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rifcsphigho2_12_scaffold_338_curated

Search features with annotation key words

Displaying items 1-30 of 326 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsphigho2_12_scaffold_338_curated_1
R_OP11_Beckwithbacteria_49_39, Beckwithbacteria, Microgenomates, Bacteria

Not on your lists

291..989
DNA (699bp) protein (233aa)
hypothetical protein id=15190851 bin=GWC1_OP11_49_16_COMPLETE species=GWA2_OP11 genus=GWA2_OP11 taxon_order=GWA2_OP11 taxon_class=GWA2_OP11 phylum=OP11 tax=GWC1_OP11_49_16_COMPLETE organism_group=OP11 (Microgenomates) rbh
hypothetical protein
Tax=RIFCSPHIGHO2_01_FULL_OP11_Beckwithbacteria_49_39_curated
rifcsphigho2_12_scaffold_338_curated_2
R_OP11_Beckwithbacteria_49_39, Beckwithbacteria, Microgenomates, Bacteria

Not on your lists

986..2872
DNA (1887bp) protein (629aa)
Type IV secretory pathway VirB4 components-like protein id=15190850 bin=GWC1_OP11_49_16_COMPLETE species=OP11_3 genus=OP11_3 taxon_order=OP11_3 taxon_class=OP11_3 phylum=OP11 tax=GWC1_OP11_49_16_COMPLETE organism_group=OP11 (Microgenomates) rbh
Type IV secretory pathway VirB4 components-like protein rbh
Tax=RIFCSPHIGHO2_01_FULL_OP11_Beckwithbacteria_49_39_curated
rifcsphigho2_12_scaffold_338_curated_3
R_OP11_Beckwithbacteria_49_39, Beckwithbacteria, Microgenomates, Bacteria

Not on your lists

comp(2847..3968)
DNA (1122bp) protein (374aa)
DNA polymerase III subunit beta (EC:2.7.7.7); K02338 DNA polymerase III subunit beta [EC:2.7.7.7] id=15190849 bin=GWC1_OP11_49_16_COMPLETE species=unknown genus=unknown taxon_order=unknown taxon_class=Dehalococcoidia phylum=Chloroflexi tax=GWC1_OP11_49_16_COMPLETE organism_group=OP11 (Microgenomates) rbh
DNA polymerase III subunit beta (EC:2.7.7.7); K02338 DNA polymerase III subunit beta [EC:2.7.7.7]
Tax=RIFCSPHIGHO2_01_FULL_OP11_Beckwithbacteria_49_39_curated
rifcsphigho2_12_scaffold_338_curated_4
R_OP11_Beckwithbacteria_49_39, Beckwithbacteria, Microgenomates, Bacteria

Not on your lists

comp(3984..4148)
DNA (165bp) protein (55aa)
id=15190848 bin=GWC1_OP11_49_16_COMPLETE tax=GWC1_OP11_49_16_COMPLETE organism_group=OP11 (Microgenomates)
Tax=RIFCSPHIGHO2_01_FULL_OP11_Beckwithbacteria_49_39_curated
rifcsphigho2_12_scaffold_338_curated_5
GWB1_OP11_47_15, Beckwithbacteria, Microgenomates, Bacteria

Not on your lists

comp(4148..5551)
DNA (1404bp) protein (468aa)
dnaA; chromosomal replication initiator protein DnaA; K02313 chromosomal replication initiator protein id=15190847 bin=GWC1_OP11_49_16_COMPLETE species=ACD13 genus=ACD13 taxon_order=ACD13 taxon_class=ACD13 phylum=OP11 tax=GWC1_OP11_49_16_COMPLETE organism_group=OP11 (Microgenomates) rbh
Chromosomal replication initiator protein DnaA {ECO:0000313|EMBL:KKU61792.1}; TaxID=1618371 species="Bacteria; Microgenomates.;" source="Microgenomates (Beckwithbacteria) bacterium GW2011_GWB1_47_15.;"
dnaA; chromosomal replication initiator protein DnaA; K02313 chromosomal replication initiator protein rbh
rifcsphigho2_12_scaffold_338_curated_6
R_OP11_Beckwithbacteria_49_39, Beckwithbacteria, Microgenomates, Bacteria

