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RifSed_csp2_19ft_3_scaffold_25398

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RifSed_csp2_19ft_3_scaffold_25398_1
RBG_16_RIF_OP11_02_41_13_curated, RIF-OP11-2, Microgenomates, Bacteria

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1..645
DNA (645bp) protein (215aa)
transmembrane_regions 338..360 id=74713 bin=ACD52 species=ACD52 genus=ACD52 taxon_order=ACD52 taxon_class=ACD52 phylum=OP11 tax=ACD52 organism_group=OP11 (Microgenomates) organism_desc=OP11
Tax=RBG_16_RIF_OP11_02_41_13_curated
RifSed_csp2_19ft_3_scaffold_25398_2
RBG_16_RIF_OP11_02_41_13_curated, RIF-OP11-2, Microgenomates, Bacteria

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700..1263
DNA (564bp) protein (188aa)
sortase family protein n=1 Tax=candidate division TM7 single-cell isolate TM7a RepID=UPI000174396F id=74716 bin=ACD52 species=candidate division TM7 single-cell isolate TM7a genus=unknown taxon_order=unknown taxon_class=unknown phylum=Candidatus Saccharibacteria tax=ACD52 organism_group=OP11 (Microgenomates) organism_desc=OP11 rbh
sortase family protein
Tax=RBG_16_RIF_OP11_02_41_13_curated
RifSed_csp2_19ft_3_scaffold_25398_3
RBG_16_RIF_OP11_02_41_13_curated, RIF-OP11-2, Microgenomates, Bacteria

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comp(1260..1412)
DNA (153bp) protein (51aa)
hypothetical protein id=74708 bin=ACD52 species=ACD52 genus=ACD52 taxon_order=ACD52 taxon_class=ACD52 phylum=OP11 tax=ACD52 organism_group=OP11 (Microgenomates) organism_desc=OP11
Tax=RBG_16_RIF_OP11_02_41_13_curated
RifSed_csp2_19ft_3_scaffold_25398_4

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1471..2052
DNA (582bp) protein (194aa)
transmembrane_regions 9..31 id=74710 bin=ACD52 species=ACD52 genus=ACD52 taxon_order=ACD52 taxon_class=ACD52 phylum=OP11 tax=ACD52 organism_group=OP11 (Microgenomates) organism_desc=OP11 rbh
Uncharacterized protein {ECO:0000313|EMBL:EKD62895.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
RifSed_csp2_19ft_3_scaffold_25398_5

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2127..2531
DNA (405bp) protein (135aa)
RNA-binding protein n=1 Tax=Streptomyces hygroscopicus ATCC 53653 RepID=UPI0001B4E50B id=74717 bin=ACD52 species=Streptomyces himastatinicus genus=Streptomyces taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=ACD52 organism_group=OP11 (Microgenomates) organism_desc=OP11
RNA-binding protein {ECO:0000313|EMBL:EKD62896.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
rbp; RNA-binding protein
RifSed_csp2_19ft_3_scaffold_25398_6
RBG_16_RIF_OP11_02_41_13_curated, RIF-OP11-2, Microgenomates, Bacteria

Not on your lists

comp(2532..2786)
DNA (255bp) protein (85aa)
hypothetical protein id=74711 bin=ACD52 species=ACD52 genus=ACD52 taxon_order=ACD52 taxon_class=ACD52 phylum=OP11 tax=ACD52 organism_group=OP11 (Microgenomates) organism_desc=OP11
Tax=RBG_16_RIF_OP11_02_41_13_curated
RifSed_csp2_19ft_3_scaffold_25398_7
RBG_16_RIF_OP11_02_41_13_curated, RIF-OP11-2, Microgenomates, Bacteria

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comp(2851..3780)
DNA (930bp) protein (310aa)
C-terminal effector domain of the bipartite response regulators 192..299 id=74715 bin=ACD52 species=ACD52 genus=ACD52 taxon_order=ACD52 taxon_class=ACD52 phylum=OP11 tax=ACD52 organism_group=OP11 (Microgenomates) organism_desc=OP11 rbh
Tax=RBG_16_RIF_OP11_02_41_13_curated
RifSed_csp2_19ft_3_scaffold_25398_8
RBG_16_RIF_OP11_02_41_13_curated, RIF-OP11-2, Microgenomates, Bacteria

Not on your lists

3827..4351
DNA (525bp) protein (175aa)
seg 356..370 id=74712 bin=ACD52 species=ACD52 genus=ACD52 taxon_order=ACD52 taxon_class=ACD52 phylum=OP11 tax=ACD52 organism_group=OP11 (Microgenomates) organism_desc=OP11 rbh
Tax=RBG_16_RIF_OP11_02_41_13_curated
Displaying 8 items

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