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cg2_3.0_scaffold_3116_c

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Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cg2_3.0_scaffold_3116_c_trna_1
unknown

Not on your lists

comp(219..290)
DNA (72bp)
transferRNA
cg2_3.0_scaffold_3116_c_1
R_OD1_Kaiserbacteria_54_22, Kaiserbacteria, Parcubacteria, Bacteria

Not on your lists

comp(361..816)
DNA (456bp) protein (152aa)
hypothetical protein; K09117 hypothetical protein Tax=RIFCSPHIGHO2_02_FULL_OD1_Kaiserbacteria_54_22_curated
GatB/YqeY domain-containing protein; K09117 hypothetical protein id=5803496 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
hypothetical protein
cg2_3.0_scaffold_3116_c_2
R_OD1_Kaiserbacteria_52_12b, Kaiserbacteria, Parcubacteria, Bacteria

Not on your lists

838..1815
DNA (978bp) protein (326aa)
hypothetical protein Tax=RIFCSPLOWO2_01_FULL_OD1_Kaiserbacteria_52_12b_curated
Putative DNA recombination protein id=5227193 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
hypothetical protein
cg2_3.0_scaffold_3116_c_3
R_OD1_Kaiserbacteria_52_12b, Kaiserbacteria, Parcubacteria, Bacteria

Not on your lists


1919..2236
DNA (318bp) protein (106aa)
50S ribosomal protein L21; K02888 large subunit ribosomal protein L21 Tax=RIFCSPLOWO2_01_FULL_OD1_Kaiserbacteria_52_12b_curated
50S ribosomal protein L21 id=5227073 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
50S ribosomal protein L21
cg2_3.0_scaffold_3116_c_4
CG_CPR09_01, CG_CPR09, Bacteria

Not on your lists

2249..3517
DNA (1269bp) protein (423aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA011-A09 RepID=UPI000382A27F
putative DEAD/DEAH box helicase domain protein Tax=CG_CPR09_01
ATP-dependent RNA helicase RhlE
cg2_3.0_scaffold_3116_c_5
CG_CPR09_01, CG_CPR09, Bacteria

Not on your lists

comp(3520..4116)
DNA (597bp) protein (199aa)
recR; Recombination protein recR Tax=CG_CPR09_01
recR; recombination protein RecR; K06187 recombination protein RecR id=5803502 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
recR; Recombination protein recR
cg2_3.0_scaffold_3116_c_6
CG_CPR09_01, CG_CPR09, Bacteria

Not on your lists

comp(4119..5474)
DNA (1356bp) protein (452aa)
replicative DNA helicase; K02314 replicative DNA helicase [EC:3.6.4.12] Tax=CG_CPR09_01
replicative DNA helicase; K02314 replicative DNA helicase [EC:3.6.4.12] id=5803503 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
replicative DNA helicase
cg2_3.0_scaffold_3116_c_7
CG_CPR09_01, CG_CPR09, Bacteria

Not on your lists

comp(5489..6916)
DNA (1428bp) protein (476aa)
cysS; cysteinyl-tRNA synthetase (EC:6.1.1.16); K01883 cysteinyl-tRNA synthetase [EC:6.1.1.16] Tax=CG_CPR09_01
cysS; cysteinyl-tRNA synthetase (EC:6.1.1.16)
Cysteine--tRNA ligase id=4857195 bin=GWA2_Elusimicrobia_56_46 species=unknown genus=Dictyoglomus taxon_order=Dictyoglomales taxon_class=Dictyoglomia phylum=Dictyoglomi tax=GWA2_Elusimicrobia_56_46 organism_group=Elusimicrobia organism_desc=Good
cg2_3.0_scaffold_3116_c_8
CG_CPR09_01, CG_CPR09, Bacteria

Not on your lists

comp(6971..7891)
DNA (921bp) protein (307aa)
magnesium and cobalt transport protein CorA; K03284 magnesium transporter Tax=CG_CPR09_01
Mg2 transporter protein CorA family protein; K03284 magnesium transporter id=5803505 bin=OD1_GWC2_34_28 species=ACD1 genus=ACD1 taxon_order=ACD1 taxon_class=ACD1 phylum=OD1-i tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
magnesium and cobalt transport protein CorA
cg2_3.0_scaffold_3116_c_9
CG_CPR09_01, CG_CPR09, Bacteria