Not on your lists


5682..5819
DNA (138bp) protein (46aa)
50S ribosomal protein L34; K02914 large subunit ribosomal protein L34 id=15190846 bin=GWC1_OP11_49_16_COMPLETE species=Polaribacter irgensii genus=Polaribacter taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWC1_OP11_49_16_COMPLETE organism_group=OP11 (Microgenomates)
50S ribosomal protein L34; K02914 large subunit ribosomal protein L34
Tax=RIFCSPHIGHO2_01_FULL_OP11_Beckwithbacteria_49_39_curated
rifcsphigho2_12_scaffold_338_curated_7
R_OP11_Beckwithbacteria_49_39, Beckwithbacteria, Microgenomates, Bacteria

Not on your lists

5860..6144
DNA (285bp) protein (95aa)
id=15190845 bin=GWC1_OP11_49_16_COMPLETE tax=GWC1_OP11_49_16_COMPLETE organism_group=OP11 (Microgenomates)
Tax=RIFCSPHIGHO2_01_FULL_OP11_Beckwithbacteria_49_39_curated
rifcsphigho2_12_scaffold_338_curated_8
R_OP11_Beckwithbacteria_49_39, Beckwithbacteria, Microgenomates, Bacteria

Not on your lists

6116..6328
DNA (213bp) protein (71aa)
alpha-hemolysin; K08998 hypothetical protein id=15190844 bin=GWC1_OP11_49_16_COMPLETE species=ACD12 genus=ACD12 taxon_order=ACD12 taxon_class=ACD12 phylum=OP11 tax=GWC1_OP11_49_16_COMPLETE organism_group=OP11 (Microgenomates)
alpha-hemolysin; K08998 hypothetical protein
Tax=RIFCSPHIGHO2_01_FULL_OP11_Beckwithbacteria_49_39_curated
rifcsphigho2_12_scaffold_338_curated_9
GWB1_OP11_47_15, Beckwithbacteria, Microgenomates, Bacteria

Not on your lists

6333..7121
DNA (789bp) protein (263aa)
hypothetical protein; K03217 preprotein translocase subunit YidC id=15190843 bin=GWC1_OP11_49_16_COMPLETE species=OP11_1 genus=OP11_1 taxon_order=OP11_1 taxon_class=OP11_1 phylum=OP11 tax=GWC1_OP11_49_16_COMPLETE organism_group=OP11 (Microgenomates) rbh
Membrane protein insertase, YidC/Oxa1 family {ECO:0000313|EMBL:KKU61794.1}; TaxID=1618371 species="Bacteria; Microgenomates.;" source="Microgenomates (Beckwithbacteria) bacterium GW2011_GWB1_47_15.;"
hypothetical protein; K03217 preprotein translocase subunit YidC
rifcsphigho2_12_scaffold_338_curated_10
R_OP11_Beckwithbacteria_49_39, Beckwithbacteria, Microgenomates, Bacteria

Not on your lists

7105..7569
DNA (465bp) protein (155aa)
single-stranded nucleic acid binding R3H domain-containing protein; K06346 spoIIIJ-associated protein id=15190842 bin=GWC1_OP11_49_16_COMPLETE species=RAAC19 genus=RAAC19 taxon_order=RAAC19 taxon_class=RAAC19 phylum=OP11 tax=GWC1_OP11_49_16_COMPLETE organism_group=OP11 (Microgenomates) rbh
single-stranded nucleic acid binding R3H domain-containing protein; K06346 spoIIIJ-associated protein
Tax=RIFCSPHIGHO2_01_FULL_OP11_Beckwithbacteria_49_39_curated
rifcsphigho2_12_scaffold_338_curated_11
GWB1_OP11_47_15, Beckwithbacteria, Microgenomates, Bacteria

Not on your lists

7556..7981
DNA (426bp) protein (142aa)
rnhA; ribonuclease HI (EC:3.1.26.4); K03469 ribonuclease HI [EC:3.1.26.4] id=15190841 bin=GWC1_OP11_49_16_COMPLETE species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC1_OP11_49_16_COMPLETE organism_group=OP11 (Microgenomates)
rnhA; ribonuclease HI (EC:3.1.26.4); K03469 ribonuclease HI [EC:3.1.26.4]
Ribonuclease H {ECO:0000313|EMBL:KKU61796.1}; TaxID=1618371 species="Bacteria; Microgenomates.;" source="Microgenomates (Beckwithbacteria) bacterium GW2011_GWB1_47_15.;"
rifcsphigho2_12_scaffold_338_curated_12
R_OP11_Beckwithbacteria_49_39, Beckwithbacteria, Microgenomates, Bacteria

