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cg2_3.0_scaffold_4566_c

Search features with annotation key words

Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cg2_3.0_scaffold_4566_c_1
CG_GN02-01, Gracilibacteria, Bacteria

Not on your lists

comp(516..713)
DNA (198bp) protein (66aa)
periplasmic sensor signal transduction histidine kinase Tax=CG_GN02-01
periplasmic sensor signal transduction histidine kinase id=123995 bin=ACD78 species=ACD78 genus=ACD78 taxon_order=ACD78 taxon_class=ACD78 phylum=BD1-5 tax=ACD78 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5
cg2_3.0_scaffold_4566_c_2
CG_GN02-01, Gracilibacteria, Bacteria

Not on your lists

comp(768..1040)
DNA (273bp) protein (91aa)
Tax=CG_GN02-01
cg2_3.0_scaffold_4566_c_3
unknown

Not on your lists

comp(1116..1361)
DNA (246bp) protein (82aa)

This feature has no annotations

cg2_3.0_scaffold_4566_c_4
CG_GN02-01, Gracilibacteria, Bacteria

Not on your lists

comp(1464..1715)
DNA (252bp) protein (84aa)
Tax=CG_GN02-01
cg2_3.0_scaffold_4566_c_5
CG_GN02-01, Gracilibacteria, Bacteria

Not on your lists

comp(1853..2389)
DNA (537bp) protein (179aa)
Two-component response regulator n=1 Tax=uncultured bacterium (gcode 4) RepID=K2GSF7_9BACT
two component transcriptional regulator, winged helix family Tax=CG_GN02-01
two component transcriptional regulator, winged helix family
cg2_3.0_scaffold_4566_c_6
CG_GN02-01, Gracilibacteria, Bacteria

Not on your lists

comp(2514..3317)
DNA (804bp) protein (268aa)
coiled-coil 482..503 Tax=CG_GN02-01
coiled-coil 482..503 id=123692 bin=ACD78 species=ACD78 genus=ACD78 taxon_order=ACD78 taxon_class=ACD78 phylum=BD1-5 tax=ACD78 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5
cg2_3.0_scaffold_4566_c_7
CG_GN02-01, Gracilibacteria, Bacteria

Not on your lists

comp(3348..4013)
DNA (666bp) protein (222aa)
EmrB/QacA subfamily drug resistance transporter Tax=CG_GN02-01
coiled-coil 482..503 id=123692 bin=ACD78 species=ACD78 genus=ACD78 taxon_order=ACD78 taxon_class=ACD78 phylum=BD1-5 tax=ACD78 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5
Rhs element Vgr family protein
cg2_3.0_scaffold_4566_c_8
CG_GN02-01, Gracilibacteria, Bacteria

Not on your lists

comp(4397..4648)
DNA (252bp) protein (84aa)
Putative uncharacterized protein n=1 Tax=Melittangium lichenicola RepID=Q70PA6_9DELT id=123691 bin=ACD78 species=Melittangium lichenicola genus=Melittangium taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=ACD78 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5
ApbE family lipoprotein; K03734 thiamine biosynthesis lipoprotein Tax=CG_GN02-01
Thiamin biosynthesis lipoprotein ApbE
cg2_3.0_scaffold_4566_c_9
CG_GN02-01, Gracilibacteria, Bacteria

Not on your lists

comp(4691..5020)
DNA (330bp) protein (110aa)
Putative uncharacterized protein n=1 Tax=Melittangium lichenicola RepID=Q70PA6_9DELT id=123691 bin=ACD78 species=Melittangium lichenicola genus=Melittangium taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=ACD78 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5
Putative uncharacterized protein Tax=CG_GN02-01
cg2_3.0_scaffold_4566_c_10
CG_GN02-01, Gracilibacteria, Bacteria

Not on your lists

comp(5266..5586)
DNA (321bp) protein (107aa)
dimethyladenosine transferase; K02528 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182] Tax=CG_GN02-01
dimethyladenosine transferase; K02528 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182] id=123697 bin=ACD78 species=ACD78 genus=ACD78 taxon_order=ACD78 taxon_class=ACD78 phylum=BD1-5 tax=ACD78 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5
cg2_3.0_scaffold_4566_c_11
CG_GN02-01, Gracilibacteria, Bacteria

Not on your lists


comp(5902..6156)
DNA (255bp) protein (85aa)
ksgA; dimethyladenosine transferase (EC:2.1.1.-); K02528 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182] Tax=CG_GN02-01
dimethyladenosine transferase (EC:2.1.1.48); K02528 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182] id=49662 bin=ACD3 species=ACD3 genus=ACD3 taxon_order=ACD3 taxon_class=ACD3 phylum=BD1-5 tax=ACD3 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5
ksgA; dimethyladenosine transferase (EC:2.1.1.-)
cg2_3.0_scaffold_4566_c_12
CG_GN02-01, Gracilibacteria, Bacteria

Not on your lists

comp(6179..6385)
DNA (207bp) protein (69aa)
seg 77..88 Tax=CG_GN02-01
seg 77..88 id=123690 bin=ACD78 species=ACD78 genus=ACD78 taxon_order=ACD78 taxon_class=ACD78 phylum=BD1-5 tax=ACD78 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5
cg2_3.0_scaffold_4566_c_13
CG_GN02-01, Gracilibacteria, Bacteria

