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AR1-0.1_scaffold_40

Search features with annotation key words

Displaying items 1-30 of 35 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
AR1-0.1_scaffold_40_1
Sphingobacterium spiritivorum, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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158..3694
DNA (3537bp) protein (1179aa)
Bacterial surface protein 26-residue PARCEL repeat (3 repeats) n=1 Tax=Sphingobacterium spiritivorum ATCC 33861 RepID=D7VPP4_9SPHI
Bacterial surface protein 26-residue PARCEL repeat (3 repeats) {ECO:0000313|EMBL:EFK57891.1}; TaxID=525373 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium spiritivorum ATCC 33861.;"
membrane protein
AR1-0.1_scaffold_40_2
Providencia alcalifaciens, Providencia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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3791..5269
DNA (1479bp) protein (493aa)
tRNA sulfurtransferase {ECO:0000256|HAMAP-Rule:MF_00021, ECO:0000256|SAAS:SAAS00022963}; EC=2.8.1.4 {ECO:0000256|HAMAP-Rule:MF_00021, ECO:0000256|SAAS:SAAS00094270};; Sulfur carrier protein ThiS sulfurtransferase {ECO:0000256|HAMAP-Rule:MF_00021}; Thiamine biosynthesis protein ThiI {ECO:0000256|HAMAP-Rule:MF_00021}; tRNA 4-thiouridine synthase {ECO:0000256|HAMAP-Rule:MF_00021}; TaxID=520999 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Providencia.;" source="
tRNA sulfurtransferase n=1 Tax=Providencia alcalifaciens DSM 30120 RepID=B6XA68_9ENTR rbh
thiI; thiamine biosynthesis protein ThiI rbh
AR1-0.1_scaffold_40_3

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comp(5320..5535)
DNA (216bp) protein (72aa)
Ribosomal protein S18 n=1 Tax=sediment metagenome RepID=D9PJ92_9ZZZZ
Ribosomal protein S18 {ECO:0000313|EMBL:EFK96369.1}; TaxID=749907 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="sediment metagenome.;"
rpsR; 30S ribosomal protein S18
AR1-0.1_scaffold_40_4

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comp(5558..5956)
DNA (399bp) protein (133aa)
single-strand binding protein; K03111 single-strand DNA-binding protein id=34715 bin=ACD2 species=ACD2 genus=ACD2 taxon_order=ACD2 taxon_class=ACD2 phylum=BD1-5 tax=ACD2 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5
Single-stranded DNA-binding protein {ECO:0000256|HAMAP-Rule:MF_00984, ECO:0000256|PIRNR:PIRNR002070}; Short=SSB {ECO:0000256|HAMAP-Rule:MF_00984};; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
ssb; single-strand binding protein
AR1-0.1_scaffold_40_5

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comp(5985..6269)
DNA (285bp) protein (95aa)
30S ribosomal protein S6 n=1 Tax=uncultured bacterium (gcode 4) RepID=K2FYP0_9BACT
30S ribosomal protein S6 {ECO:0000256|HAMAP-Rule:MF_00360}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
rpsF; SSU ribosomal protein S6P
AR1-0.1_scaffold_40_6

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6498..7397
DNA (900bp) protein (300aa)
GTPase Era n=1 Tax=uncultured bacterium (gcode 4) RepID=K2AFP6_9BACT
GTPase Era {ECO:0000256|HAMAP-Rule:MF_00367, ECO:0000256|SAAS:SAAS00085723}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
putative GTP-binding protein
AR1-0.1_scaffold_40_7

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comp(7414..7842)
DNA (429bp) protein (143aa)
Uncharacterized protein n=1 Tax=uncultured bacterium (gcode 4) RepID=K2F495_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EKE25961.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
AR1-0.1_scaffold_40_8

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comp(7866..10334)
DNA (2469bp) protein (823aa)
Uncharacterized protein n=1 Tax=uncultured bacterium (gcode 4) RepID=K2FXT1_9BACT rbh
Uncharacterized protein {ECO:0000313|EMBL:EKE26697.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
translation initiation factor IF-2
AR1-0.1_scaffold_40_9