Not on your lists

8087..11173
DNA (3087bp) protein (1029aa)
nucleoside-diphosphate-sugar epimerase id=15190840 bin=GWC1_OP11_49_16_COMPLETE species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC1_OP11_49_16_COMPLETE organism_group=OP11 (Microgenomates) rbh
nucleoside-diphosphate-sugar epimerase
Tax=RIFCSPHIGHO2_01_FULL_OP11_Beckwithbacteria_49_39_curated
rifcsphigho2_12_scaffold_338_curated_13
R_OP11_Beckwithbacteria_49_39, Beckwithbacteria, Microgenomates, Bacteria

Not on your lists


11201..11929
DNA (729bp) protein (243aa)
ctc; 50S ribosomal protein L25; K02897 large subunit ribosomal protein L25 id=15190839 bin=GWC1_OP11_49_16_COMPLETE species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC1_OP11_49_16_COMPLETE organism_group=OP11 (Microgenomates) rbh
ctc; 50S ribosomal protein L25; K02897 large subunit ribosomal protein L25
Tax=RIFCSPHIGHO2_01_FULL_OP11_Beckwithbacteria_49_39_curated
rifcsphigho2_12_scaffold_338_curated_14
R_OP11_Beckwithbacteria_49_39, Beckwithbacteria, Microgenomates, Bacteria

Not on your lists

comp(11913..12362)
DNA (450bp) protein (150aa)
id=15190838 bin=GWC1_OP11_49_16_COMPLETE tax=GWC1_OP11_49_16_COMPLETE organism_group=OP11 (Microgenomates) rbh
Tax=RIFCSPHIGHO2_01_FULL_OP11_Beckwithbacteria_49_39_curated
rifcsphigho2_12_scaffold_338_curated_15
R_OP11_Beckwithbacteria_49_39, Beckwithbacteria, Microgenomates, Bacteria

Not on your lists


comp(12350..14581)
DNA (2232bp) protein (744aa)
valS; valyl-tRNA synthetase (EC:6.1.1.9); K01873 valyl-tRNA synthetase [EC:6.1.1.9] id=15190837 bin=GWC1_OP11_49_16_COMPLETE species=OP11_3 genus=OP11_3 taxon_order=OP11_3 taxon_class=OP11_3 phylum=OP11 tax=GWC1_OP11_49_16_COMPLETE organism_group=OP11 (Microgenomates) rbh
valS; valyl-tRNA synthetase (EC:6.1.1.9); K01873 valyl-tRNA synthetase [EC:6.1.1.9] rbh
Tax=RIFCSPHIGHO2_01_FULL_OP11_Beckwithbacteria_49_39_curated
rifcsphigho2_12_scaffold_338_curated_16
GWB1_OP11_47_15, Beckwithbacteria, Microgenomates, Bacteria

Not on your lists

comp(14680..15627)
DNA (948bp) protein (316aa)
Lactate dehydrogenase-like dehydrogenase id=15190836 bin=GWC1_OP11_49_16_COMPLETE species=OP11_3 genus=OP11_3 taxon_order=OP11_3 taxon_class=OP11_3 phylum=OP11 tax=GWC1_OP11_49_16_COMPLETE organism_group=OP11 (Microgenomates) rbh
Uncharacterized protein {ECO:0000313|EMBL:KKU61801.1}; TaxID=1618371 species="Bacteria; Microgenomates.;" source="Microgenomates (Beckwithbacteria) bacterium GW2011_GWB1_47_15.;"
Lactate dehydrogenase-like dehydrogenase
rifcsphigho2_12_scaffold_338_curated_17
R_OP11_Beckwithbacteria_49_39, Beckwithbacteria, Microgenomates, Bacteria

Not on your lists

15659..16147
DNA (489bp) protein (163aa)
ruvC; crossover junction endodeoxyribonuclease (EC:3.1.22.4); K01159 crossover junction endodeoxyribonuclease RuvC [EC:3.1.22.4] id=15190835 bin=GWC1_OP11_49_16_COMPLETE species=Brevibacillus brevis genus=Brevibacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWC1_OP11_49_16_COMPLETE organism_group=OP11 (Microgenomates) rbh
ruvC; crossover junction endodeoxyribonuclease (EC:3.1.22.4); K01159 crossover junction endodeoxyribonuclease RuvC [EC:3.1.22.4]
Tax=RIFCSPHIGHO2_01_FULL_OP11_Beckwithbacteria_49_39_curated
rifcsphigho2_12_scaffold_338_curated_18
R_OP11_Beckwithbacteria_49_39, Beckwithbacteria, Microgenomates, Bacteria

