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RBG_13_scaffold_8097_curated

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Displaying items 1-30 of 37 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RBG_13_scaffold_8097_curated_1
RBG_13_OP11_Shapirobacteria_44_7_curated, Shapirobacteria, Microgenomates, Bacteria

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1..1575
DNA (1575bp) protein (525aa)
putative M3 family peptidase (EC:3.4.24.-); K08602 oligoendopeptidase F [EC:3.4.24.-] rbh
hypothetical protein n=1 Tax=candidate division OP11 bacterium SCGC AAA011-J08 RepID=UPI00035FE06F rbh
Tax=RBG_13_OP11_Shapirobacteria_44_7_curated
RBG_13_scaffold_8097_curated_2
RBG_13_OP11_Shapirobacteria_44_7_curated, Shapirobacteria, Microgenomates, Bacteria

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1577..1855
DNA (279bp) protein (93aa)
phage shock protein C id=5099951 bin=WS6_GWC1_33_20 species=WS6_GWC1_33_22 genus=WS6_GWC1_33_22 taxon_order=WS6_GWC1_33_22 taxon_class=WS6_GWC1_33_22 phylum=WS6 tax=WS6_GWC1_33_20 organism_group=WS6 (Doikabacteria)
Putative stress-responsive transcriptional regulator
Tax=RBG_13_OP11_Shapirobacteria_44_7_curated
RBG_13_scaffold_8097_curated_3
RBG_13_OP11_Shapirobacteria_44_7_curated, Shapirobacteria, Microgenomates, Bacteria

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comp(1857..2384)
DNA (528bp) protein (176aa)
Putative uncharacterized protein n=1 Tax=Legionella drancourtii LLAP12 RepID=G9EN40_9GAMM
Tax=RBG_13_OP11_Shapirobacteria_44_7_curated
RBG_13_scaffold_8097_curated_4
RBG_13_OP11_Shapirobacteria_44_7_curated, Shapirobacteria, Microgenomates, Bacteria

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comp(2381..2941)
DNA (561bp) protein (187aa)
hypothetical protein n=1 Tax=candidate division OP11 bacterium SCGC AAA011-J08 RepID=UPI000373D601
Tax=RBG_13_OP11_Shapirobacteria_44_7_curated
RBG_13_scaffold_8097_curated_5
RBG_13_OP11_Shapirobacteria_44_7_curated, Shapirobacteria, Microgenomates, Bacteria

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comp(2941..3327)
DNA (387bp) protein (129aa)
hypothetical protein n=1 Tax=candidate division OP11 bacterium SCGC AAA011-J08 RepID=UPI0003762130
Tax=RBG_13_OP11_Shapirobacteria_44_7_curated
RBG_13_scaffold_8097_curated_6
RBG_13_OP11_Shapirobacteria_44_7_curated, Shapirobacteria, Microgenomates, Bacteria

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comp(3543..3836)
DNA (294bp) protein (98aa)
P-ATPase superfamily P-type ATPase copper transporter; K01533 Cu2+-exporting ATPase [EC:3.6.3.4]
Copper-translocating P-type ATPase n=1 Tax=Lactobacillus equi DPC 6820 RepID=V7HW33_9LACO
Tax=RBG_13_OP11_Shapirobacteria_44_7_curated
RBG_13_scaffold_8097_curated_7
RBG_13_OP11_Shapirobacteria_44_7_curated, Shapirobacteria, Microgenomates, Bacteria

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comp(5430..6035)
DNA (606bp) protein (202aa)
HAD superfamily hydrolase; K07025 putative hydrolase of the HAD superfamily id=5102550 bin=GWF1_WS6_37_7 species=WS6_GWF1_36_7 genus=WS6_GWF1_36_7 taxon_order=WS6_GWF1_36_7 taxon_class=WS6_GWF1_36_7 phylum=WS6 tax=GWF1_WS6_37_7 organism_group=WS6 (Doikabacteria)
HAD superfamily hydrolase; K07025 putative hydrolase of the HAD superfamily
Tax=RBG_13_OP11_Shapirobacteria_44_7_curated
RBG_13_scaffold_8097_curated_8
RBG_13_OP11_Shapirobacteria_44_7_curated, Shapirobacteria, Microgenomates, Bacteria

