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cg2_3.0_scaffold_406_c

Search features with annotation key words

Displaying items 1-30 of 41 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cg2_3.0_scaffold_406_c_1
CG_CPR09_01, CG_CPR09, Bacteria

Not on your lists

103..993
DNA (891bp) protein (297aa)
putative transcription termination factor Tax=CG_CPR09_01
NusB antitermination factor; K03625 N utilization substance protein B id=5226910 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
putative transcription termination factor
cg2_3.0_scaffold_406_c_2
CG_CPR09_01, CG_CPR09, Bacteria

Not on your lists

986..1675
DNA (690bp) protein (230aa)
putative ribonuclease III (EC:3.1.26.3) Tax=CG_CPR09_01
Ribonuclease 3 n=1 Tax=uncultured bacterium RepID=K2F1D7_9BACT
hypothetical protein
cg2_3.0_scaffold_406_c_3
CG_CPR09_01, CG_CPR09, Bacteria

Not on your lists

1690..3912
DNA (2223bp) protein (741aa)
chromosome segregation protein SMC; K03529 chromosome segregation protein Tax=CG_CPR09_01
Smc; chromosome segregation ATPase; K03529 chromosome segregation protein id=5803429 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
smc; chromosome partition protein Smc
cg2_3.0_scaffold_406_c_4
CG_CPR09_01, CG_CPR09, Bacteria

Not on your lists

comp(3943..5868)
DNA (1926bp) protein (642aa)
ribonuclease R; K12573 ribonuclease R [EC:3.1.-.-] Tax=CG_CPR09_01
RNAse R (EC:3.1.-.-); K12573 ribonuclease R [EC:3.1.-.-] id=5803430 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
ribonuclease R
cg2_3.0_scaffold_406_c_5
CG_CPR09_01, CG_CPR09, Bacteria

Not on your lists


5952..6302
DNA (351bp) protein (117aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA040-L21 RepID=UPI000369A75F
30S ribosomal protein S16; K02959 small subunit ribosomal protein S16 Tax=CG_CPR09_01
30S ribosomal protein S16
cg2_3.0_scaffold_406_c_6
CG_CPR09_01, CG_CPR09, Bacteria

Not on your lists

6324..6623
DNA (300bp) protein (100aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA040-L21 RepID=UPI0003769571
hypothetical protein Tax=CG_CPR09_01
hypothetical protein
cg2_3.0_scaffold_406_c_7
CG_CPR09_01, CG_CPR09, Bacteria

Not on your lists

6626..7276
DNA (651bp) protein (217aa)
trmD; tRNA (guanine-1-)-methyltransferase (EC:2.1.1.31); K00554 tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228] Tax=CG_CPR09_01
trmD; tRNA (guanine-1-)-methyltransferase (EC:2.1.1.31)
tRNA (guanine-N(1)-)-methyltransferase id=5226919 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
cg2_3.0_scaffold_406_c_8
CG_CPR09_01, CG_CPR09, Bacteria

Not on your lists

7486..10659
DNA (3174bp) protein (1058aa)
rpoB; DNA-directed RNA polymerase subunit beta (EC:2.7.7.6); K03043 DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] Tax=CG_CPR09_01
rpoB; DNA-directed RNA polymerase subunit beta (EC:2.7.7.6)
id=5226921 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
cg2_3.0_scaffold_406_c_9
CG_CPR09_01, CG_CPR09, Bacteria

Not on your lists

10678..14415
DNA (3738bp) protein (1246aa)
rpoC; DNA-directed RNA polymerase subunit beta' (EC:2.7.7.6); K03046 DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] Tax=CG_CPR09_01
DNA-directed RNA polymerase subunit beta'; K03046 DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] id=5803388 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
DNA-directed RNA polymerase subunit beta'
cg2_3.0_scaffold_406_c_10
CG_CPR09_01, CG_CPR09, Bacteria

Not on your lists

14462..16174
DNA (1713bp) protein (571aa)
DNA primase (EC:2.7.7.-); K02316 DNA primase [EC:2.7.7.-] Tax=CG_CPR09_01
DNA primase id=3736886 bin=GWC2_OD1_43_27 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWC2_OD1_43_27 organism_group=OD1 (Parcubacteria) organism_desc=Same as C1_43_61 and D1_43_18 Curated this version (complete)
DNA primase
cg2_3.0_scaffold_406_c_11
CG_CPR09_01, CG_CPR09, Bacteria

