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CG10_big_fil_rev_8_21_14_0.10_scaffold_539_c

Search features with annotation key words

Displaying items 1-30 of 55 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
CG10_big_fil_rev_8_21_14_0.10_scaffold_539_c_1
BJP_08E140C01_OD1_43_7, Parcubacteria, Bacteria

Not on your lists

2..859
DNA (858bp) protein (286aa)
Tax=BJP_08E140C01_OD1_43_7
CG10_big_fil_rev_8_21_14_0.10_scaffold_539_c_2

Not on your lists

comp(889..1929)
DNA (1041bp) protein (347aa)
Bifunctional phosphoglucose/phosphomannose isomerase (Pgi-pmi) {ECO:0000313|EMBL:AIF00813.1}; EC=5.3.1.8 {ECO:0000313|EMBL:AIF00813.1};; species="Archaea; Euryarchaeota; environmental samples.;" source="uncultured marine group II/III euryarchaeote KM3_139_C07.;"
Bifunctional phosphoglucose/phosphomannose isomerase bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
bifunctional phosphoglucose/phosphomannose isomerase
CG10_big_fil_rev_8_21_14_0.10_scaffold_539_c_3

Not on your lists

1993..2280
DNA (288bp) protein (96aa)
Uncharacterized protein {ECO:0000313|EMBL:KHO50113.1}; species="Archaea.;" source="archaeon GW2011_AR9.;"
Uncharacterized protein bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
hypothetical protein
CG10_big_fil_rev_8_21_14_0.10_scaffold_539_c_4

Not on your lists

comp(2289..3287)
DNA (999bp) protein (333aa)
Probable tRNA pseudouridine synthase B {ECO:0000256|HAMAP-Rule:MF_01081}; EC=5.4.99.25 {ECO:0000256|HAMAP-Rule:MF_01081};; tRNA pseudouridine(55) synthase {ECO:0000256|HAMAP-Rule:MF_01081}; tRNA pseudouridylate synthase {ECO:0000256|HAMAP-Rule:MF_01081}; tRNA-uridine isomerase {ECO:0000256|HAMAP-Rule:MF_01081}; species="Archaea.;" source="archaeon GW2011_AR15.;"
Probable tRNA pseudouridine synthase B bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
putative tRNA pseudouridine synthase B
CG10_big_fil_rev_8_21_14_0.10_scaffold_539_c_5
AR15, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(3304..3762)
DNA (459bp) protein (153aa)
Putative uncharacterized protein bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
hypothetical protein
Tax=AR15
CG10_big_fil_rev_8_21_14_0.10_scaffold_539_c_6

Not on your lists

3886..4518
DNA (633bp) protein (211aa)
NUDIX hydrolase bin=ACD58 species=ACD58 genus=ACD58 taxon_order=ACD58 taxon_class=ACD58 phylum=ACD58 tax=ACD58 organism_group=ACD58 (Berkelbacteria) organism_desc=ACD58
NUDIX hydrolase {ECO:0000313|EMBL:EKD56801.1}; species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
dimethyladenosine transferase
CG10_big_fil_rev_8_21_14_0.10_scaffold_539_c_7
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

comp(4598..5686)
DNA (1089bp) protein (363aa)
GTPase; K06944 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
small GTP-binding protein
Tax=CG_Woesearch_02
CG10_big_fil_rev_8_21_14_0.10_scaffold_539_c_8
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

5808..6863
DNA (1056bp) protein (352aa)
Putative uncharacterized protein PH1048 Tax=Pyrococcus horikoshii (strain ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3) RepID=O58749_PYRHO
hypothetical protein
Tax=AR11
CG10_big_fil_rev_8_21_14_0.10_scaffold_539_c_9
unknown

Not on your lists

comp(6860..7921)
DNA (1062bp) protein (354aa)

This feature has no annotations

CG10_big_fil_rev_8_21_14_0.10_scaffold_539_c_10
unknown

Not on your lists

comp(7921..8361)
DNA (441bp) protein (147aa)

This feature has no annotations

CG10_big_fil_rev_8_21_14_0.10_scaffold_539_c_11
unknown

Not on your lists

comp(8525..9703)
DNA (1179bp) protein (393aa)

This feature has no annotations

CG10_big_fil_rev_8_21_14_0.10_scaffold_539_c_12
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

Not on your lists

9811..10008
DNA (198bp) protein (66aa)
Tax=RBG_13_Woesearchaeota_36_6_curated
CG10_big_fil_rev_8_21_14_0.10_scaffold_539_c_13
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

10089..12029
DNA (1941bp) protein (647aa)
thrS; threonyl-tRNA synthetase (EC:6.1.1.3)
Threonine--tRNA ligase Tax=Carboxydothermus hydrogenoformans (strain Z-2901 / DSM 6008) RepID=SYT_CARHZ
Tax=CG_Woesearch_02
CG10_big_fil_rev_8_21_14_0.10_scaffold_539_c_14

