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CG10_big_fil_rev_8_21_14_0.10_scaffold_4740_c

Search features with annotation key words

Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
CG10_big_fil_rev_8_21_14_0.10_scaffold_4740_c_1
unknown

Not on your lists

comp(3..305)
DNA (303bp) protein (101aa)

This feature has no annotations

CG10_big_fil_rev_8_21_14_0.10_scaffold_4740_c_2
unknown

Not on your lists

comp(305..769)
DNA (465bp) protein (155aa)

This feature has no annotations

CG10_big_fil_rev_8_21_14_0.10_scaffold_4740_c_3
RBG_13_Euryarchaeota_31_8_curated, Euryarchaeota, Archaea

Not on your lists

853..1452
DNA (600bp) protein (200aa)
GCN5-related N-acetyltransferase Tax=uncultured bacterium RepID=K1ZIY2_9BACT
Tax=RBG_13_Euryarchaeota_31_8_curated
CG10_big_fil_rev_8_21_14_0.10_scaffold_4740_c_4

Not on your lists

comp(1465..2718)
DNA (1254bp) protein (418aa)
Uncharacterized protein containing a von Willebrand factor type A (VWA) domain bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Uncharacterized protein {ECO:0000313|EMBL:KHO45174.1}; species="Archaea.;" source="archaeon GW2011_AR3.;"
ChlI_ChlD; Mg-chelatase subunit ChlI/Chld
CG10_big_fil_rev_8_21_14_0.10_scaffold_4740_c_5

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comp(2681..3655)
DNA (975bp) protein (325aa)
ChlI_ChlD; Mg-chelatase subunit ChlI/Chld; K03405 magnesium chelatase subunit I [EC:6.6.1.1] bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Mg-chelatase subunit ChlI/Chld, magnesium chelatase subunit I {ECO:0000313|EMBL:KHO45173.1}; EC=6.6.1.1 {ECO:0000313|EMBL:KHO45173.1};; species="Archaea.;" source="archaeon GW2011_AR3.;"
hypothetical protein
CG10_big_fil_rev_8_21_14_0.10_scaffold_4740_c_6

Not on your lists

3801..4298
DNA (498bp) protein (166aa)
Uncharacterized protein {ECO:0000313|EMBL:KHO51009.1}; species="Archaea.;" source="archaeon GW2011_AR11.;"
Putative uncharacterized protein bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
hypothetical protein
CG10_big_fil_rev_8_21_14_0.10_scaffold_4740_c_7
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

4403..4879
DNA (477bp) protein (159aa)
transmembrane_regions bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
hypothetical protein
Tax=AR11
CG10_big_fil_rev_8_21_14_0.10_scaffold_4740_c_8
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

comp(4927..5490)
DNA (564bp) protein (188aa)
hypothetical protein; K07572 putative nucleotide binding protein bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
DNA-binding protein
Tax=CG_Woesearch_02
CG10_big_fil_rev_8_21_14_0.10_scaffold_4740_c_9
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

comp(5572..5910)
DNA (339bp) protein (113aa)
RNA polymerase II, Rpb4 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
hypothetical protein
Tax=CG_Woesearch_02
CG10_big_fil_rev_8_21_14_0.10_scaffold_4740_c_10
AR18, Woesearchaeaota, DPANN, Archaea

Not on your lists


comp(5930..6217)
DNA (288bp) protein (96aa)
50S ribosomal protein L21e; K02889 large subunit ribosomal protein L21e bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
50S ribosomal protein L21e
Tax=AR18
CG10_big_fil_rev_8_21_14_0.10_scaffold_4740_c_11

Not on your lists


comp(6231..6977)
DNA (747bp) protein (249aa)
50S ribosomal protein L11; K02867 large subunit ribosomal protein L11 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Large subunit ribosomal protein L11 {ECO:0000313|EMBL:KHO46636.1}; species="Archaea.;" source="archaeon GW2011_AR3.;"
50S ribosomal protein L11
CG10_big_fil_rev_8_21_14_0.10_scaffold_4740_c_12