Not on your lists

16186..17409
DNA (1224bp) protein (408aa)
RNA polymerase, sigma 38 subunit, RpoS; K03086 RNA polymerase primary sigma factor Tax=CG_CPR09_01
RpoD subfamily RNA polymerase sigma-70 subunit; K03086 RNA polymerase primary sigma factor id=5803390 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
RNA polymerase, sigma 38 subunit, RpoS
cg2_3.0_scaffold_406_c_12
CG_CPR09_01, CG_CPR09, Bacteria

Not on your lists

17473..17673
DNA (201bp) protein (67aa)
Uncharacterized protein Tax=CG_CPR09_01
Uncharacterized protein id=15190912 bin=GWC1_OP11_49_16_COMPLETE species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC1_OP11_49_16_COMPLETE organism_group=OP11 (Microgenomates)
cg2_3.0_scaffold_406_c_13
CG_CPR09_01, CG_CPR09, Bacteria

Not on your lists

comp(18167..18589)
DNA (423bp) protein (141aa)
Tax=CG_CPR09_01
cg2_3.0_scaffold_406_c_14
CG_CPR09_01, CG_CPR09, Bacteria

Not on your lists

18645..19487
DNA (843bp) protein (281aa)
Tax=CG_CPR09_01
cg2_3.0_scaffold_406_c_15
CG_CPR09_01, CG_CPR09, Bacteria

Not on your lists

comp(19519..20196)
DNA (678bp) protein (226aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA010-E09 RepID=UPI000375F917
hypothetical protein Tax=CG_CPR09_01
protein-disulfide isomerase
cg2_3.0_scaffold_406_c_16
CG_CPR09_01, CG_CPR09, Bacteria

Not on your lists

comp(20193..20774)
DNA (582bp) protein (194aa)
DEAD/DEAH box helicase domain-containing protein; K06877 DEAD/DEAH box helicase domain-containing protein Tax=CG_CPR09_01
DEAD/DEAH box helicase domain protein id=4893135 bin=GWA2_Ignavibacteria-rel_35_8 species=GWE2_OD1_46_68 genus=GWE2_OD1_46_68 taxon_order=GWE2_OD1_46_68 taxon_class=GWE2_OD1_46_68 phylum=OD1 tax=GWA2_Ignavibacteria-rel_35_8 organism_group=Ignavibacteria
DEAD/DEAH box helicase domain-containing protein
cg2_3.0_scaffold_406_c_17
CG_CPR09_01, CG_CPR09, Bacteria

Not on your lists


comp(20786..22030)
DNA (1245bp) protein (415aa)
hisS; histidyl-tRNA synthetase (EC:6.1.1.21); K01892 histidyl-tRNA synthetase [EC:6.1.1.21] Tax=CG_CPR09_01
hisS; histidyl-tRNA synthetase (EC:6.1.1.21); K01892 histidyl-tRNA synthetase [EC:6.1.1.21] id=5803652 bin=OD1_GWC2_34_28 species=RAAC3_TM7 genus=RAAC3_TM7 taxon_order=RAAC3_TM7 taxon_class=RAAC3_TM7 phylum=TM7 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
hisS; histidyl-tRNA synthetase (EC:6.1.1.21)
cg2_3.0_scaffold_406_c_18
CG_CPR09_01, CG_CPR09, Bacteria

Not on your lists

comp(22045..22581)
DNA (537bp) protein (179aa)
Putative uncharacterized protein Tax=CG_CPR09_01
Putative uncharacterized protein id=1897381 bin=GWE2_OD1_40_11 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWE2_OD1_40_11 organism_group=OD1 (Parcubacteria)
cg2_3.0_scaffold_406_c_19
CG_CPR09_01, CG_CPR09, Bacteria

Not on your lists

comp(22578..22838)
DNA (261bp) protein (87aa)
Tax=CG_CPR09_01
cg2_3.0_scaffold_406_c_20
CG_CPR09_01, CG_CPR09, Bacteria

