ggKbase home page

RifSed_csp2_16ft_2_scaffold_46171

Search features with annotation key words

Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RifSed_csp2_16ft_2_scaffold_46171_1
R_RIF_OP11_03_49_14, RIF-OP11-3, Microgenomates, Bacteria

Not on your lists

comp(1..177)
DNA (177bp) protein (59aa)
parB-like partition protein; K03497 chromosome partitioning protein, ParB family id=15191440 bin=GWC1_OP11_49_16_COMPLETE species=OP11_1 genus=OP11_1 taxon_order=OP11_1 taxon_class=OP11_1 phylum=OP11 tax=GWC1_OP11_49_16_COMPLETE organism_group=OP11 (Microgenomates)
Tax=RIFCSPLOWO2_01_FULL_RIF_OP11_03_49_14_curated
RifSed_csp2_16ft_2_scaffold_46171_2
R_RIF_OP11_03_49_14, RIF-OP11-3, Microgenomates, Bacteria

Not on your lists

comp(362..1540)
DNA (1179bp) protein (393aa)
Uncharacterized protein n=1 Tax=Pyrococcus sp. ST04 RepID=I3REA7_9EURY id=5087993 bin=OP11_3 species=Pyrococcus sp. ST04 genus=Pyrococcus taxon_order=Thermococcales taxon_class=Thermococci phylum=Euryarchaeota tax=OP11_3 organism_group=OP11 (Microgenomates) organism_desc=Complete genome
hypothetical protein
Tax=RIFCSPLOWO2_01_FULL_RIF_OP11_03_49_14_curated
RifSed_csp2_16ft_2_scaffold_46171_3
R_RIF_OP11_03_49_14, RIF-OP11-3, Microgenomates, Bacteria

Not on your lists


comp(1537..1881)
DNA (345bp) protein (115aa)
50S ribosomal protein L21; K02888 large subunit ribosomal protein L21 id=15191442 bin=GWC1_OP11_49_16_COMPLETE species=Selenomonas infelix genus=Selenomonas taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=GWC1_OP11_49_16_COMPLETE organism_group=OP11 (Microgenomates)
rplU; 50S ribosomal protein L21
Tax=RIFCSPLOWO2_01_FULL_RIF_OP11_03_49_14_curated
RifSed_csp2_16ft_2_scaffold_46171_4
R_RIF_OP11_03_49_14, RIF-OP11-3, Microgenomates, Bacteria

Not on your lists

comp(1975..3048)
DNA (1074bp) protein (358aa)
Rod shape-determining protein RodA n=1 Tax=uncultured bacterium RepID=K2CXU2_9BACT
mrdB; cell wall shape-determining protein
Tax=RIFCSPLOWO2_01_FULL_RIF_OP11_03_49_14_curated
RifSed_csp2_16ft_2_scaffold_46171_5
R_RIF_OP11_03_49_14, RIF-OP11-3, Microgenomates, Bacteria

Not on your lists

comp(3152..4753)
DNA (1602bp) protein (534aa)
Isoleucyl-tRNA synthetase n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C715_SPHTD id=5087359 bin=GWF1_OP11_31_35_complete species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWF1_OP11_31_35_complete organism_group=OP11 (Microgenomates) organism_desc=Complete genome (was OP11_1)
isoleucyl-tRNA synthetase
Tax=RIFCSPLOWO2_01_FULL_RIF_OP11_03_49_14_curated
RifSed_csp2_16ft_2_scaffold_46171_6
R_RIF_OP11_03_49_14, RIF-OP11-3, Microgenomates, Bacteria

Not on your lists

comp(4746..6083)
DNA (1338bp) protein (446aa)
Uncharacterized protein (Fragment) n=1 Tax=uncultured bacterium RepID=K1ZVW0_9BACT
isoleucyl-tRNA synthetase
Tax=RIFCSPLOWO2_01_FULL_RIF_OP11_03_49_14_curated
RifSed_csp2_16ft_2_scaffold_46171_7
R_RIF_OP11_03_49_14, RIF-OP11-3, Microgenomates, Bacteria