Not on your lists


comp(7103..7678)
DNA (576bp) protein (192aa)
NusG antitermination factor; K02601 transcriptional antiterminator NusG bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Transcription elongation factor Spt5 {ECO:0000256|HAMAP-Rule:MF_00950}; species="Archaea.;" source="archaeon GW2011_AR3.;"
LSU ribosomal protein L24A Rpl24A
CG10_big_fil_rev_8_21_14_0.10_scaffold_4740_c_13
Methanobrevibacter smithii, Methanobrevibacter, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

Not on your lists

comp(7723..7965)
DNA (243bp) protein (81aa)
preprotein translocase subunit SecE Tax=Methanobrevibacter smithii RepID=UPI0003829DE1
secE; preprotein translocase subunit SecE
Protein translocase subunit SecE {ECO:0000255|HAMAP-Rule:MF_00422}; Protein transport protein Sec61 gamma subunit homolog {ECO:0000255|HAMAP-Rule:MF_00422}; species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanobacteriaceae; Methanobrevibacter.;" source="Methanobrevibacter smithii (strain PS / ATCC 35061 / DSM 861).;"
CG10_big_fil_rev_8_21_14_0.10_scaffold_4740_c_14

Not on your lists

comp(8001..9098)
DNA (1098bp) protein (366aa)
cell division protein FtsZ; K03531 cell division protein FtsZ bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Cell division protein FtsZ {ECO:0000256|HAMAP-Rule:MF_00909, ECO:0000256|RuleBase:RU003360}; species="Archaea.;" source="archaeon GW2011_AR3.;"
Cell division protein FtsZ
CG10_big_fil_rev_8_21_14_0.10_scaffold_4740_c_15

Not on your lists

comp(9201..9959)
DNA (759bp) protein (253aa)
peptidyl-prolyl cis-trans isomerase; K03775 FKBP-type peptidyl-prolyl cis-trans isomerase SlyD [EC:5.2.1.8] bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU004231}; species="Archaea.;" source="archaeon GW2011_AR3.;"
Peptidyl-prolyl cis-trans isomerase
CG10_big_fil_rev_8_21_14_0.10_scaffold_4740_c_16
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

10183..11253
DNA (1071bp) protein (357aa)
tRNA (Cytosine-48,49-C(5)-) methyltransferase bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
RNA methylase, NOL1/NOP2/sun family
Tax=AR11
CG10_big_fil_rev_8_21_14_0.10_scaffold_4740_c_17
AR4, Woesearchaeaota, DPANN, Archaea

Not on your lists


comp(11372..11809)
DNA (438bp) protein (146aa)
rps12P; 30S ribosomal protein S12; K02950 small subunit ribosomal protein S12 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
30S ribosomal protein S12
Tax=AR4
CG10_big_fil_rev_8_21_14_0.10_scaffold_4740_c_18
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

comp(11837..12253)
DNA (417bp) protein (139aa)
transcription elongation factor NusA-like protein; K02600 N utilization substance protein A bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
hypothetical protein
Tax=CG_Woesearch_02
CG10_big_fil_rev_8_21_14_0.10_scaffold_4740_c_19

Not on your lists

comp(12275..12529)
DNA (255bp) protein (85aa)
LSU ribosomal protein L30E Tax=nanoarchaeote Nst1 RepID=R1E488_9ARCH
Ribosomal protein L30e (RP-L30e, RPL30) {ECO:0000313|EMBL:AIF00801.1}; species="Archaea; Euryarchaeota; environmental samples.;" source="uncultured marine group II/III euryarchaeote KM3_139_C07.;"
50S ribosomal protein L30e
CG10_big_fil_rev_8_21_14_0.10_scaffold_4740_c_20
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

comp(12579..13193)
DNA (615bp) protein (205aa)
DNA-directed RNA polymerase subunit A'' bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
DNA-directed RNA polymerase subunit A''
Tax=CG_Woesearch_02
Displaying 20 items

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