ggKbase home page

Ig3397_v2_scaffold_1731

Search features with annotation key words

Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
Ig3397_v2_scaffold_1731_1
BJP_IG2103_TM7_39_1400, Candidatus Saccharibacteria, Bacteria

Not on your lists

1..750
DNA (750bp) protein (250aa)
TIR protein id=3642759 bin=GWF2_Bacteroidetes_41_31 species=Prosthecochloris aestuarii genus=Prosthecochloris taxon_order=Chlorobiales taxon_class=Chlorobia phylum=Chlorobi tax=GWF2_Bacteroidetes_41_31 organism_group=Bacteroidetes
lipoprotein precursor
Tax=BJP_IG2103_TM7_39_1400
Ig3397_v2_scaffold_1731_2
BJP_IG2103_TM7_39_1400, Candidatus Saccharibacteria, Bacteria

Not on your lists

897..2180
DNA (1284bp) protein (428aa)
putative UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase (EC:6.3.2.10) rbh
UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase n=1 Tax=Candidatus Saccharibacteria bacterium RAAC3_TM7_1 RepID=V5RYS8_9BACT rbh
Tax=BJP_IG2103_TM7_39_1400
Ig3397_v2_scaffold_1731_3
BJP_IG2103_TM7_39_1400, Candidatus Saccharibacteria, Bacteria

Not on your lists


2223..5126
DNA (2904bp) protein (968aa)
leuS; leucyl-tRNA synthetase (EC:6.1.1.4) rbh
Leucyl-tRNA synthetase id=3133420 bin=GWC2_TM7_48_9 species=RAAC3_TM7 genus=RAAC3_TM7 taxon_order=RAAC3_TM7 taxon_class=RAAC3_TM7 phylum=TM7 tax=GWC2_TM7_48_9 organism_group=TM7 organism_desc=Good rbh
Tax=BJP_IG2103_TM7_39_1400
Ig3397_v2_scaffold_1731_4
BJP_IG2103_TM7_39_1400, Candidatus Saccharibacteria, Bacteria

Not on your lists

5196..5345
DNA (150bp) protein (50aa)
id=2442452 bin=GWC2_TM7_44_17 species=RAAC3_TM7 genus=RAAC3_TM7 taxon_order=RAAC3_TM7 taxon_class=RAAC3_TM7 phylum=TM7 tax=GWC2_TM7_44_17 organism_group=TM7 organism_desc=Genome has competed version
hypothetical protein
Tax=BJP_IG2103_TM7_39_1400
Ig3397_v2_scaffold_1731_5
BJP_IG2103_TM7_39_1400, Candidatus Saccharibacteria, Bacteria

Not on your lists

5399..5860
DNA (462bp) protein (154aa)
N utilization substance protein B homolog n=1 Tax=Candidatus Saccharimonas aalborgensis RepID=R4PLY2_9BACT
putative transcription termination factor
Tax=BJP_IG2103_TM7_39_1400
Ig3397_v2_scaffold_1731_6
BJP_IG2103_TM7_39_1400, Candidatus Saccharibacteria, Bacteria

Not on your lists

5838..6335
DNA (498bp) protein (166aa)
NUDIX hydrolase id=2442448 bin=GWC2_TM7_44_17 species=RAAC3_TM7 genus=RAAC3_TM7 taxon_order=RAAC3_TM7 taxon_class=RAAC3_TM7 phylum=TM7 tax=GWC2_TM7_44_17 organism_group=TM7 organism_desc=Genome has competed version
hypothetical protein
Tax=BJP_IG2103_TM7_39_1400
Ig3397_v2_scaffold_1731_7
BJP_IG2103_TM7_39_1400, Candidatus Saccharibacteria, Bacteria

Not on your lists

6332..7054
DNA (723bp) protein (241aa)
putative ribonuclease III (EC:3.1.26.3) rbh
Ribonuclease 3 id=3133429 bin=GWC2_TM7_48_9 species=RAAC3_TM7 genus=RAAC3_TM7 taxon_order=RAAC3_TM7 taxon_class=RAAC3_TM7 phylum=TM7 tax=GWC2_TM7_48_9 organism_group=TM7 organism_desc=Good rbh
Tax=BJP_IG2103_TM7_39_1400
Ig3397_v2_scaffold_1731_8
BJP_IG2103_TM7_39_1400, Candidatus Saccharibacteria, Bacteria

Not on your lists

7119..7796
DNA (678bp) protein (226aa)
Tax=BJP_IG2103_TM7_39_1400
Ig3397_v2_scaffold_1731_9
BJP_IG2103_TM7_39_1400, Candidatus Saccharibacteria, Bacteria