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comp(6557..7123)
DNA (567bp) protein (189aa)
hypothetical protein n=1 Tax=candidate division OP11 bacterium SCGC AAA011-J08 RepID=UPI000379CABF
Tax=RBG_13_OP11_Shapirobacteria_44_7_curated
RBG_13_scaffold_8097_curated_9
RBG_13_OP11_Shapirobacteria_44_7_curated, Shapirobacteria, Microgenomates, Bacteria

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comp(7140..8423)
DNA (1284bp) protein (428aa)
Putative uncharacterized protein id=4268947 bin=GWF2_CPR3_35_18 species=Chlorobium ferrooxidans genus=Chlorobium taxon_order=Chlorobiales taxon_class=Chlorobia phylum=Chlorobi tax=GWF2_CPR3_35_18 organism_group=CPR3 rbh
heavy metal transporter
Tax=RBG_13_OP11_Shapirobacteria_44_7_curated
RBG_13_scaffold_8097_curated_10
RBG_13_OP11_Shapirobacteria_44_7_curated, Shapirobacteria, Microgenomates, Bacteria

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comp(8466..8810)
DNA (345bp) protein (115aa)
hypothetical protein n=1 Tax=candidate division OP11 bacterium SCGC AAA011-J08 RepID=UPI00036FEF9D
CopY family transcriptional regulator; K07737 putative transcriptional regulator
Tax=RBG_13_OP11_Shapirobacteria_44_7_curated
RBG_13_scaffold_8097_curated_11
RBG_13_OP11_Shapirobacteria_44_7_curated, Shapirobacteria, Microgenomates, Bacteria

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comp(8828..9130)
DNA (303bp) protein (101aa)
large-conductance mechanosensitive channel-like protein n=1 Tax=Candidatus Nitrosoarchaeum limnia BG20 RepID=UPI00026CE0AF id=5086850 bin=GWF1_OP11_31_35_complete species=Candidatus Nitrosoarchaeum limnia genus=Candidatus Nitrosoarchaeum taxon_order=Nitrosopumilales taxon_class=unknown phylum=Thaumarchaeota tax=GWF1_OP11_31_35_complete organism_group=OP11 (Microgenomates) organism_desc=Complete genome (was OP11_1)
mscL; MscL family large conductance mechanosensitive ion channel protein; K03282 large conductance mechanosensitive channel
Tax=RBG_13_OP11_Shapirobacteria_44_7_curated
RBG_13_scaffold_8097_curated_12
RBG_13_OP11_Shapirobacteria_44_7_curated, Shapirobacteria, Microgenomates, Bacteria

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9151..9711
DNA (561bp) protein (187aa)
Rubrerythrin id=4320223 bin=GWF2_CPR3_35_18 species=ACD58_39_12 genus=ACD58_39_12 taxon_order=ACD58_39_12 taxon_class=ACD58_39_12 phylum=ACD58 tax=GWF2_CPR3_35_18 organism_group=CPR3
rubrerythrin
Tax=RBG_13_OP11_Shapirobacteria_44_7_curated
RBG_13_scaffold_8097_curated_13
RBG_13_OP11_Shapirobacteria_44_7_curated, Shapirobacteria, Microgenomates, Bacteria

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comp(9704..10309)
DNA (606bp) protein (202aa)
HAD-superfamily hydrolase, subfamily IA, variant 3 id=5226327 bin=RAAC3_TM7 species=RAAC3_TM7 genus=RAAC3_TM7 taxon_order=RAAC3_TM7 taxon_class=RAAC3_TM7 phylum=TM7 tax=RAAC3_TM7 organism_group=TM7
Hypothetical protein CBG02952
Tax=RBG_13_OP11_Shapirobacteria_44_7_curated
RBG_13_scaffold_8097_curated_14
RBG_13_OP11_Shapirobacteria_44_7_curated, Shapirobacteria, Microgenomates, Bacteria