Not on your lists

comp(12034..12240)
DNA (207bp) protein (69aa)
Marine sediment metagenome DNA, contig: S01H1_S27677 {ECO:0000313|EMBL:GAG41677.1}; Flags: Fragment;; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
CG10_big_fil_rev_8_21_14_0.10_scaffold_539_c_15
unknown

Not on your lists

12391..12534
DNA (144bp) protein (48aa)

This feature has no annotations

CG10_big_fil_rev_8_21_14_0.10_scaffold_539_c_16
unknown

Not on your lists

12536..12685
DNA (150bp) protein (50aa)

This feature has no annotations

CG10_big_fil_rev_8_21_14_0.10_scaffold_539_c_17
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

12771..13229
DNA (459bp) protein (153aa)
seg bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
hypothetical protein
Tax=AR11
CG10_big_fil_rev_8_21_14_0.10_scaffold_539_c_18
unknown

Not on your lists

13233..14219
DNA (987bp) protein (329aa)

This feature has no annotations

CG10_big_fil_rev_8_21_14_0.10_scaffold_539_c_19
CG_Woesearch_01, Woesearchaeota, Archaea

Not on your lists

14212..15669
DNA (1458bp) protein (486aa)
secretory protein kinase; K07332 archaeal flagellar protein FlaI bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Secretory protein kinase
Tax=CG_Woesearch_01
CG10_big_fil_rev_8_21_14_0.10_scaffold_539_c_20
CG_Woesearch_01, Woesearchaeota, Archaea

Not on your lists

15675..16484
DNA (810bp) protein (270aa)
hypothetical protein; K07333 archaeal flagellar protein FlaJ bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Type II secretion system protein
Tax=CG_Woesearch_01
CG10_big_fil_rev_8_21_14_0.10_scaffold_539_c_21

Not on your lists

16490..17533
DNA (1044bp) protein (348aa)
Uncharacterized protein {ECO:0000313|EMBL:KHO50884.1}; species="Archaea.;" source="archaeon GW2011_AR11.;"
gspF2; type II secretion system protein F GspF2 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Type II secretion system protein F GspF2
CG10_big_fil_rev_8_21_14_0.10_scaffold_539_c_22
AR15, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(17699..18127)
DNA (429bp) protein (143aa)
id=5799756 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Tax=AR15
CG10_big_fil_rev_8_21_14_0.10_scaffold_539_c_23
unknown

Not on your lists

18257..18958
DNA (702bp) protein (234aa)

This feature has no annotations

CG10_big_fil_rev_8_21_14_0.10_scaffold_539_c_24
RBG_19FT_COMBO_Nitrospirae_42_15_curated, Nitrospirae, Bacteria

Not on your lists

comp(18970..20118)
DNA (1149bp) protein (383aa)
Tax=RBG_19FT_COMBO_Nitrospirae_42_15_curated
CG10_big_fil_rev_8_21_14_0.10_scaffold_539_c_25
unknown

Not on your lists

comp(20105..20794)
DNA (690bp) protein (230aa)

This feature has no annotations

CG10_big_fil_rev_8_21_14_0.10_scaffold_539_c_26
Lysinibacillus varians, Lysinibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(20801..22006)
DNA (1206bp) protein (402aa)
N-acetyl-alpha-D-glucosaminyl L-malate synthase Tax=Bacillus sp. 10403023 RepID=UPI00028938C8
N-acetyl-alpha-D-glucosaminyl L-malate synthase
N-acetyl-alpha-D-glucosaminyl L-malate synthase {ECO:0000313|EMBL:AHN21322.1}; species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Lysinibacillus.;" source="Lysinibacillus varians.;"
CG10_big_fil_rev_8_21_14_0.10_scaffold_539_c_27
unknown

Not on your lists

comp(22117..22785)
DNA (669bp) protein (223aa)

This feature has no annotations

CG10_big_fil_rev_8_21_14_0.10_scaffold_539_c_28

Not on your lists

23075..23680
DNA (606bp) protein (202aa)
Uncharacterized protein {ECO:0000313|EMBL:KHO51932.1}; species="Archaea.;" source="archaeon GW2011_AR17.;"
metallophosphoesterase; K07096 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Metallophosphoesterase
CG10_big_fil_rev_8_21_14_0.10_scaffold_539_c_29
AR9, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(23677..24840)
DNA (1164bp) protein (388aa)
Tyw1, RGD1310420, Rsafd1; tRNA-yW synthesizing protein 1 homolog (S. cerevisiae); K15449 tRNA wybutosine-synthesizing protein 1 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Wyosine base formation domain-containing protein
Tax=AR9
CG10_big_fil_rev_8_21_14_0.10_scaffold_539_c_30
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

Not on your lists

24893..25309
DNA (417bp) protein (139aa)
hypothetical protein Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00037FD838
hypothetical protein
Tax=RBG_13_Woesearchaeota_36_6_curated
Displaying items 1-30 of 55 in total

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