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10476..10964
DNA (489bp) protein (163aa)
RNA-binding protein n=1 Tax=uncultured bacterium (gcode 4) RepID=K2FTR9_9BACT
RNA-binding protein {ECO:0000313|EMBL:EKE26323.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
AR1-0.1_scaffold_40_10

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11051..12184
DNA (1134bp) protein (378aa)
Uncharacterized protein n=1 Tax=uncultured bacterium (gcode 4) RepID=K2FWQ6_9BACT rbh
Uncharacterized protein {ECO:0000313|EMBL:EKE26322.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
AR1-0.1_scaffold_40_11
unknown

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12198..12632
DNA (435bp) protein (145aa)

This feature has no annotations

AR1-0.1_scaffold_40_12

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12661..13002
DNA (342bp) protein (114aa)
Uncharacterized protein n=1 Tax=uncultured bacterium (gcode 4) RepID=K2AYK2_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EKD66826.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
AR1-0.1_scaffold_40_13

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13008..13358
DNA (351bp) protein (117aa)
Uncharacterized protein n=1 Tax=uncultured bacterium (gcode 4) RepID=K2FVE9_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EKE26943.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
AR1-0.1_scaffold_40_14

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comp(13387..13812)
DNA (426bp) protein (142aa)
Uncharacterized protein n=1 Tax=uncultured bacterium (gcode 4) RepID=K2FVQ1_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EKE27028.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
AR1-0.1_scaffold_40_15

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comp(13829..14719)
DNA (891bp) protein (297aa)
Uncharacterized protein n=1 Tax=uncultured bacterium (gcode 4) RepID=K2GG53_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EKE29374.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
AR1-0.1_scaffold_40_16

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comp(14725..15717)
DNA (993bp) protein (331aa)
transmembrane_regions 79..98 id=34542 bin=ACD2 species=ACD2 genus=ACD2 taxon_order=ACD2 taxon_class=ACD2 phylum=BD1-5 tax=ACD2 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5
Uncharacterized protein {ECO:0000313|EMBL:EKE29316.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
AR1-0.1_scaffold_40_17

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comp(15727..18582)
DNA (2856bp) protein (952aa)
Uncharacterized protein n=1 Tax=uncultured bacterium (gcode 4) RepID=K2H0J2_9BACT rbh
Uncharacterized protein {ECO:0000313|EMBL:EKE29315.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
hypothetical protein
AR1-0.1_scaffold_40_trna_1
unknown

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18810..18882
DNA (73bp)
transferRNA Lys
AR1-0.1_scaffold_40_18
Marinithermus hydrothermalis, Marinithermus, Thermales, Deinococci, Deinococcus-Thermus, Bacteria

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19012..19359
DNA (348bp) protein (116aa)
Thioredoxin n=1 Tax=Marinithermus hydrothermalis (strain DSM 14884 / JCM 11576 / T1) RepID=F2NKX6_MARHT
thioredoxin
Thioredoxin {ECO:0000256|PIRNR:PIRNR000077}; TaxID=869210 species="Bacteria; Deinococcus-Thermus; Deinococci; Thermales; Thermaceae; Marinithermus.;" source="Marinithermus hydrothermalis (strain DSM 14884 / JCM 11576 / T1).;"
AR1-0.1_scaffold_40_19
unknown

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comp(19400..19705)
DNA (306bp) protein (102aa)

This feature has no annotations

AR1-0.1_scaffold_40_20
CG_Elusi_05, Elusimicrobia, Bacteria

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comp(19718..20323)
DNA (606bp) protein (202aa)
HAD family hydrolase; K07025 putative hydrolase of the HAD superfamily id=131430 bin=ACD7 species=ACD7 genus=ACD7 taxon_order=ACD7 taxon_class=ACD7 phylum=OD1-i tax=ACD7 organism_group=OD1-i organism_desc=OD1-i
HAD-superfamily hydrolase
Tax=CG_Elusi_05
AR1-0.1_scaffold_40_21

