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RifSed_csp2_16ft_2_scaffold_19115

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RifSed_csp2_16ft_2_scaffold_19115_1
R_RIF_OP11_03_49_14, RIF-OP11-3, Microgenomates, Bacteria

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comp(3..713)
DNA (711bp) protein (237aa)
Type II secretion system F domain protein id=3405991 bin=GWC1_TM7_41_48 species=ACD58_39_12 genus=ACD58_39_12 taxon_order=ACD58_39_12 taxon_class=ACD58_39_12 phylum=ACD58 tax=GWC1_TM7_41_48 organism_group=TM7
type II secretion system protein
Tax=RIFCSPLOWO2_01_FULL_RIF_OP11_03_49_14_curated
RifSed_csp2_16ft_2_scaffold_19115_2
R_RIF_OP11_03_49_14, RIF-OP11-3, Microgenomates, Bacteria

Not on your lists

comp(750..2429)
DNA (1680bp) protein (560aa)
Type II secretion system protein E id=3787215 bin=GWB1_Berkelbacteria_38_5 species=ACD58_39_12 genus=ACD58_39_12 taxon_order=ACD58_39_12 taxon_class=ACD58_39_12 phylum=ACD58 tax=GWB1_Berkelbacteria_38_5 organism_group=ACD58 (Berkelbacteria)
type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB
Tax=RIFCSPLOWO2_01_FULL_RIF_OP11_03_49_14_curated
RifSed_csp2_16ft_2_scaffold_19115_3
R_RIF_OP11_03_49_14, RIF-OP11-3, Microgenomates, Bacteria

Not on your lists

comp(2471..2878)
DNA (408bp) protein (136aa)
Sigma-54 dependent DNA-binding response regulator n=1 Tax=Oceanicaulis alexandrii HTCC2633 RepID=A3UH55_9RHOB id=35664 bin=ACD30 species=Oceanicaulis sp. HTCC2633 genus=Oceanicaulis taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=ACD30 organism_group=OP11 (Microgenomates) organism_desc=OP11
hypothetical protein
Tax=RIFCSPLOWO2_01_FULL_RIF_OP11_03_49_14_curated
RifSed_csp2_16ft_2_scaffold_19115_4
R_RIF_OP11_03_49_14, RIF-OP11-3, Microgenomates, Bacteria

Not on your lists

comp(2912..3658)
DNA (747bp) protein (249aa)
undecaprenol kinase; K06153 undecaprenyl-diphosphatase [EC:3.6.1.27] id=15191760 bin=GWC1_OP11_49_16_COMPLETE species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Marinimicrobia tax=GWC1_OP11_49_16_COMPLETE organism_group=OP11 (Microgenomates)
UDP-diphosphatase
Tax=RIFCSPLOWO2_01_FULL_RIF_OP11_03_49_14_curated
RifSed_csp2_16ft_2_scaffold_19115_5
R_RIF_OP11_03_49_14, RIF-OP11-3, Microgenomates, Bacteria

Not on your lists

comp(3665..4363)
DNA (699bp) protein (233aa)
ygxB; putative integral inner membrane protein id=51853 bin=ACD40 species=ACD40 genus=ACD40 taxon_order=ACD40 taxon_class=ACD40 phylum=OP11 tax=ACD40 organism_group=OP11 (Microgenomates) organism_desc=OP11
hypothetical protein
Tax=RIFCSPLOWO2_01_FULL_RIF_OP11_03_49_14_curated
RifSed_csp2_16ft_2_scaffold_19115_6
R_RIF_OP11_03_49_14, RIF-OP11-3, Microgenomates, Bacteria

Not on your lists

comp(4863..5855)
DNA (993bp) protein (331aa)
protein of unknown function UPF0118 id=51855 bin=ACD40 species=ACD40 genus=ACD40 taxon_order=ACD40 taxon_class=ACD40 phylum=OP11 tax=ACD40 organism_group=OP11 (Microgenomates) organism_desc=OP11 rbh
hypothetical protein
Tax=RIFCSPLOWO2_01_FULL_RIF_OP11_03_49_14_curated
RifSed_csp2_16ft_2_scaffold_19115_7
R_RIF_OP11_03_49_14, RIF-OP11-3, Microgenomates, Bacteria

Not on your lists

comp(5907..6890)
DNA (984bp) protein (328aa)
tRNA dimethylallyltransferase n=1 Tax=uncultured bacterium RepID=K2EPW9_9BACT
tRNA dimethylallyltransferase
Tax=RIFCSPLOWO2_01_FULL_RIF_OP11_03_49_14_curated
RifSed_csp2_16ft_2_scaffold_19115_8
R_RIF_OP11_03_49_14, RIF-OP11-3, Microgenomates, Bacteria

Not on your lists

comp(6916..8070)
DNA (1155bp) protein (385aa)
RNA modification enzyme, MiaB family; K06168 bifunctional enzyme involved in thiolation and methylation of tRNA id=92523 bin=ACD61 species=ACD61 genus=ACD61 taxon_order=ACD61 taxon_class=ACD61 phylum=OP11 tax=ACD61 organism_group=OP11 (Microgenomates) organism_desc=OP11
hypothetical protein
Tax=RIFCSPLOWO2_01_FULL_RIF_OP11_03_49_14_curated
RifSed_csp2_16ft_2_scaffold_19115_9
R_RIF_OP11_03_49_14, RIF-OP11-3, Microgenomates, Bacteria

Not on your lists

comp(8073..8546)
DNA (474bp) protein (158aa)
Uncharacterized protein n=2 Tax=Saccharopolyspora erythraea RepID=A4FEX3_SACEN
hypothetical protein
Tax=RIFCSPLOWO2_01_FULL_RIF_OP11_03_49_14_curated
RifSed_csp2_16ft_2_scaffold_19115_10
R_RIF_OP11_03_49_14, RIF-OP11-3, Microgenomates, Bacteria

Not on your lists

comp(8579..8875)
DNA (297bp) protein (99aa)
hypothetical protein; K01992 ABC-2 type transport system permease protein id=15191768 bin=GWC1_OP11_49_16_COMPLETE species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC1_OP11_49_16_COMPLETE organism_group=OP11 (Microgenomates)
hypothetical protein
Tax=RIFCSPLOWO2_01_FULL_RIF_OP11_03_49_14_curated
Displaying 10 items

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