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RifSed_csp2_19ft_3_scaffold_4946

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Displaying 30 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RifSed_csp2_19ft_3_scaffold_4946_1
RBG_16_RIF_OP11_02_41_13_curated, RIF-OP11-2, Microgenomates, Bacteria

Not on your lists

298..1464
DNA (1167bp) protein (389aa)
pdi:BDI_1161 ATP-dependent RNA helicase DeaD; K11927 ATP-dependent RNA helicase RhlE [EC:3.6.4.13] id=75767 bin=ACD52 species=ACD52 genus=ACD52 taxon_order=ACD52 taxon_class=ACD52 phylum=OP11 tax=ACD52 organism_group=OP11 (Microgenomates) organism_desc=OP11 rbh
ATP-dependent RNA helicase RhlE
Tax=RBG_16_RIF_OP11_02_41_13_curated
RifSed_csp2_19ft_3_scaffold_4946_2
RBG_16_RIF_OP11_02_41_13_curated, RIF-OP11-2, Microgenomates, Bacteria

Not on your lists

comp(1457..2032)
DNA (576bp) protein (192aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2A1N2_9BACT rbh
hypothetical protein
Tax=RBG_16_RIF_OP11_02_41_13_curated
RifSed_csp2_19ft_3_scaffold_4946_3
RBG_16_RIF_OP11_02_41_13_curated, RIF-OP11-2, Microgenomates, Bacteria

Not on your lists

2244..2513
DNA (270bp) protein (90aa)
Tax=RBG_16_RIF_OP11_02_41_13_curated
RifSed_csp2_19ft_3_scaffold_4946_4
RBG_16_RIF_OP11_02_41_13_curated, RIF-OP11-2, Microgenomates, Bacteria

Not on your lists

2522..3031
DNA (510bp) protein (170aa)
Putative uncharacterized protein n=1 Tax=Sulfuricurvum kujiense DSM 16994 RepID=E4U1Q8_SULKY id=75756 bin=ACD52 species=Sulfuricurvum kujiense genus=Sulfuricurvum taxon_order=Campylobacterales taxon_class=Epsilonproteobacteria phylum=Proteobacteria tax=ACD52 organism_group=OP11 (Microgenomates) organism_desc=OP11 rbh
hypothetical protein
Tax=RBG_16_RIF_OP11_02_41_13_curated
RifSed_csp2_19ft_3_scaffold_4946_5

Not on your lists

3461..3820
DNA (360bp) protein (120aa)
hypothetical protein id=75757 bin=ACD52 species=ACD52 genus=ACD52 taxon_order=ACD52 taxon_class=ACD52 phylum=OP11 tax=ACD52 organism_group=OP11 (Microgenomates) organism_desc=OP11
Uncharacterized protein {ECO:0000313|EMBL:EKD61982.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
RifSed_csp2_19ft_3_scaffold_4946_6
RBG_16_RIF_OP11_02_41_13_curated, RIF-OP11-2, Microgenomates, Bacteria

Not on your lists

3871..4251
DNA (381bp) protein (127aa)
Endoribonuclease L-PSP family protein n=1 Tax=Pedobacter sp. BAL39 RepID=A6EB10_9SPHI id=75758 bin=ACD52 species=Pedobacter sp. BAL39 genus=Pedobacter taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=ACD52 organism_group=OP11 (Microgenomates) organism_desc=OP11
endoribonuclease L-PSP
Tax=RBG_16_RIF_OP11_02_41_13_curated
RifSed_csp2_19ft_3_scaffold_4946_7
RBG_16_RIF_OP11_02_41_13_curated, RIF-OP11-2, Microgenomates, Bacteria

Not on your lists

4255..4761
DNA (507bp) protein (169aa)
NUDIX hydrolase id=75766 bin=ACD52 species=ACD52 genus=ACD52 taxon_order=ACD52 taxon_class=ACD52 phylum=OP11 tax=ACD52 organism_group=OP11 (Microgenomates) organism_desc=OP11 rbh
hypothetical protein
Tax=RBG_16_RIF_OP11_02_41_13_curated
RifSed_csp2_19ft_3_scaffold_4946_8
RBG_16_RIF_OP11_02_41_13_curated, RIF-OP11-2, Microgenomates, Bacteria