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comp(20326..20796)
DNA (471bp) protein (157aa)
hypothetical protein id=69376 bin=ACD49 species=ACD49 genus=ACD49 taxon_order=ACD49 taxon_class=ACD49 phylum=BD1-5 tax=ACD49 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5
Uncharacterized protein {ECO:0000313|EMBL:EKD66462.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
AR1-0.1_scaffold_40_22

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comp(20920..21372)
DNA (453bp) protein (151aa)
seg 73..84 id=50502 bin=ACD3 species=ACD3 genus=ACD3 taxon_order=ACD3 taxon_class=ACD3 phylum=BD1-5 tax=ACD3 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5
Uncharacterized protein {ECO:0000313|EMBL:EKE28744.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
AR1-0.1_scaffold_40_23

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21524..22690
DNA (1167bp) protein (389aa)
Malic enzyme (EC:1.1.1.38)
Uncharacterized protein n=1 Tax=uncultured bacterium (gcode 4) RepID=K2FVV6_9BACT rbh
Uncharacterized protein {ECO:0000313|EMBL:EKE27078.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
AR1-0.1_scaffold_40_24

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comp(22713..23462)
DNA (750bp) protein (250aa)
Uncharacterized protein n=1 Tax=uncultured bacterium (gcode 4) RepID=K2FXT9_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EKE26707.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
AR1-0.1_scaffold_40_25
Plasmodium falciparum, Plasmodium, Haemosporida, Aconoidasida, Apicomplexa, Eukaryota

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comp(23426..24364)
DNA (939bp) protein (313aa)
Putative uncharacterized protein DDB_G0282133 n=1 Tax=Dictyostelium discoideum RepID=Y8359_DICDI
Uncharacterized protein {ECO:0000313|EMBL:EUT80046.1}; TaxID=478859 species="Eukaryota; Alveolata; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania).;" source="Plasmodium falciparum Santa Lucia.;"
hypothetical protein
AR1-0.1_scaffold_40_26
ACD78, Gracilibacteria, Bacteria

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comp(24477..25139)
DNA (663bp) protein (221aa)
seg 14..29 id=124093 bin=ACD78 species=ACD78 genus=ACD78 taxon_order=ACD78 taxon_class=ACD78 phylum=BD1-5 tax=ACD78 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5
Tax=ACD78
AR1-0.1_scaffold_40_27

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25308..27881
DNA (2574bp) protein (858aa)
DNA topoisomerase (ATP-hydrolyzing) {ECO:0000256|SAAS:SAAS00075954}; EC=5.99.1.3 {ECO:0000256|SAAS:SAAS00075954};; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
gyrA; DNA gyrase (subunit A) (EC:5.99.1.3)
DNA gyrase, A subunit n=1 Tax=uncultured bacterium (gcode 4) RepID=K2GGF4_9BACT rbh
AR1-0.1_scaffold_40_28
Candidatus Saccharimonas aalborgensis, Candidatus Saccharimonas, Candidatus Saccharibacteria, Bacteria

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28111..29478
DNA (1368bp) protein (456aa)
putative UDP-N-acetylglucosamine 2-epimerase (EC:5.1.3.14) rbh
Putative UDP-N-acetylglucosamine 2-epimerase {ECO:0000313|EMBL:AGL62221.1}; EC=5.1.3.14 {ECO:0000313|EMBL:AGL62221.1};; TaxID=1332188 species="Bacteria; Candidatus Saccharibacteria; Candidatus Saccharimonas.;" source="Candidatus Saccharimonas aalborgensis.;"
Putative UDP-N-acetylglucosamine 2-epimerase n=1 Tax=Candidatus Saccharimonas aalborgensis RepID=R4PYD9_9BACT rbh
AR1-0.1_scaffold_40_29

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30135..31880
DNA (1746bp) protein (582aa)
Putative uncharacterized protein n=1 Tax=Anaerofustis stercorihominis DSM 17244 RepID=B1C6Q9_9FIRM id=49610 bin=ACD3 species=Anaerofustis stercorihominis genus=Anaerofustis taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=ACD3 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5 rbh
Uncharacterized protein {ECO:0000313|EMBL:EKE28716.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
Lipid A export ATP-binding/permease protein MsbA
Displaying items 1-30 of 35 in total

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