Not on your lists

comp(22835..23590)
DNA (756bp) protein (252aa)
HemK family modification methylase; K02493 release factor glutamine methyltransferase [EC:2.1.1.-] Tax=CG_CPR09_01
Protoporphyrinogen oxidase id=3309812 bin=GWA1_ZB2_49_26 species=sediment metagenome genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA1_ZB2_49_26 organism_group=ZB2 organism_desc=Good
HemK family modification methylase
cg2_3.0_scaffold_406_c_21
CG_CPR09_01, CG_CPR09, Bacteria

Not on your lists

comp(23674..24045)
DNA (372bp) protein (124aa)
RNP-1-like RNA-binding protein Tax=CG_CPR09_01
RNA-binding protein RNP-3 id=2518563 bin=GWB1_Spirochaetes_59_5 species=Comamonas testosteroni genus=Comamonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWB1_Spirochaetes_59_5 organism_group=Spirochaetes
RNP-1-like RNA-binding protein
cg2_3.0_scaffold_406_c_22
CG_CPR09_01, CG_CPR09, Bacteria

Not on your lists

24356..26047
DNA (1692bp) protein (564aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA011-J21 RepID=UPI000379AE78
ATPase AAA Tax=CG_CPR09_01
putative helicase
cg2_3.0_scaffold_406_c_23
CG_CPR09_01, CG_CPR09, Bacteria

Not on your lists

26104..26829
DNA (726bp) protein (242aa)
hypothetical protein Tax=CG_CPR09_01
Putative uncharacterized protein id=3634404 bin=GWA1_ZB2_49_26 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=GWA1_ZB2_49_26 organism_group=ZB2 organism_desc=Good
hypothetical protein
cg2_3.0_scaffold_406_c_24
CG_CPR09_01, CG_CPR09, Bacteria

Not on your lists

comp(27111..27878)
DNA (768bp) protein (256aa)
HAD-superfamily hydrolase subfamily IIB n=1 Tax=mine drainage metagenome RepID=E6Q2W0_9ZZZZ
HAD family hydrolase; K07024 Tax=CG_CPR09_01
HAD family hydrolase
cg2_3.0_scaffold_406_c_25
CG_CPR09_01, CG_CPR09, Bacteria

Not on your lists

comp(27878..29794)
DNA (1917bp) protein (639aa)
Glycosidase-related protein Tax=CG_CPR09_01
glycosidase ph1107-related protein id=15190105 bin=GWB1_SUB10_ACD81 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWB1_SUB10_ACD81 organism_group=OD1 (Parcubacteria) organism_desc=Complete
glycosidase ph1107-related protein
cg2_3.0_scaffold_406_c_26
CG_CPR09_01, CG_CPR09, Bacteria

Not on your lists

comp(29798..31069)
DNA (1272bp) protein (424aa)
glycosidase-like protein Tax=CG_CPR09_01
glycosidase ph1107-related protein id=15190106 bin=GWB1_SUB10_ACD81 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWB1_SUB10_ACD81 organism_group=OD1 (Parcubacteria) organism_desc=Complete
glycosidase-like protein
cg2_3.0_scaffold_406_c_27
CG_CPR09_01, CG_CPR09, Bacteria

Not on your lists

comp(31563..31742)
DNA (180bp) protein (60aa)
Tax=CG_CPR09_01
cg2_3.0_scaffold_406_c_28
CG_CPR09_01, CG_CPR09, Bacteria

Not on your lists

comp(31749..31949)
DNA (201bp) protein (67aa)
Tax=CG_CPR09_01
cg2_3.0_scaffold_406_c_29
CG_CPR09_01, CG_CPR09, Bacteria

Not on your lists

32113..32673
DNA (561bp) protein (187aa)
Tax=CG_CPR09_01
cg2_3.0_scaffold_406_c_30
CG_CPR09_01, CG_CPR09, Bacteria

Not on your lists

32712..33098
DNA (387bp) protein (129aa)
Mannose-6-phosphate isomerase n=1 Tax=Thioflavicoccus mobilis 8321 RepID=L0GV46_9GAMM
mannose-6-phosphate isomerase Tax=CG_CPR09_01
mannose-6-phosphate isomerase
Displaying items 1-30 of 41 in total

View Taxonomy