ggKbase home page

CG17_big_fil_post_rev_8_21_14_2.50_scaffold_5089_c

Search features with annotation key words

Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
CG17_big_fil_post_rev_8_21_14_2.50_scaffold_5089_c_1
RIFOXYB2_FULL_OP11_Roizmanbacteria_38_10_curated, Roizmannbacteria, Microgenomates, Bacteria

Not on your lists

3..518
DNA (516bp) protein (172aa)
Major facilitator superfamily protein (Fragment) Tax=uncultured bacterium RepID=K2E838_9BACT
Putative major facilitator superfamily MFS_1. Putative tetracycline resistance protein, class E
Tax=RIFOXYB2_FULL_OP11_Roizmanbacteria_38_10_curated
CG17_big_fil_post_rev_8_21_14_2.50_scaffold_5089_c_2
GWA2_OP11_46_16_partial, Microgenomates, Bacteria

Not on your lists

comp(520..831)
DNA (312bp) protein (104aa)
coiled-coil 76..104 bin=ACD40 species=ACD40 genus=ACD40 taxon_order=ACD40 taxon_class=ACD40 phylum=OP11 tax=ACD40 organism_group=OP11 (Microgenomates) organism_desc=OP11
SSU ribosomal protein S30P {ECO:0000313|EMBL:KKU26617.1}; species="Bacteria; Microgenomates.;" source="Microgenomates bacterium GW2011_GWA2_46_16.;"
30S ribosomal protein S30P
CG17_big_fil_post_rev_8_21_14_2.50_scaffold_5089_c_3
Microgenomates bacterium GW2011_GWA1_46_7, Microgenomates, Bacteria

Not on your lists

comp(853..1287)
DNA (435bp) protein (145aa)
hypothetical protein bin=ACD40 species=ACD40 genus=ACD40 taxon_order=ACD40 taxon_class=ACD40 phylum=OP11 tax=ACD40 organism_group=OP11 (Microgenomates) organism_desc=OP11
Methyltransferase FkbM family protein {ECO:0000313|EMBL:KKU44289.1}; species="Bacteria; Microgenomates.;" source="Microgenomates bacterium GW2011_GWA1_46_7.;"
CG17_big_fil_post_rev_8_21_14_2.50_scaffold_5089_c_4
Microgenomates bacterium GW2011_GWF1_46_12, Microgenomates, Bacteria

Not on your lists

1991..2281
DNA (291bp) protein (97aa)
HTH domain-containing protein bin=ACD40 species=ACD40 genus=ACD40 taxon_order=ACD40 taxon_class=ACD40 phylum=OP11 tax=ACD40 organism_group=OP11 (Microgenomates) organism_desc=OP11
HTH domain-containing protein {ECO:0000313|EMBL:KKU20697.1}; species="Bacteria; Microgenomates.;" source="Microgenomates bacterium GW2011_GWF1_46_12.;"
transcriptional regulator, XRE family
CG17_big_fil_post_rev_8_21_14_2.50_scaffold_5089_c_5
R_OP11_Gottesmanbacteria_49_10, Gottesmanbacteria, Microgenomates, Bacteria

Not on your lists

2475..2720
DNA (246bp) protein (82aa)
excinuclease ABC, C subunit-like protein bin=ACD52 species=ACD52 genus=ACD52 taxon_order=ACD52 taxon_class=ACD52 phylum=OP11 tax=ACD52 organism_group=OP11 (Microgenomates) organism_desc=OP11
excinuclease ABC subunit C-like protein
Tax=RIFCSPLOWO2_01_FULL_OP11_Gottesmanbacteria_49_10_curated
CG17_big_fil_post_rev_8_21_14_2.50_scaffold_5089_c_6
unknown

Not on your lists

3026..3169
DNA (144bp) protein (48aa)

This feature has no annotations

CG17_big_fil_post_rev_8_21_14_2.50_scaffold_5089_c_7
GWA1_OD1_37_20_partial, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

3521..3715
DNA (195bp) protein (65aa)
Transcriptional regulator, XRE family {ECO:0000313|EMBL:KKQ32174.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria (Nomurabacteria) bacterium GW2011_GWA1_37_20.;"
Transcriptional regulator, XRE family bin=GWC1_OD1_38_17 species=ACD76 genus=ACD76 taxon_order=ACD76 taxon_class=ACD76 phylum=OD1 tax=GWC1_OD1_38_17 organism_group=OD1 (Parcubacteria) organism_desc=Good + Candidate for curation
XRE family transcriptional regulator
CG17_big_fil_post_rev_8_21_14_2.50_scaffold_5089_c_8
CG_Pacearch_06, Pacearchaeota, Archaea

Not on your lists

3720..4547
DNA (828bp) protein (276aa)
MjaII restriction endonuclease Tax=Prevotella disiens JCM 6334 = ATCC 29426 RepID=U2IZ73_9BACT
MjaII restriction endonuclease
Tax=CG_Pacearch_06
CG17_big_fil_post_rev_8_21_14_2.50_scaffold_5089_c_9
RIFOXYD1_FULL_OP11_Daviesbacteria_41_10_curated, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

4550..5671
DNA (1122bp) protein (374aa)
DNA adenine methylase (dam) (EC:2.1.1.72)
hypothetical protein Tax=Megamonas rupellensis RepID=UPI000379AE08
Tax=RIFOXYD1_FULL_OP11_Daviesbacteria_41_10_curated
CG17_big_fil_post_rev_8_21_14_2.50_scaffold_5089_c_10
GWB1_OP11_41_5, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

5678..6454
DNA (777bp) protein (259aa)
ccrM; modification methylase CcrM (EC:2.1.1.72)
DNA methylase N-4/N-6 Tax=Ruegeria sp. (strain TM1040) RepID=Q1GD85_RUEST
Methylase N-4/N-6 protein {ECO:0000313|EMBL:KKS14322.1}; species="Bacteria; Microgenomates.;" source="Microgenomates (Daviesbacteria) bacterium GW2011_GWB1_41_5.;"
CG17_big_fil_post_rev_8_21_14_2.50_scaffold_5089_c_11
RBG_13_OD1_Falkowbacteria_36_9_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

6444..6848
DNA (405bp) protein (135aa)
Putative uncharacterized protein Tax=Nitrosomonas europaea (strain ATCC 19718 / NBRC 14298) RepID=Q82T31_NITEU bin=GWF1_OP11_31_35_complete species=Nitrosomonas europaea genus=Nitrosomonas taxon_order=Nitrosomonadales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_OP11_31_35_complete organism_group=OP11 (Microgenomates) organism_desc=Complete genome (was OP11_1)
hypothetical protein
Tax=RBG_13_OD1_Falkowbacteria_36_9_curated
CG17_big_fil_post_rev_8_21_14_2.50_scaffold_5089_c_12
BJP_IG2158_Actinobacteria_57_21, Bacteria

Not on your lists

6853..7224
DNA (372bp) protein (124aa)
hypothetical protein Tax=Omnitrophica bacterium SCGC AAA252-B19 RepID=UPI00036285CA
hypothetical protein
Tax=BJP_IG2158_Actinobacteria_57_21
CG17_big_fil_post_rev_8_21_14_2.50_scaffold_5089_c_13

Not on your lists

7234..7839
DNA (606bp) protein (202aa)
Putative uncharacterized protein Tax=Chlorobium limicola (strain DSM 245 / NBRC 103803) RepID=B3EGM6_CHLL2
Uncharacterized protein {ECO:0000313|EMBL:KKP32978.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC2_32_10.;"
hypothetical protein
Displaying 13 items

View Taxonomy