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11882..12817
DNA (936bp) protein (312aa)
thioredoxin reductase; K00384 thioredoxin reductase (NADPH) [EC:1.8.1.9] rbh
Thioredoxin reductase n=1 Tax=Leptotrichia hofstadii F0254 RepID=C9N0S5_9FUSO rbh
Tax=RBG_13_OP11_Shapirobacteria_44_7_curated
RBG_13_scaffold_8097_curated_15
RBG_13_OP11_Shapirobacteria_44_7_curated, Shapirobacteria, Microgenomates, Bacteria

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12824..13135
DNA (312bp) protein (104aa)
Tax=RBG_13_OP11_Shapirobacteria_44_7_curated
RBG_13_scaffold_8097_curated_16
RBG_13_OP11_Shapirobacteria_44_7_curated, Shapirobacteria, Microgenomates, Bacteria

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comp(13119..14240)
DNA (1122bp) protein (374aa)
Group 1 glycosyl transferase n=1 Tax=uncultured bacterium RepID=K2BSV7_9BACT rbh
group 1 glycosyl transferase
Tax=RBG_13_OP11_Shapirobacteria_44_7_curated
RBG_13_scaffold_8097_curated_17
RBG_13_OP11_Shapirobacteria_44_7_curated, Shapirobacteria, Microgenomates, Bacteria

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comp(14243..15163)
DNA (921bp) protein (307aa)
DNA polymerase I (EC:2.7.7.7); K02335 DNA polymerase I [EC:2.7.7.7] id=42566 bin=ACD37 species=ACD37 genus=ACD37 taxon_order=ACD37 taxon_class=ACD37 phylum=OP11 tax=ACD37 organism_group=OP11 (Microgenomates) organism_desc=OP11
DNA polymerase I; K02335 DNA polymerase I [EC:2.7.7.7]
Tax=RBG_13_OP11_Shapirobacteria_44_7_curated
RBG_13_scaffold_8097_curated_18
RBG_13_OP11_Shapirobacteria_44_7_curated, Shapirobacteria, Microgenomates, Bacteria

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15224..16138
DNA (915bp) protein (305aa)
id=5086827 bin=GWF1_OP11_31_35_complete species=OP11_1 genus=OP11_1 taxon_order=OP11_1 taxon_class=OP11_1 phylum=OP11 tax=GWF1_OP11_31_35_complete organism_group=OP11 (Microgenomates) organism_desc=Complete genome (was OP11_1)
Tax=RBG_13_OP11_Shapirobacteria_44_7_curated
RBG_13_scaffold_8097_curated_19
RBG_13_OP11_Shapirobacteria_44_7_curated, Shapirobacteria, Microgenomates, Bacteria

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16157..16855
DNA (699bp) protein (233aa)
hypothetical protein id=5084570 bin=GWA2_OP11_43_14 species=GWA2_OP11 genus=GWA2_OP11 taxon_order=GWA2_OP11 taxon_class=GWA2_OP11 phylum=OP11 tax=GWA2_OP11_43_14 organism_group=OP11 (Microgenomates) organism_desc=GWA2_OP11_2
hypothetical protein
Tax=RBG_13_OP11_Shapirobacteria_44_7_curated
RBG_13_scaffold_8097_curated_20
RBG_13_OP11_Beckwithbacteria_35_6_curated, Beckwithbacteria, Microgenomates, Bacteria

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comp(17673..17948)
DNA (276bp) protein (92aa)
Tax=RBG_13_OP11_Beckwithbacteria_35_6_curated
RBG_13_scaffold_8097_curated_21
RBG_13_OP11_Shapirobacteria_44_7_curated, Shapirobacteria, Microgenomates, Bacteria

