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RifSed_csp2_16ft_2_scaffold_92210

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RifSed_csp2_16ft_2_scaffold_92210_1
R_RIF_OP11_03_49_14, RIF-OP11-3, Microgenomates, Bacteria

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1..231
DNA (231bp) protein (77aa)
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase n=1 Tax=Clostridium botulinum D str. 1873 RepID=C5VT27_CLOBO id=42197 bin=ACD37 species=Clostridium botulinum genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=ACD37 organism_group=OP11 (Microgenomates) organism_desc=OP11
Tax=RIFCSPLOWO2_01_FULL_RIF_OP11_03_49_14_curated
RifSed_csp2_16ft_2_scaffold_92210_2
R_RIF_OP11_03_49_14, RIF-OP11-3, Microgenomates, Bacteria

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comp(228..464)
DNA (237bp) protein (79aa)
Tax=RIFCSPLOWO2_01_FULL_RIF_OP11_03_49_14_curated
RifSed_csp2_16ft_2_scaffold_92210_3
R_RIF_OP11_03_49_14, RIF-OP11-3, Microgenomates, Bacteria

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479..709
DNA (231bp) protein (77aa)
Tax=RIFCSPLOWO2_01_FULL_RIF_OP11_03_49_14_curated
RifSed_csp2_16ft_2_scaffold_92210_4
R_RIF_OP11_03_49_14, RIF-OP11-3, Microgenomates, Bacteria

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835..1911
DNA (1077bp) protein (359aa)
secretion protein HlyD; K13888 macrolide-specific efflux protein MacA id=15191320 bin=GWC1_OP11_49_16_COMPLETE species=RAAC19 genus=RAAC19 taxon_order=RAAC19 taxon_class=RAAC19 phylum=OP11 tax=GWC1_OP11_49_16_COMPLETE organism_group=OP11 (Microgenomates)
macA; macrolide-specific efflux protein, membrane fusion protein MacA
Tax=RIFCSPLOWO2_01_FULL_RIF_OP11_03_49_14_curated
RifSed_csp2_16ft_2_scaffold_92210_5
R_RIF_OP11_03_49_14, RIF-OP11-3, Microgenomates, Bacteria

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2029..2775
DNA (747bp) protein (249aa)
Cell division transporter, ATP-binding protein FtsE n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1CGI0_9CLOT id=5087735 bin=OP11_3 species=Clostridiaceae bacterium L21-TH-D2 genus=unknown taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=OP11_3 organism_group=OP11 (Microgenomates) organism_desc=Complete genome
ABC transporter-like protein
Tax=RIFCSPLOWO2_01_FULL_RIF_OP11_03_49_14_curated
RifSed_csp2_16ft_2_scaffold_92210_6
R_RIF_OP11_03_49_14, RIF-OP11-3, Microgenomates, Bacteria

Not on your lists

2772..3911
DNA (1140bp) protein (380aa)
protein of unknown function DUF214; K02004 id=68521 bin=ACD48 species=ACD48 genus=ACD48 taxon_order=ACD48 taxon_class=ACD48 phylum=OP11 tax=ACD48 organism_group=OP11 (Microgenomates) organism_desc=OP11
ABC-type antimicrobial peptide transport system, permease component
Tax=RIFCSPLOWO2_01_FULL_RIF_OP11_03_49_14_curated
RifSed_csp2_16ft_2_scaffold_92210_7
R_RIF_OP11_03_49_14, RIF-OP11-3, Microgenomates, Bacteria

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4096..4665
DNA (570bp) protein (190aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2D881_9BACT
hypothetical protein
Tax=RIFCSPLOWO2_01_FULL_RIF_OP11_03_49_14_curated
RifSed_csp2_16ft_2_scaffold_92210_8
R_RIF_OP11_03_49_14, RIF-OP11-3, Microgenomates, Bacteria

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4801..5559
DNA (759bp) protein (253aa)
ABC transporter; K01990 ABC-2 type transport system ATP-binding protein id=14627573 bin=bin7_NC10_sister species=TA06 genus=TA06 taxon_order=TA06 taxon_class=TA06 phylum=TA06 tax=bin7_NC10_sister organism_group=NC10
ABC-type multidrug transport system, ATPase component
Tax=RIFCSPLOWO2_01_FULL_RIF_OP11_03_49_14_curated
Displaying 8 items

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