Not on your lists

comp(6175..7275)
DNA (1101bp) protein (367aa)
cell division protein FtsZ; K03531 cell division protein FtsZ id=15191448 bin=GWC1_OP11_49_16_COMPLETE species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC1_OP11_49_16_COMPLETE organism_group=OP11 (Microgenomates)
cell division protein FtsZ
Tax=RIFCSPLOWO2_01_FULL_RIF_OP11_03_49_14_curated
RifSed_csp2_16ft_2_scaffold_46171_8
R_RIF_OP11_03_49_14, RIF-OP11-3, Microgenomates, Bacteria

Not on your lists

comp(7591..8871)
DNA (1281bp) protein (427aa)
cell division protein FtsA; K03590 cell division protein FtsA id=15191449 bin=GWC1_OP11_49_16_COMPLETE species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC1_OP11_49_16_COMPLETE organism_group=OP11 (Microgenomates)
hypothetical protein
Tax=RIFCSPLOWO2_01_FULL_RIF_OP11_03_49_14_curated
RifSed_csp2_16ft_2_scaffold_46171_9
R_RIF_OP11_03_49_14, RIF-OP11-3, Microgenomates, Bacteria

Not on your lists

comp(8906..9724)
DNA (819bp) protein (273aa)
Tax=RIFCSPLOWO2_01_FULL_RIF_OP11_03_49_14_curated
RifSed_csp2_16ft_2_scaffold_46171_10
R_RIF_OP11_03_49_14, RIF-OP11-3, Microgenomates, Bacteria

Not on your lists

comp(9666..10808)
DNA (1143bp) protein (381aa)
UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase (EC:2.4.1.227); K02563 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] id=71860 bin=ACD50 species=ACD50 genus=ACD50 taxon_order=ACD50 taxon_class=ACD50 phylum=OP11 tax=ACD50 organism_group=OP11 (Microgenomates) organism_desc=OP11
UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-UDP N-acetylglucosamine transferase (EC:2.4.1.227)
Tax=RIFCSPLOWO2_01_FULL_RIF_OP11_03_49_14_curated
RifSed_csp2_16ft_2_scaffold_46171_11
R_RIF_OP11_03_49_14, RIF-OP11-3, Microgenomates, Bacteria

Not on your lists

comp(10795..11313)
DNA (519bp) protein (173aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2DUY1_9BACT
cell division-specific peptidoglycan biosynthesis regulator FtsW
Tax=RIFCSPLOWO2_01_FULL_RIF_OP11_03_49_14_curated
RifSed_csp2_16ft_2_scaffold_46171_12
R_RIF_OP11_03_49_14, RIF-OP11-3, Microgenomates, Bacteria

Not on your lists

comp(11368..11847)
DNA (480bp) protein (160aa)
stage V sporulation protein E; K03588 cell division protein FtsW id=5083949 bin=GWA2_OP11_43_14 species=GWA2_OP11 genus=GWA2_OP11 taxon_order=GWA2_OP11 taxon_class=GWA2_OP11 phylum=OP11 tax=GWA2_OP11_43_14 organism_group=OP11 (Microgenomates) organism_desc=GWA2_OP11_2
stage V sporulation protein E
Tax=RIFCSPLOWO2_01_FULL_RIF_OP11_03_49_14_curated
RifSed_csp2_16ft_2_scaffold_46171_13
R_RIF_OP11_03_49_14, RIF-OP11-3, Microgenomates, Bacteria

Not on your lists

comp(11907..12353)
DNA (447bp) protein (149aa)
hypothetical protein n=2 Tax=unclassified Euryarchaeota (miscellaneous) RepID=UPI0003792FD9
UDP-N-acetylmuramoylalanine--D-glutamate ligase
Tax=RIFCSPLOWO2_01_FULL_RIF_OP11_03_49_14_curated
Displaying 13 items

View Taxonomy