Not on your lists

4798..5079
DNA (282bp) protein (94aa)
Putative uncharacterized protein n=1 Tax=delta proteobacterium MLMS-1 RepID=Q1NNK3_9DELT id=75760 bin=ACD52 species=delta proteobacterium MLMS-1 genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=ACD52 organism_group=OP11 (Microgenomates) organism_desc=OP11
hypothetical protein
Tax=RBG_16_RIF_OP11_02_41_13_curated
RifSed_csp2_19ft_3_scaffold_4946_9
RBG_16_RIF_OP11_02_41_13_curated, RIF-OP11-2, Microgenomates, Bacteria

Not on your lists

5057..5290
DNA (234bp) protein (78aa)
Putative uncharacterized protein n=1 Tax=uncultured Desulfobacterium sp. RepID=E1YE58_9DELT id=75754 bin=ACD52 species=uncultured Desulfobacterium sp. genus=Desulfobacterium taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=ACD52 organism_group=OP11 (Microgenomates) organism_desc=OP11
helix-turn-helix protein CopG
Tax=RBG_16_RIF_OP11_02_41_13_curated
RifSed_csp2_19ft_3_scaffold_4946_10
RBG_16_RIF_OP11_02_41_13_curated, RIF-OP11-2, Microgenomates, Bacteria

Not on your lists

5353..5976
DNA (624bp) protein (208aa)
peptidase, S51 family (EC:3.4.13.21)
Peptidase E n=1 Tax=Streptomyces himastatinicus ATCC 53653 RepID=D9WBK8_9ACTO id=75759 bin=ACD52 species=Streptomyces himastatinicus genus=Streptomyces taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=ACD52 organism_group=OP11 (Microgenomates) organism_desc=OP11 rbh
Tax=RBG_16_RIF_OP11_02_41_13_curated
RifSed_csp2_19ft_3_scaffold_4946_11
RBG_16_RIF_OP11_02_41_13_curated, RIF-OP11-2, Microgenomates, Bacteria

Not on your lists

comp(6034..7005)
DNA (972bp) protein (324aa)
aldo/keto reductase (EC:1.-.-.-)
rsi:Runsl_1646 aldo/keto reductase id=1244547 bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
Tax=RBG_16_RIF_OP11_02_41_13_curated
RifSed_csp2_19ft_3_scaffold_4946_12
RBG_16_RIF_OP11_02_41_13_curated, RIF-OP11-2, Microgenomates, Bacteria

Not on your lists

7312..7992
DNA (681bp) protein (227aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2C2E6_9BACT
hypothetical protein
Tax=RBG_16_RIF_OP11_02_41_13_curated
RifSed_csp2_19ft_3_scaffold_4946_13
RBG_16_RIF_OP11_02_41_13_curated, RIF-OP11-2, Microgenomates, Bacteria

Not on your lists

8030..8962
DNA (933bp) protein (311aa)
alcohol dehydrogenase related protein id=75782 bin=ACD52 species=ACD52 genus=ACD52 taxon_order=ACD52 taxon_class=ACD52 phylum=OP11 tax=ACD52 organism_group=OP11 (Microgenomates) organism_desc=OP11 rbh
aldo/keto reductase
Tax=RBG_16_RIF_OP11_02_41_13_curated
RifSed_csp2_19ft_3_scaffold_4946_14

Not on your lists

8913..9524
DNA (612bp) protein (204aa)
NUDIX hydrolase n=1 Tax=Cellulomonas fimi ATCC 484 RepID=F4H6V6_CELFA id=75775 bin=ACD52 species=Cellulomonas fimi genus=Cellulomonas taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=ACD52 organism_group=OP11 (Microgenomates) organism_desc=OP11 rbh
NUDIX hydrolase {ECO:0000313|EMBL:EKD62044.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
DNA mismatch repair protein MutT
RifSed_csp2_19ft_3_scaffold_4946_15

Not on your lists

9526..10290
DNA (765bp) protein (255aa)
inositol-phosphate phosphatase (EC:3.1.3.25); K01092 myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] id=75771 bin=ACD52 species=ACD52 genus=ACD52 taxon_order=ACD52 taxon_class=ACD52 phylum=OP11 tax=ACD52 organism_group=OP11 (Microgenomates) organism_desc=OP11 rbh
Uncharacterized protein {ECO:0000313|EMBL:EKD62045.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
histidinol phosphate phosphatase
RifSed_csp2_19ft_3_scaffold_4946_16
RBG_16_RIF_OP11_02_41_13_curated, RIF-OP11-2, Microgenomates, Bacteria

