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RifSed_csp2_19ft_3_scaffold_22186

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RifSed_csp2_19ft_3_scaffold_22186_1
RBG_16_RIF_OP11_02_41_13_curated, RIF-OP11-2, Microgenomates, Bacteria

Not on your lists


3..1703
DNA (1701bp) protein (567aa)
tye:THEYE_A0884 valS; valyl-tRNA synthetase (EC:6.1.1.9); K01873 valyl-tRNA synthetase [EC:6.1.1.9] id=75042 bin=ACD52 species=ACD52 genus=ACD52 taxon_order=ACD52 taxon_class=ACD52 phylum=OP11 tax=ACD52 organism_group=OP11 (Microgenomates) organism_desc=OP11 rbh
hypothetical protein
Tax=RBG_16_RIF_OP11_02_41_13_curated
RifSed_csp2_19ft_3_scaffold_22186_2
RBG_16_RIF_OP11_02_41_13_curated, RIF-OP11-2, Microgenomates, Bacteria

Not on your lists

comp(1700..2002)
DNA (303bp) protein (101aa)
transmembrane_regions 74..96 id=75198 bin=ACD52 species=ACD52 genus=ACD52 taxon_order=ACD52 taxon_class=ACD52 phylum=OP11 tax=ACD52 organism_group=OP11 (Microgenomates) organism_desc=OP11
Tax=RBG_16_RIF_OP11_02_41_13_curated
RifSed_csp2_19ft_3_scaffold_22186_3
RBG_16_RIF_OP11_02_41_13_curated, RIF-OP11-2, Microgenomates, Bacteria

Not on your lists

comp(2004..2813)
DNA (810bp) protein (270aa)
coiled-coil 3..24 id=75035 bin=ACD52 species=ACD52 genus=ACD52 taxon_order=ACD52 taxon_class=ACD52 phylum=OP11 tax=ACD52 organism_group=OP11 (Microgenomates) organism_desc=OP11 rbh
Tax=RBG_16_RIF_OP11_02_41_13_curated
RifSed_csp2_19ft_3_scaffold_22186_4
RBG_16_RIF_OP11_02_41_13_curated, RIF-OP11-2, Microgenomates, Bacteria

Not on your lists


comp(2883..3587)
DNA (705bp) protein (235aa)
50S ribosomal protein L25/general stress protein Ctc; K02897 large subunit ribosomal protein L25 id=75041 bin=ACD52 species=ACD52 genus=ACD52 taxon_order=ACD52 taxon_class=ACD52 phylum=OP11 tax=ACD52 organism_group=OP11 (Microgenomates) organism_desc=OP11 rbh
50S ribosomal protein L25
Tax=RBG_16_RIF_OP11_02_41_13_curated
RifSed_csp2_19ft_3_scaffold_22186_5
RBG_16_RIF_OP11_02_41_13_curated, RIF-OP11-2, Microgenomates, Bacteria

Not on your lists

comp(3591..5942)
DNA (2352bp) protein (784aa)
transmembrane_regions 46..68 id=75036 bin=ACD52 species=ACD52 genus=ACD52 taxon_order=ACD52 taxon_class=ACD52 phylum=OP11 tax=ACD52 organism_group=OP11 (Microgenomates) organism_desc=OP11 rbh
hypothetical protein
Tax=RBG_16_RIF_OP11_02_41_13_curated
RifSed_csp2_19ft_3_scaffold_22186_6
RBG_16_RIF_OP11_02_41_13_curated, RIF-OP11-2, Microgenomates, Bacteria

Not on your lists

comp(6040..6471)
DNA (432bp) protein (144aa)
rnhA; ribonuclease HI (EC:3.1.26.4); K03469 ribonuclease HI [EC:3.1.26.4] id=75040 bin=ACD52 species=ACD52 genus=ACD52 taxon_order=ACD52 taxon_class=ACD52 phylum=OP11 tax=ACD52 organism_group=OP11 (Microgenomates) organism_desc=OP11
rnhA; ribonuclease HI (EC:3.1.26.4)
Tax=RBG_16_RIF_OP11_02_41_13_curated
RifSed_csp2_19ft_3_scaffold_22186_7
RBG_16_RIF_OP11_02_41_13_curated, RIF-OP11-2, Microgenomates, Bacteria

Not on your lists

comp(6479..6934)
DNA (456bp) protein (152aa)
single-stranded nucleic acid binding R3H domain-containing protein; K06346 spoIIIJ-associated protein id=75039 bin=ACD52 species=ACD52 genus=ACD52 taxon_order=ACD52 taxon_class=ACD52 phylum=OP11 tax=ACD52 organism_group=OP11 (Microgenomates) organism_desc=OP11
single-stranded nucleic acid binding R3H domain-containing protein
Tax=RBG_16_RIF_OP11_02_41_13_curated
RifSed_csp2_19ft_3_scaffold_22186_8
RBG_16_RIF_OP11_02_41_13_curated, RIF-OP11-2, Microgenomates, Bacteria

Not on your lists

comp(6938..7750)
DNA (813bp) protein (271aa)
Stage III sporulation protein J n=1 Tax=Filifactor alocis ATCC 35896 RepID=D6GT11_9FIRM id=75038 bin=ACD52 species=Filifactor alocis genus=Filifactor taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=ACD52 organism_group=OP11 (Microgenomates) organism_desc=OP11 rbh
hypothetical protein
Tax=RBG_16_RIF_OP11_02_41_13_curated
RifSed_csp2_19ft_3_scaffold_22186_9
RBG_16_RIF_OP11_02_41_13_curated, RIF-OP11-2, Microgenomates, Bacteria

Not on your lists

comp(7975..8322)
DNA (348bp) protein (116aa)
rnpA; ribonuclease P; K03536 ribonuclease P protein component [EC:3.1.26.5] id=75037 bin=ACD52 species=ACD52 genus=ACD52 taxon_order=ACD52 taxon_class=ACD52 phylum=OP11 tax=ACD52 organism_group=OP11 (Microgenomates) organism_desc=OP11
rnpA; ribonuclease P protein component
Tax=RBG_16_RIF_OP11_02_41_13_curated
Displaying 9 items

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