM 62 / WeN5) RepID=F7XPG3_METZD rbh
fibronectin-binding A domain-containing protein Tax=CG_Aenigma_01
fibronectin-binding A domain-containing protein
cg2_3.0_scaffold_3288_c_13
CG_Aenigma_01, Aenigmaarchaeota, Archaea

Not on your lists

comp(12760..13347)
DNA (588bp) protein (196aa)
chromosome segregation and condensation protein ScpB; K06024 segregation and condensation protein B Tax=CG_Aenigma_01
Chromosome segregation and condensation protein, ScpB id=4922379 bin=PER_GWC2_41_7 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=PER_GWC2_41_7 organism_group=PER (Peregrinibacteria)
chromosome segregation and condensation protein ScpB
cg2_3.0_scaffold_3288_c_14
CG_Aenigma_01, Aenigmaarchaeota, Archaea

Not on your lists

13433..13744
DNA (312bp) protein (104aa)
nitric oxide dioxygenase (EC:1.14.12.17) id=96529 bin=ACD63 species=ACD63 genus=ACD63 taxon_order=ACD63 taxon_class=ACD63 phylum=OD1 tax=ACD63 organism_group=OD1 (Parcubacteria) organism_desc=OD1
hypothetical protein Tax=CG_Aenigma_01
hypothetical protein
cg2_3.0_scaffold_3288_c_15
CG_Aenigma_01, Aenigmaarchaeota, Archaea

Not on your lists

13872..15155
DNA (1284bp) protein (428aa)
seryl-tRNA synthetase (EC:6.1.1.11); K01875 seryl-tRNA synthetase [EC:6.1.1.11] Tax=CG_Aenigma_01
serS; seryl-tRNA synthetase (EC:6.1.1.11); K01875 seryl-tRNA synthetase [EC:6.1.1.11] id=5047679 bin=GW2011_AR5 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=GW2011_AR5 organism_group=Archaea organism_desc=gwa2_.48_18 Replace with curated version!
seryl-tRNA synthetase (EC:6.1.1.11)
cg2_3.0_scaffold_3288_c_16
CG_Aenigma_01, Aenigmaarchaeota, Archaea

Not on your lists

15201..15434
DNA (234bp) protein (78aa)
hypothetical protein Tax=CG_Aenigma_01
hypothetical protein
hypothetical protein id=14427994 bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
cg2_3.0_scaffold_3288_c_17
CG_Aenigma_01, Aenigmaarchaeota, Archaea

Not on your lists

15431..15694
DNA (264bp) protein (88aa)
Uncharacterized protein n=1 Tax=Thermoplasmatales archaeon Gpl RepID=T0MY94_9EURY rbh
hypothetical protein; K06218 RelE protein Tax=CG_Aenigma_01
hypothetical protein
Displaying 18 items

View Taxonomy