Not on your lists


7941..8273
DNA (333bp) protein (111aa)
30S ribosomal protein S16 id=3133431 bin=GWC2_TM7_48_9 species=RAAC3_TM7 genus=RAAC3_TM7 taxon_order=RAAC3_TM7 taxon_class=RAAC3_TM7 phylum=TM7 tax=GWC2_TM7_48_9 organism_group=TM7 organism_desc=Good
rpsP; 30S ribosomal protein S16
Tax=BJP_IG2103_TM7_39_1400
Ig3397_v2_scaffold_1731_10
BJP_IG2103_TM7_39_1400, Candidatus Saccharibacteria, Bacteria

Not on your lists

8354..8746
DNA (393bp) protein (131aa)
RNA-binding protein (Contains KH domain)-like protein (Fragment) id=2442438 bin=GWC2_TM7_44_17 species=RAAC3_TM7 genus=RAAC3_TM7 taxon_order=RAAC3_TM7 taxon_class=RAAC3_TM7 phylum=TM7 tax=GWC2_TM7_44_17 organism_group=TM7 organism_desc=Genome has competed version
hypothetical protein
Tax=BJP_IG2103_TM7_39_1400
Ig3397_v2_scaffold_1731_11
BJP_IG2103_TM7_39_1400, Candidatus Saccharibacteria, Bacteria

Not on your lists

8904..9557
DNA (654bp) protein (218aa)
tRNA (guanine-N(1)-)-methyltransferase id=2442427 bin=GWC2_TM7_44_17 species=RAAC3_TM7 genus=RAAC3_TM7 taxon_order=RAAC3_TM7 taxon_class=RAAC3_TM7 phylum=TM7 tax=GWC2_TM7_44_17 organism_group=TM7 organism_desc=Genome has competed version rbh
trmD; tRNA(m1G37)methyltransferase rbh
Tax=BJP_IG2103_TM7_39_1400
Ig3397_v2_scaffold_1731_12
BJP_IG2103_TM7_39_1400, Candidatus Saccharibacteria, Bacteria

Not on your lists

9664..9864
DNA (201bp) protein (67aa)
Tax=BJP_IG2103_TM7_39_1400
Ig3397_v2_scaffold_1731_13
BJP_IG2103_TM7_39_1400, Candidatus Saccharibacteria, Bacteria

Not on your lists

10094..10609
DNA (516bp) protein (172aa)
id=2442425 bin=GWC2_TM7_44_17 species=RAAC3_TM7 genus=RAAC3_TM7 taxon_order=RAAC3_TM7 taxon_class=RAAC3_TM7 phylum=TM7 tax=GWC2_TM7_44_17 organism_group=TM7 organism_desc=Genome has competed version
Tax=BJP_IG2103_TM7_39_1400
Ig3397_v2_scaffold_1731_14
BJP_IG2103_TM7_39_1400, Candidatus Saccharibacteria, Bacteria

Not on your lists

10673..11215
DNA (543bp) protein (181aa)
id=2442424 bin=GWC2_TM7_44_17 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_TM7_44_17 organism_group=TM7 organism_desc=Genome has competed version
Tax=BJP_IG2103_TM7_39_1400
Ig3397_v2_scaffold_1731_15
unknown

Not on your lists

comp(11130..11387)
DNA (258bp) protein (86aa)

This feature has no annotations

Ig3397_v2_scaffold_1731_trna_1
unknown

Not on your lists

11290..11361
DNA (72bp)
transferRNA
Ig3397_v2_scaffold_1731_16
BJP_IG2103_TM7_39_1400, Candidatus Saccharibacteria, Bacteria

Not on your lists

comp(11479..12900)
DNA (1422bp) protein (474aa)
Tax=BJP_IG2103_TM7_39_1400
Ig3397_v2_scaffold_1731_17
BJP_IG2103_TM7_39_1400, Candidatus Saccharibacteria, Bacteria

Not on your lists

13159..13395
DNA (237bp) protein (79aa)
Tax=BJP_IG2103_TM7_39_1400
Ig3397_v2_scaffold_1731_18
BJP_IG2103_TM7_39_1400, Candidatus Saccharibacteria, Bacteria

Not on your lists


comp(13654..15027)
DNA (1374bp) protein (458aa)
aspS; aspartyl-tRNA synthetase; K01876 aspartyl-tRNA synthetase [EC:6.1.1.12]
id=5227067 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria) rbh
Tax=BJP_IG2103_TM7_39_1400
Ig3397_v2_scaffold_1731_19
BJP_IG2103_TM7_39_1400, Candidatus Saccharibacteria, Bacteria

Not on your lists

15266..15877
DNA (612bp) protein (204aa)
hypothetical protein n=1 Tax=Aminicenantes bacterium SCGC AAA252-J15 RepID=UPI000372FD28
Tax=BJP_IG2103_TM7_39_1400
Displaying 20 items

View Taxonomy