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gwc1_scaffold_5105

Alias: GWC1_OD1_rel_43_10_19

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
gwc1_scaffold_5105_1
GWA1_OD1_Wolfebacteria_42_9_curated, Wolfebacteria, Parcubacteria, Bacteria

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67..1266
DNA (1200bp) protein (400aa)
tuf1; elongation factor Tu; K02358 elongation factor Tu Tax=GWA1_OD1_Wolfebacteria_42_9_curated
tuf2; elongation factor Tu
Elongation factor Tu
gwc1_scaffold_5105_2

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1362..1691
DNA (330bp) protein (110aa)
30S ribosomal protein S10 {ECO:0000313|EMBL:KKT22954.1}; TaxID=1618875 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWB1_43_8b.;"
rpsJ; 30S ribosomal protein S10
ribosomal protein S10; K02946 small subunit ribosomal protein S10 alias=ACD81_2969.98551.54G0068,ACD81_2969.98551.54_68,ACD81_C00011G00068 id=133291 tax=ACD81 species=Thermobaculum terrenum genus=Thermobaculum taxon_order=unknown taxon_class=unknown phylum=unknown organism_group=OD1, not OD1-i organism_desc=OD1
gwc1_scaffold_5105_3

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comp(1707..1814)
DNA (108bp) protein (36aa)
Uncharacterized protein {ECO:0000313|EMBL:KKT22955.1}; TaxID=1618875 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWB1_43_8b.;"
gwc1_scaffold_5105_4
GWA1_OD1_Wolfebacteria_42_9_curated, Wolfebacteria, Parcubacteria, Bacteria

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2155..2781
DNA (627bp) protein (209aa)
50S ribosomal protein L3; K02906 large subunit ribosomal protein L3 Tax=GWA1_OD1_Wolfebacteria_42_9_curated
50S ribosomal protein L3
50S ribosomal protein L3; K02906 large subunit ribosomal protein L3 alias=ACD81_C00041G00019,ACD81_2348.15643.51G0019,ACD81_2348.15643.51_19 id=133706 tax=ACD81 species=Dehalogenimonas lykanthroporepellens genus=Dehalogenimonas taxon_order=unknown taxon_class=Dehalococcoidetes phylum=Chloroflexi organism_group=OD1, not OD1-i organism_desc=OD1
gwc1_scaffold_5105_5

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2866..3501
DNA (636bp) protein (212aa)
Ribosomal protein L4/L1e, large subunit ribosomal protein L4 {ECO:0000313|EMBL:KKS81774.1}; TaxID=1619011 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Wolfebacteria) bacterium GW2011_GWC
50S ribosomal protein L4
ribosomal protein L4/L1e; K02926 large subunit ribosomal protein L4 alias=ACD81_C00041G00018,ACD81_2348.15643.51G0018,ACD81_2348.15643.51_18 id=133705 tax=ACD81 species=Thermincola potens genus=Thermincola taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes organism_group=OD1, not OD1-i organism_desc=OD1
gwc1_scaffold_5105_6
GWA1_OD1_Wolfebacteria_42_9_curated, Wolfebacteria, Parcubacteria, Bacteria

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3624..4010
DNA (387bp) protein (129aa)
rplW; 50S ribosomal protein L23; K02892 large subunit ribosomal protein L23 Tax=GWA1_OD1_Wolfebacteria_42_9_curated
rplW; 50S ribosomal protein L23
rlpW; RplW 50S ribosomal protein L23; K02892 large subunit ribosomal protein L23 alias=ACD81_C00041G00017,ACD81_2348.15643.51G0017,ACD81_2348.15643.51_17 id=133704 tax=ACD81 species=Scardovia inopinata genus=Scardovia taxon_order=Bifidobacteriales taxon_class=Actinobacteria phylum=Actinobacteria organism_group=OD1, not OD1-i organism_desc=OD1
gwc1_scaffold_5105_7

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4120..4947
DNA (828bp) protein (276aa)
50S ribosomal protein L2 {ECO:0000313|EMBL:KKS81776.1}; TaxID=1619011 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Wolfebacteria) bacterium GW2011_GWC1_43_10.;"
rplB; 50S ribosomal protein L2
50S ribosomal protein L2
gwc1_scaffold_5105_8