Not on your lists

7911..9206
DNA (1296bp) protein (432aa)
ctpA; carboxy-terminal-processing protease (EC:3.4.21.102); K03797 carboxyl-terminal processing protease [EC:3.4.21.102] Tax=CG_CPR09_01
ctpA; carboxy-terminal-processing protease; K03797 carboxyl-terminal processing protease [EC:3.4.21.102] id=5803506 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
ctpA; carboxy-terminal-processing protease (EC:3.4.21.102)
cg2_3.0_scaffold_3116_c_10
CG_CPR09_01, CG_CPR09, Bacteria

Not on your lists


9223..9666
DNA (444bp) protein (148aa)
50S ribosomal protein L9 n=1 Tax=Caldicellulosiruptor owensensis (strain ATCC 700167 / DSM 13100 / OL) RepID=E4Q5J8_CALOW
50S ribosomal protein L9; K02939 large subunit ribosomal protein L9 Tax=CG_CPR09_01
50S ribosomal protein L9
cg2_3.0_scaffold_3116_c_11
CG_CPR09_01, CG_CPR09, Bacteria

Not on your lists


comp(9670..9948)
DNA (279bp) protein (93aa)
rpmA; 50S ribosomal protein L27; K02899 large subunit ribosomal protein L27 Tax=CG_CPR09_01
50S ribosomal protein L25; K02899 large subunit ribosomal protein L27 id=5803508 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
rpmA; 50S ribosomal protein L27
cg2_3.0_scaffold_3116_c_12
CG_CPR09_01, CG_CPR09, Bacteria

Not on your lists

9970..10305
DNA (336bp) protein (112aa)
transmembrane_regions Tax=CG_CPR09_01
transmembrane_regions id=5803509 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
cg2_3.0_scaffold_3116_c_13
CG_CPR09_01, CG_CPR09, Bacteria

Not on your lists

10328..11059
DNA (732bp) protein (244aa)
Uncharacterized protein n=1 Tax=planctomycete KSU-1 RepID=I3IK31_9PLAN
hypothetical protein; K06966 Tax=CG_CPR09_01
hypothetical protein
cg2_3.0_scaffold_3116_c_14
CG_CPR09_01, CG_CPR09, Bacteria

Not on your lists

11056..11256
DNA (201bp) protein (67aa)
Tax=CG_CPR09_01
cg2_3.0_scaffold_3116_c_15
CG_CPR09_01, CG_CPR09, Bacteria

Not on your lists

comp(11339..12700)
DNA (1362bp) protein (454aa)
peptidase M23 Tax=CG_CPR09_01
peptidase M23b id=5803516 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
peptidase M23
cg2_3.0_scaffold_3116_c_16
CG_CPR09_01, CG_CPR09, Bacteria

Not on your lists

comp(12697..14028)
DNA (1332bp) protein (444aa)
glutamyl-tRNA synthetase; K01885 glutamyl-tRNA synthetase [EC:6.1.1.17] Tax=CG_CPR09_01
glutamyl-tRNA synthetase; K01885 glutamyl-tRNA synthetase [EC:6.1.1.17] id=5803517 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
glutamyl-tRNA synthetase
cg2_3.0_scaffold_3116_c_17
CG_CPR09_01, CG_CPR09, Bacteria

Not on your lists

comp(14025..15164)
DNA (1140bp) protein (380aa)
UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-UDP N-acetylglucosamine transferase (EC:2.4.1.227); K02563 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl
murG2; UDP diphospho-muramoyl pentapeptide beta-N acetylglucosaminyl transferase (EC:2.4.1.227); K02563 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] id=5227062 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-UDP N-acetylglucosamine transferase (EC:2.4.1.227)
cg2_3.0_scaffold_3116_c_18
CG_CPR09_01, CG_CPR09, Bacteria

Not on your lists

comp(15254..16012)
DNA (759bp) protein (253aa)
Tax=CG_CPR09_01
cg2_3.0_scaffold_3116_c_19
CG_CPR09_01, CG_CPR09, Bacteria

Not on your lists

comp(16058..16180)
DNA (123bp) protein (41aa)
stage V sporulation protein E; K03588 cell division protein FtsW Tax=CG_CPR09_01
Displaying 20 items

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