Not on your lists

16152..16727
DNA (576bp) protein (192aa)
Holliday junction ATP-dependent DNA helicase ruvA; K03550 holliday junction DNA helicase RuvA [EC:3.6.4.12] id=15190834 bin=GWC1_OP11_49_16_COMPLETE species=ACD48 genus=ACD48 taxon_order=ACD48 taxon_class=ACD48 phylum=OP11 tax=GWC1_OP11_49_16_COMPLETE organism_group=OP11 (Microgenomates) rbh
Holliday junction ATP-dependent DNA helicase ruvA; K03550 holliday junction DNA helicase RuvA [EC:3.6.4.12]
Tax=RIFCSPHIGHO2_01_FULL_OP11_Beckwithbacteria_49_39_curated
rifcsphigho2_12_scaffold_338_curated_19
R_OP11_Beckwithbacteria_49_39, Beckwithbacteria, Microgenomates, Bacteria

Not on your lists

16724..17710
DNA (987bp) protein (329aa)
ruvB; Holliday junction DNA helicase RuvB (EC:3.1.22.4); K03551 holliday junction DNA helicase RuvB [EC:3.6.4.12] id=15190833 bin=GWC1_OP11_49_16_COMPLETE species=ACD50 genus=ACD50 taxon_order=ACD50 taxon_class=ACD50 phylum=OP11 tax=GWC1_OP11_49_16_COMPLETE organism_group=OP11 (Microgenomates) rbh
ruvB; Holliday junction DNA helicase RuvB (EC:3.1.22.4); K03551 holliday junction DNA helicase RuvB [EC:3.6.4.12] rbh
Tax=RIFCSPHIGHO2_01_FULL_OP11_Beckwithbacteria_49_39_curated
rifcsphigho2_12_scaffold_338_curated_20
R_OP11_Beckwithbacteria_49_39, Beckwithbacteria, Microgenomates, Bacteria

Not on your lists

17707..18561
DNA (855bp) protein (285aa)
spermidine synthase; K00797 spermidine synthase [EC:2.5.1.16] id=15190832 bin=GWC1_OP11_49_16_COMPLETE species=Clostridium sp. MSTE9 genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC1_OP11_49_16_COMPLETE organism_group=OP11 (Microgenomates) rbh
spermidine synthase; K00797 spermidine synthase [EC:2.5.1.16]
Tax=RIFCSPHIGHO2_01_FULL_OP11_Beckwithbacteria_49_39_curated
rifcsphigho2_12_scaffold_338_curated_21
R_OP11_Beckwithbacteria_49_39, Beckwithbacteria, Microgenomates, Bacteria

Not on your lists

comp(18554..18880)
DNA (327bp) protein (109aa)
CutA1 divalent ion tolerance protein; K03926 periplasmic divalent cation tolerance protein id=15190831 bin=GWC1_OP11_49_16_COMPLETE species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC1_OP11_49_16_COMPLETE organism_group=OP11 (Microgenomates)
CutA1 divalent ion tolerance protein; K03926 periplasmic divalent cation tolerance protein
Tax=RIFCSPHIGHO2_01_FULL_OP11_Beckwithbacteria_49_39_curated
rifcsphigho2_12_scaffold_338_curated_22
GWB1_OP11_47_15, Beckwithbacteria, Microgenomates, Bacteria

Not on your lists

comp(18890..21184)
DNA (2295bp) protein (765aa)
acyl-CoA synthetase/AMP-acid ligase II (EC:6.2.1.3) id=15190830 bin=GWC1_OP11_49_16_COMPLETE species=ACD38 genus=ACD38 taxon_order=ACD38 taxon_class=ACD38 phylum=OP11 tax=GWC1_OP11_49_16_COMPLETE organism_group=OP11 (Microgenomates) rbh
acyl-CoA synthetase/AMP-acid ligase II (EC:6.2.1.3)
AMP-dependent synthetase and ligase {ECO:0000313|EMBL:KKU61807.1}; TaxID=1618371 species="Bacteria; Microgenomates.;" source="Microgenomates (Beckwithbacteria) bacterium GW2011_GWB1_47_15.;"
rifcsphigho2_12_scaffold_338_curated_23
R_OP11_Beckwithbacteria_49_39, Beckwithbacteria, Microgenomates, Bacteria

Not on your lists

comp(21196..22383)
DNA (1188bp) protein (396aa)
id=15190829 bin=GWC1_OP11_49_16_COMPLETE tax=GWC1_OP11_49_16_COMPLETE organism_group=OP11 (Microgenomates) rbh
Tax=RIFCSPHIGHO2_01_FULL_OP11_Beckwithbacteria_49_39_curated
rifcsphigho2_12_scaffold_338_curated_24
GWB1_OP11_47_15, Beckwithbacteria, Microgenomates, Bacteria