Not on your lists

10299..10418
DNA (120bp) protein (40aa)
hypothetical protein id=75778 bin=ACD52 species=ACD52 genus=ACD52 taxon_order=ACD52 taxon_class=ACD52 phylum=OP11 tax=ACD52 organism_group=OP11 (Microgenomates) organism_desc=OP11
Tax=RBG_16_RIF_OP11_02_41_13_curated
RifSed_csp2_19ft_3_scaffold_4946_17
RBG_16_RIF_OP11_02_41_13_curated, RIF-OP11-2, Microgenomates, Bacteria

Not on your lists

comp(10465..11043)
DNA (579bp) protein (193aa)
hypothetical protein; K07090 id=75774 bin=ACD52 species=ACD52 genus=ACD52 taxon_order=ACD52 taxon_class=ACD52 phylum=OP11 tax=ACD52 organism_group=OP11 (Microgenomates) organism_desc=OP11 rbh
hypothetical protein
Tax=RBG_16_RIF_OP11_02_41_13_curated
RifSed_csp2_19ft_3_scaffold_4946_18
RBG_16_RIF_OP11_02_41_13_curated, RIF-OP11-2, Microgenomates, Bacteria

Not on your lists

11102..11710
DNA (609bp) protein (203aa)
transmembrane_regions 60..82 id=85010 bin=ACD57 species=ACD57 genus=ACD57 taxon_order=ACD57 taxon_class=ACD57 phylum=OP11 tax=ACD57 organism_group=OP11 (Microgenomates) organism_desc=OP11
Tax=RBG_16_RIF_OP11_02_41_13_curated
RifSed_csp2_19ft_3_scaffold_4946_19
RBG_16_RIF_OP11_02_41_13_curated, RIF-OP11-2, Microgenomates, Bacteria

Not on your lists

11759..13579
DNA (1821bp) protein (607aa)
UniRef90_A5KT16 Small GTP-binding protein n=1 Tax=candidate division TM7 genomosp. GTL1 RepID=A5KT16_9BACT id=75773 bin=ACD52 species=ACD52 genus=ACD52 taxon_order=ACD52 taxon_class=ACD52 phylum=OP11 tax=ACD52 organism_group=OP11 (Microgenomates) organism_desc=OP11 rbh
hypothetical protein
Tax=RBG_16_RIF_OP11_02_41_13_curated
RifSed_csp2_19ft_3_scaffold_4946_20
unknown

Not on your lists

13652..13813
DNA (162bp) protein (54aa)

This feature has no annotations

RifSed_csp2_19ft_3_scaffold_4946_21
RBG_16_RIF_OP11_02_41_13_curated, RIF-OP11-2, Microgenomates, Bacteria

Not on your lists

13879..13983
DNA (105bp) protein (35aa)
hypothetical protein id=75783 bin=ACD52 species=ACD52 genus=ACD52 taxon_order=ACD52 taxon_class=ACD52 phylum=OP11 tax=ACD52 organism_group=OP11 (Microgenomates) organism_desc=OP11
Tax=RBG_16_RIF_OP11_02_41_13_curated
RifSed_csp2_19ft_3_scaffold_4946_22
RBG_16_RIF_OP11_02_41_13_curated, RIF-OP11-2, Microgenomates, Bacteria

Not on your lists

comp(14290..14865)
DNA (576bp) protein (192aa)
Putative adenylyl cyclase CyaB n=1 Tax=candidate division TM7 genomosp. GTL1 RepID=A5KSE0_9BACT id=75776 bin=ACD52 species=candidate division TM7 genomosp. GTL1 genus=unknown taxon_order=unknown taxon_class=unknown phylum=Candidatus Saccharibacteria tax=ACD52 organism_group=OP11 (Microgenomates) organism_desc=OP11 rbh
adenylyl cyclase CyaB
Tax=RBG_16_RIF_OP11_02_41_13_curated
RifSed_csp2_19ft_3_scaffold_4946_23
RBG_16_RIF_OP11_02_41_13_curated, RIF-OP11-2, Microgenomates, Bacteria

Not on your lists

comp(15029..15451)
DNA (423bp) protein (141aa)
seg 117..131 id=75779 bin=ACD52 species=ACD52 genus=ACD52 taxon_order=ACD52 taxon_class=ACD52 phylum=OP11 tax=ACD52 organism_group=OP11 (Microgenomates) organism_desc=OP11
Tax=RBG_16_RIF_OP11_02_41_13_curated
RifSed_csp2_19ft_3_scaffold_4946_24