Not on your lists

comp(6407..6865)
DNA (459bp) protein (153aa)
seg 77..88 Tax=CG_GN02-01
seg 77..88 id=123690 bin=ACD78 species=ACD78 genus=ACD78 taxon_order=ACD78 taxon_class=ACD78 phylum=BD1-5 tax=ACD78 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5
cg2_3.0_scaffold_4566_c_14
unknown

Not on your lists

comp(7145..7309)
DNA (165bp) protein (55aa)
Small heat shock protein n=3 Tax=candidate division TM7 RepID=UPI00016B2686 Tax=ACD78
Small heat shock protein n=3 Tax=candidate division TM7 RepID=UPI00016B2686 id=123696 bin=ACD78 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Candidatus Saccharibacteria tax=ACD78 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5
cg2_3.0_scaffold_4566_c_15
CG_GN02-01, Gracilibacteria, Bacteria

Not on your lists

comp(7412..7585)
DNA (174bp) protein (58aa)
Small heat shock protein n=3 Tax=candidate division TM7 RepID=UPI00016B2686 id=123696 bin=ACD78 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Candidatus Saccharibacteria tax=ACD78 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5
Small heat shock protein Tax=CG_GN02-01
cg2_3.0_scaffold_4566_c_16
CG_GN02-01, Gracilibacteria, Bacteria

Not on your lists

7808..8311
DNA (504bp) protein (168aa)
Uncharacterized protein (Fragment) n=1 Tax=uncultured bacterium (gcode 4) RepID=K1XGD8_9BACT
pilC; type IV pilus biogenesis protein PilC; K02653 type IV pilus assembly protein PilC Tax=CG_GN02-01
type II secretion system protein F
cg2_3.0_scaffold_4566_c_17
CG_GN02-01, Gracilibacteria, Bacteria

Not on your lists

8312..8617
DNA (306bp) protein (102aa)
type II secretion system protein; K02653 type IV pilus assembly protein PilC Tax=CG_GN02-01
type II secretion system protein; K02653 type IV pilus assembly protein PilC id=123695 bin=ACD78 species=ACD78 genus=ACD78 taxon_order=ACD78 taxon_class=ACD78 phylum=BD1-5 tax=ACD78 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5
cg2_3.0_scaffold_4566_c_18
CG_GN02-01, Gracilibacteria, Bacteria

Not on your lists

8711..8920
DNA (210bp) protein (70aa)
Uncharacterized protein (Fragment) n=1 Tax=uncultured bacterium (gcode 4) RepID=K1XGD8_9BACT
type II secretion system protein; K02653 type IV pilus assembly protein PilC Tax=CG_GN02-01
type II secretion system protein
cg2_3.0_scaffold_4566_c_19
CG_GN02-01, Gracilibacteria, Bacteria

Not on your lists

comp(9404..9601)
DNA (198bp) protein (66aa)
carboxyl-terminal protease; K03797 carboxyl-terminal processing protease [EC:3.4.21.102] Tax=CG_GN02-01
carboxyl-terminal protease; K03797 carboxyl-terminal processing protease [EC:3.4.21.102] id=123985 bin=ACD78 species=ACD78 genus=ACD78 taxon_order=ACD78 taxon_class=ACD78 phylum=BD1-5 tax=ACD78 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5
cg2_3.0_scaffold_4566_c_20
CG_GN02-01, Gracilibacteria, Bacteria

Not on your lists

comp(9836..10021)
DNA (186bp) protein (62aa)
UPI0003D02B4C related cluster n=1 Tax=unknown RepID=UPI0003D02B4C
hypothetical protein
UPI0003D02B4C related cluster Tax=CG_GN02-01
cg2_3.0_scaffold_4566_c_21
CG_GN02-01, Gracilibacteria, Bacteria

Not on your lists

comp(10034..10171)
DNA (138bp) protein (46aa)
Tax=CG_GN02-01
cg2_3.0_scaffold_4566_c_22
unknown

Not on your lists

comp(10280..10372)
DNA (93bp) protein (31aa)

This feature has no annotations

cg2_3.0_scaffold_4566_c_23
CG_GN02-02, Gracilibacteria, Bacteria

Not on your lists

comp(10379..10633)
DNA (255bp) protein (85aa)
ctpA; carboxyl-terminal processing protease (EC:3.4.21.102) Tax=CG_GN02-02
cg2_3.0_scaffold_4566_c_24
CG_GN02-01, Gracilibacteria, Bacteria

Not on your lists

comp(11047..12231)
DNA (1185bp) protein (395aa)
RNA binding S1 domain protein n=1 Tax=candidate division TM7 single-cell isolate TM7c RepID=UPI00016B22D3 id=123984 bin=ACD78 species=candidate division TM7 single-cell isolate TM7c genus=unknown taxon_order=unknown taxon_class=unknown phylum=Candidatus Saccharibacteria tax=ACD78 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5
rpfA; 30S ribosomal protein S1 Tax=CG_GN02-01
RNA binding S1 protein
cg2_3.0_scaffold_4566_c_trna_1
unknown

Not on your lists

comp(12274..12347)
DNA (74bp)
transferRNA
cg2_3.0_scaffold_4566_c_25
CG_GN02-01, Gracilibacteria, Bacteria

Not on your lists

12559..12891
DNA (333bp) protein (111aa)
hypothetical protein Tax=CG_GN02-01
hypothetical protein id=123791 bin=ACD78 species=ACD78 genus=ACD78 taxon_order=ACD78 taxon_class=ACD78 phylum=BD1-5 tax=ACD78 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5
Displaying 26 items

View Taxonomy