Not on your lists

comp(22391..24169)
DNA (1779bp) protein (593aa)
Uncharacterized protein {ECO:0000313|EMBL:KKU61809.1}; TaxID=1618371 species="Bacteria; Microgenomates.;" source="Microgenomates (Beckwithbacteria) bacterium GW2011_GWB1_47_15.;"
hypothetical protein id=15190828 bin=GWC1_OP11_49_16_COMPLETE species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC1_OP11_49_16_COMPLETE organism_group=OP11 (Microgenomates) rbh
hypothetical protein
rifcsphigho2_12_scaffold_338_curated_25
R_OP11_Beckwithbacteria_49_39, Beckwithbacteria, Microgenomates, Bacteria

Not on your lists

24210..25709
DNA (1500bp) protein (500aa)
ABC-type sugar transport system, periplasmic component id=15190827 bin=GWC1_OP11_49_16_COMPLETE species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC1_OP11_49_16_COMPLETE organism_group=OP11 (Microgenomates) rbh
ABC-type sugar transport system, periplasmic component
Tax=RIFCSPHIGHO2_01_FULL_OP11_Beckwithbacteria_49_39_curated
rifcsphigho2_12_scaffold_338_curated_26
R_OP11_Beckwithbacteria_49_39, Beckwithbacteria, Microgenomates, Bacteria

Not on your lists

25709..27097
DNA (1389bp) protein (463aa)
hypothetical protein id=15190826 bin=GWC1_OP11_49_16_COMPLETE species=OP11_1 genus=OP11_1 taxon_order=OP11_1 taxon_class=OP11_1 phylum=OP11 tax=GWC1_OP11_49_16_COMPLETE organism_group=OP11 (Microgenomates) rbh
hypothetical protein
Tax=RIFCSPHIGHO2_01_FULL_OP11_Beckwithbacteria_49_39_curated
rifcsphigho2_12_scaffold_338_curated_27
R_OP11_Beckwithbacteria_49_39, Beckwithbacteria, Microgenomates, Bacteria

Not on your lists

27094..27564
DNA (471bp) protein (157aa)
acyl-CoA N-acyltransferase id=15190825 bin=GWC1_OP11_49_16_COMPLETE species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC1_OP11_49_16_COMPLETE organism_group=OP11 (Microgenomates) rbh
acyl-CoA N-acyltransferase
Tax=RIFCSPHIGHO2_01_FULL_OP11_Beckwithbacteria_49_39_curated
rifcsphigho2_12_scaffold_338_curated_28
R_OP11_Beckwithbacteria_49_39, Beckwithbacteria, Microgenomates, Bacteria

Not on your lists

27566..28327
DNA (762bp) protein (254aa)
hypothetical protein id=15190824 bin=GWC1_OP11_49_16_COMPLETE species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GWC1_OP11_49_16_COMPLETE organism_group=OP11 (Microgenomates) rbh
hypothetical protein
Tax=RIFCSPHIGHO2_01_FULL_OP11_Beckwithbacteria_49_39_curated
rifcsphigho2_12_scaffold_338_curated_29
R_OP11_Beckwithbacteria_49_39, Beckwithbacteria, Microgenomates, Bacteria

Not on your lists

comp(28314..28703)
DNA (390bp) protein (130aa)
hypothetical protein id=15190823 bin=GWC1_OP11_49_16_COMPLETE species=ACD24 genus=ACD24 taxon_order=ACD24 taxon_class=ACD24 phylum=WWE3 tax=GWC1_OP11_49_16_COMPLETE organism_group=OP11 (Microgenomates)
hypothetical protein
Tax=RIFCSPHIGHO2_01_FULL_OP11_Beckwithbacteria_49_39_curated
rifcsphigho2_12_scaffold_338_curated_30
R_OP11_Beckwithbacteria_49_39, Beckwithbacteria, Microgenomates, Bacteria

Not on your lists

comp(28684..28926)
DNA (243bp) protein (81aa)
AbrB/MazE/MraZ-like id=15190822 bin=GWC1_OP11_49_16_COMPLETE species=ACD24 genus=ACD24 taxon_order=ACD24 taxon_class=ACD24 phylum=WWE3 tax=GWC1_OP11_49_16_COMPLETE organism_group=OP11 (Microgenomates)
Tax=RIFCSPHIGHO2_01_FULL_OP11_Beckwithbacteria_49_39_curated
Displaying items 1-30 of 326 in total

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