Not on your lists

15574..16404
DNA (831bp) protein (277aa)
Phage integrase family protein n=1 Tax=uncultured bacterium RepID=K2B057_9BACT rbh
Phage integrase family protein {ECO:0000313|EMBL:EKD62038.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
Phage integrase family protein
RifSed_csp2_19ft_3_scaffold_4946_25
RBG_16_RIF_OP11_02_41_13_curated, RIF-OP11-2, Microgenomates, Bacteria

Not on your lists

comp(16523..16972)
DNA (450bp) protein (150aa)
seg 129..148 id=75780 bin=ACD52 species=ACD52 genus=ACD52 taxon_order=ACD52 taxon_class=ACD52 phylum=OP11 tax=ACD52 organism_group=OP11 (Microgenomates) organism_desc=OP11
Tax=RBG_16_RIF_OP11_02_41_13_curated
RifSed_csp2_19ft_3_scaffold_4946_26
RBG_16_RIF_OP11_02_41_13_curated, RIF-OP11-2, Microgenomates, Bacteria

Not on your lists

comp(17049..18050)
DNA (1002bp) protein (334aa)
integral membrane sensor signal transduction histidine kinase id=75770 bin=ACD52 species=ACD52 genus=ACD52 taxon_order=ACD52 taxon_class=ACD52 phylum=OP11 tax=ACD52 organism_group=OP11 (Microgenomates) organism_desc=OP11 rbh
integral membrane sensor signal transduction histidine kinase
Tax=RBG_16_RIF_OP11_02_41_13_curated
RifSed_csp2_19ft_3_scaffold_4946_27
RBG_16_RIF_OP11_02_41_13_curated, RIF-OP11-2, Microgenomates, Bacteria

Not on your lists

comp(18050..18700)
DNA (651bp) protein (217aa)
Two component transcriptional regulator, winged helix family n=1 Tax=candidate division TM7 genomosp. GTL1 RepID=A5KSR3_9BACT id=75769 bin=ACD52 species=candidate division TM7 genomosp. GTL1 genus=unknown taxon_order=unknown taxon_class=unknown phylum=Candidatus Saccharibacteria tax=ACD52 organism_group=OP11 (Microgenomates) organism_desc=OP11 rbh
two component transcriptional regulator, winged helix family protein
Tax=RBG_16_RIF_OP11_02_41_13_curated
RifSed_csp2_19ft_3_scaffold_4946_28
RBG_16_RIF_OP11_02_41_13_curated, RIF-OP11-2, Microgenomates, Bacteria

Not on your lists

comp(18725..19081)
DNA (357bp) protein (119aa)
hypothetical protein id=75781 bin=ACD52 species=ACD52 genus=ACD52 taxon_order=ACD52 taxon_class=ACD52 phylum=OP11 tax=ACD52 organism_group=OP11 (Microgenomates) organism_desc=OP11
Tax=RBG_16_RIF_OP11_02_41_13_curated
RifSed_csp2_19ft_3_scaffold_4946_29
RBG_16_RIF_OP11_02_41_13_curated, RIF-OP11-2, Microgenomates, Bacteria

Not on your lists

comp(19217..19927)
DNA (711bp) protein (237aa)
hypothetical protein id=85786 bin=ACD57 species=ACD57 genus=ACD57 taxon_order=ACD57 taxon_class=ACD57 phylum=OP11 tax=ACD57 organism_group=OP11 (Microgenomates) organism_desc=OP11
Tax=RBG_16_RIF_OP11_02_41_13_curated
RifSed_csp2_19ft_3_scaffold_4946_30
RBG_16_RIF_OP11_02_41_13_curated, RIF-OP11-2, Microgenomates, Bacteria

Not on your lists

comp(19933..21219)
DNA (1287bp) protein (429aa)
dtu:Dtur_1273 gltX; glutamyl-tRNA synthetase; K09698 nondiscriminating glutamyl-tRNA synthetase [EC:6.1.1.24] id=75233 bin=ACD52 species=ACD52 genus=ACD52 taxon_order=ACD52 taxon_class=ACD52 phylum=OP11 tax=ACD52 organism_group=OP11 (Microgenomates) organism_desc=OP11 rbh
glnS; glutamyl-tRNA synthetase (EC:6.1.1.17)
Tax=RBG_16_RIF_OP11_02_41_13_curated
Displaying 30 items

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