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5055..5372
DNA (318bp) protein (106aa)
30S ribosomal protein S19P, small subunit ribosomal protein S19 {ECO:0000313|EMBL:KKS81777.1}; TaxID=1619011 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Wolfebacteria) bacterium GW2011_
30S ribosomal protein S19
30S ribosomal protein S19P; K02965 small subunit ribosomal protein S19 alias=ACD76_C00035G00012,ACD76_3574.37267.19G0012,ACD76_3574.37267.19_12 id=120515 tax=ACD76 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria organism_group=OD1, not OD1-i organism_desc=OD1
gwc1_scaffold_5105_9
GWA1_OD1_Wolfebacteria_42_9_curated, Wolfebacteria, Parcubacteria, Bacteria

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5380..5970
DNA (591bp) protein (197aa)
50S ribosomal protein L22; K02890 large subunit ribosomal protein L22 Tax=GWA1_OD1_Wolfebacteria_42_9_curated
50S ribosomal protein L22
Ribosomal protein L22 alias=gwe2_scaffold_363_39 id=1990102 tax=GWE2_OD1_ACD81_47_12 species=Mycobacterium hassiacum DSM 44199 genus=Mycobacterium taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria
gwc1_scaffold_5105_10

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5975..6661
DNA (687bp) protein (229aa)
30S ribosomal protein S3 {ECO:0000313|EMBL:AGT99648.1}; TaxID=155900 species="unclassified sequences; environmental samples.;" source="uncultured organism.;"
30S ribosomal protein S3
hypothetical protein; K02982 small subunit ribosomal protein S3 alias=ACD81_C00041G00013,ACD81_2348.15643.51G0013,ACD81_2348.15643.51_13 id=133698 tax=ACD81 species=Ruminococcus flavefaciens genus=Ruminococcus taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes organism_group=OD1, not OD1-i organism_desc=OD1
gwc1_scaffold_5105_11

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6816..7226
DNA (411bp) protein (137aa)
Ribosomal protein L16, large subunit ribosomal protein L16 {ECO:0000313|EMBL:KKS81780.1}; TaxID=1619011 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Wolfebacteria) bacterium GW2011_GWC1_
rplP; 50S ribosomal protein L16
ribosomal protein L16; K02878 large subunit ribosomal protein L16 alias=ACD81_C00041G00012,ACD81_2348.15643.51G0012,ACD81_2348.15643.51_12 id=133701 tax=ACD81 species=Thermobaculum terrenum genus=Thermobaculum taxon_order=unknown taxon_class=unknown phylum=unknown organism_group=OD1, not OD1-i organism_desc=OD1
gwc1_scaffold_5105_12
GWA1_OD1_Wolfebacteria_42_9_curated, Wolfebacteria, Parcubacteria, Bacteria

Not on your lists

7231..7431
DNA (201bp) protein (67aa)
coiled-coil 59..80 alias=ACD13_11237.143636.20G0020,ACD13_11237.143636.20_20,ACD13_C00029G00020 id=7007 tax=ACD13 species=OP11 genus=unknown taxon_order=unknown taxon_class=unknown phylum=OP11 organism_group=OP11 organism_desc=OP11
Tax=GWA1_OD1_Wolfebacteria_42_9_curated
gwc1_scaffold_5105_13

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7424..7723
DNA (300bp) protein (100aa)
30S ribosomal protein S17 {ECO:0000313|EMBL:KKS81782.1}; TaxID=1619011 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Wolfebacteria) bacterium GW2011_GWC1_43_10.;"
30S ribosomal protein S17
30S ribosomal protein S17
gwc1_scaffold_5105_14
GWA1_OD1_Wolfebacteria_42_9_curated, Wolfebacteria, Parcubacteria, Bacteria

Not on your lists


7728..8096
DNA (369bp) protein (123aa)
50S ribosomal protein L14; K02874 large subunit ribosomal protein L14 Tax=GWA1_OD1_Wolfebacteria_42_9_curated
50S ribosomal protein L14
50S ribosomal protein L14
gwc1_scaffold_5105_15

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8262..8567
DNA (306bp) protein (102aa)
50S ribosomal protein L24 {ECO:0000313|EMBL:KKS81784.1}; TaxID=1619011 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Wolfebacteria) bacterium GW2011_GWC1_43_10.;"
50S ribosomal protein L24
50S ribosomal protein L24
gwc1_scaffold_5105_16

Not on your lists


8594..9154
DNA (561bp) protein (187aa)
50S ribosomal protein L5 {ECO:0000313|EMBL:KKS81785.1}; TaxID=1619011 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Wolfebacteria) bacterium GW2011_GWC1_43_10.;"
RplE; 50S ribosomal protein L5
50S ribosomal protein L5
Displaying 16 items

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