ggKbase home page

RifSed_csp2_19ft_3_scaffold_49257

Search features with annotation key words

Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RifSed_csp2_19ft_3_scaffold_49257_1
RBG_16_RIF_OP11_02_41_13_curated, RIF-OP11-2, Microgenomates, Bacteria

Not on your lists

2..331
DNA (330bp) protein (110aa)
excinuclease ABC C subunit domain protein; K03703 excinuclease ABC subunit C id=7503 bin=ACD13 species=ACD13 genus=ACD13 taxon_order=ACD13 taxon_class=ACD13 phylum=OP11 tax=ACD13 organism_group=OP11 (Microgenomates) organism_desc=OP11
excinuclease ABC C subunit domain protein
Tax=RBG_16_RIF_OP11_02_41_13_curated
RifSed_csp2_19ft_3_scaffold_49257_2
RBG_16_RIF_OP11_02_41_13_curated, RIF-OP11-2, Microgenomates, Bacteria

Not on your lists

1092..1397
DNA (306bp) protein (102aa)
transmembrane_regions 21..43 id=27890 bin=ACD24 species=ACD24 genus=ACD24 taxon_order=ACD24 taxon_class=ACD24 phylum=WWE3 tax=ACD24 organism_group=WWE3 organism_desc=WWE3
Tax=RBG_16_RIF_OP11_02_41_13_curated
RifSed_csp2_19ft_3_scaffold_49257_3
RBG_16_RIF_OP11_02_41_13_curated, RIF-OP11-2, Microgenomates, Bacteria

Not on your lists

1385..1942
DNA (558bp) protein (186aa)
ABC-type dipeptide transport system, periplasmic component n=1 Tax=Thermaerobacter subterraneus DSM 13965 RepID=K6PZC1_9FIRM id=5087284 bin=GWF1_OP11_31_35_complete species=Thermaerobacter subterraneus genus=Thermaerobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF1_OP11_31_35_complete organism_group=OP11 (Microgenomates) organism_desc=Complete genome (was OP11_1)
Tax=RBG_16_RIF_OP11_02_41_13_curated
RifSed_csp2_19ft_3_scaffold_49257_4
RBG_16_RIF_OP11_02_41_13_curated, RIF-OP11-2, Microgenomates, Bacteria

Not on your lists

2152..3477
DNA (1326bp) protein (442aa)
seg 95..113 id=28269 bin=ACD24 species=ACD24 genus=ACD24 taxon_order=ACD24 taxon_class=ACD24 phylum=WWE3 tax=ACD24 organism_group=WWE3 organism_desc=WWE3
Tax=RBG_16_RIF_OP11_02_41_13_curated
RifSed_csp2_19ft_3_scaffold_49257_5
RBG_16_RIF_OP11_02_41_13_curated, RIF-OP11-2, Microgenomates, Bacteria

Not on your lists

3481..4266
DNA (786bp) protein (262aa)
Putative xylanase/chitin deacetylase n=1 Tax=Desulfomonile tiedjei (strain ATCC 49306 / DSM 6799 / DCB-1) RepID=I4CEV2_DESTA
putative xylanase/chitin deacetylase
Tax=RBG_16_RIF_OP11_02_41_13_curated
RifSed_csp2_19ft_3_scaffold_49257_6
RBG_16_RIF_OP11_02_41_13_curated, RIF-OP11-2, Microgenomates, Bacteria

Not on your lists

4263..5297
DNA (1035bp) protein (345aa)
glycosyl transferase family 2 id=28272 bin=ACD24 species=ACD24 genus=ACD24 taxon_order=ACD24 taxon_class=ACD24 phylum=WWE3 tax=ACD24 organism_group=WWE3 organism_desc=WWE3
cell wall biosynthesis glycosyltransferase
Tax=RBG_16_RIF_OP11_02_41_13_curated
RifSed_csp2_19ft_3_scaffold_49257_7
RBG_16_RIF_OP11_02_41_13_curated, RIF-OP11-2, Microgenomates, Bacteria

Not on your lists

5856..6260
DNA (405bp) protein (135aa)
Inactive glysosyl hydrolase family 18 n=1 Tax=Halothermothrix orenii (strain H 168 / OCM 544 / DSM 9562) RepID=B8D0H7_HALOH
Inactive glysosyl hydrolase family 18
Tax=RBG_16_RIF_OP11_02_41_13_curated
RifSed_csp2_19ft_3_scaffold_49257_8
RBG_16_RIF_OP11_02_41_13_curated, RIF-OP11-2, Microgenomates, Bacteria

Not on your lists

comp(6399..7544)
DNA (1146bp) protein (382aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2D0N5_9BACT
Tax=RBG_16_RIF_OP11_02_41_13_curated
RifSed_csp2_19ft_3_scaffold_49257_9
RBG_16_RIF_OP11_02_41_13_curated, RIF-OP11-2, Microgenomates, Bacteria

Not on your lists

7985..8404
DNA (420bp) protein (140aa)
Two component transcriptional regulator, winged helix family n=1 Tax=candidate division TM7 genomosp. GTL1 RepID=A5KSR3_9BACT id=6712 bin=ACD13 species=candidate division TM7 genomosp. GTL1 genus=unknown taxon_order=unknown taxon_class=unknown phylum=Candidatus Saccharibacteria tax=ACD13 organism_group=OP11 (Microgenomates) organism_desc=OP11
OmpR family response regulator
Tax=RBG_16_RIF_OP11_02_41_13_curated
Displaying 9 items

View Taxonomy