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18324..19196
DNA (873bp) protein (291aa)
Type IV secretory pathway VirB4 components-like protein n=3 Tax=candidate division TM7 genomosp. GTL1 RepID=A5KS14_9BACT id=5087482 bin=OP11_3 species=candidate division TM7 genomosp. GTL1 genus=unknown taxon_order=unknown taxon_class=unknown phylum=Candidatus Saccharibacteria tax=OP11_3 organism_group=OP11 (Microgenomates) organism_desc=Complete genome
Tax=RBG_13_OP11_Shapirobacteria_44_7_curated
RBG_13_scaffold_8097_curated_22
RBG_13_OP11_Shapirobacteria_44_7_curated, Shapirobacteria, Microgenomates, Bacteria

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19223..22564
DNA (3342bp) protein (1114aa)
M23 family membrane bound metalloendopeptidase id=7721715 bin=CNBR_ACT species=Clavibacter michiganensis genus=Clavibacter taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria
hypothetical protein
Tax=RBG_13_OP11_Shapirobacteria_44_7_curated
RBG_13_scaffold_8097_curated_23
RBG_13_OP11_Shapirobacteria_44_7_curated, Shapirobacteria, Microgenomates, Bacteria

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22584..23576
DNA (993bp) protein (331aa)
Tax=RBG_13_OP11_Shapirobacteria_44_7_curated
RBG_13_scaffold_8097_curated_24
RBG_13_OP11_Shapirobacteria_44_7_curated, Shapirobacteria, Microgenomates, Bacteria

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23573..23959
DNA (387bp) protein (129aa)
Tax=RBG_13_OP11_Shapirobacteria_44_7_curated
RBG_13_scaffold_8097_curated_25
RBG_13_OP11_Shapirobacteria_44_7_curated, Shapirobacteria, Microgenomates, Bacteria

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23960..24220
DNA (261bp) protein (87aa)
Tax=RBG_13_OP11_Shapirobacteria_44_7_curated
RBG_13_scaffold_8097_curated_26
RBG_13_OP11_Shapirobacteria_44_7_curated, Shapirobacteria, Microgenomates, Bacteria

Not on your lists

comp(24210..24671)
DNA (462bp) protein (154aa)
Tax=RBG_13_OP11_Shapirobacteria_44_7_curated
RBG_13_scaffold_8097_curated_27
RBG_13_OP11_Shapirobacteria_44_7_curated, Shapirobacteria, Microgenomates, Bacteria

Not on your lists

comp(24676..25803)
DNA (1128bp) protein (376aa)
DNA polymerase III subunit beta (EC:2.7.7.7); K02338 DNA polymerase III subunit beta [EC:2.7.7.7] id=15190849 bin=GWC1_OP11_49_16_COMPLETE species=unknown genus=unknown taxon_order=unknown taxon_class=Dehalococcoidia phylum=Chloroflexi tax=GWC1_OP11_49_16_COMPLETE organism_group=OP11 (Microgenomates)
DNA polymerase III subunit beta (EC:2.7.7.7); K02338 DNA polymerase III subunit beta [EC:2.7.7.7]
Tax=RBG_13_OP11_Shapirobacteria_44_7_curated
RBG_13_scaffold_8097_curated_28
RBG_13_OP11_Shapirobacteria_44_7_curated, Shapirobacteria, Microgenomates, Bacteria

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26107..26400
DNA (294bp) protein (98aa)
Tax=RBG_13_OP11_Shapirobacteria_44_7_curated
RBG_13_scaffold_8097_curated_29
RBG_13_OP11_Shapirobacteria_44_7_curated, Shapirobacteria, Microgenomates, Bacteria

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26413..26775
DNA (363bp) protein (121aa)
Tax=RBG_13_OP11_Shapirobacteria_44_7_curated
RBG_13_scaffold_8097_curated_30
RBG_13_OP11_Shapirobacteria_44_7_curated, Shapirobacteria, Microgenomates, Bacteria

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26797..27042
DNA (246bp) protein (82aa)
Tax=RBG_13_OP11_Shapirobacteria_44_7_curated
Displaying items 1-30 of 37 in total

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