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CG22_combo_CG10-13_8_21_14_all_scaffold_3493_c

Search features with annotation key words

Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
CG22_combo_CG10-13_8_21_14_all_scaffold_3493_c_1
R_PER_ii_49_16, PER-ii, Bacteria

Not on your lists

31..522
DNA (492bp) protein (164aa)
Tax=RIFCSPHIGHO2_02_FULL_PER_ii_49_16_curated
CG22_combo_CG10-13_8_21_14_all_scaffold_3493_c_2
R_PER_ii_49_16, PER-ii, Bacteria

Not on your lists

comp(1048..1863)
DNA (816bp) protein (272aa)
UDP-glucose pyrophosphorylase (EC:2.7.7.9); K00963 UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] bin=PER_GWA2_38_35 species=PER_GWC2_39_15 genus=PER_GWC2_39_15 taxon_order=PER_GWC2_39_15 taxon_class=PER_GWC2_39_15 phylum=PER tax=PER_GWA2_38_35 organism_group=PER (Peregrinibacteria) organism_desc=This is the curated version (7 contigs can be represented as 5 scaffolds)
gtaB; protein GtaB
Tax=RIFCSPHIGHO2_02_FULL_PER_ii_49_16_curated
CG22_combo_CG10-13_8_21_14_all_scaffold_3493_c_3
R_PER_ii_49_16, PER-ii, Bacteria

Not on your lists

1958..2245
DNA (288bp) protein (96aa)
Tax=RIFCSPHIGHO2_02_FULL_PER_ii_49_16_curated
CG22_combo_CG10-13_8_21_14_all_scaffold_3493_c_4
R_PER_ii_49_16, PER-ii, Bacteria

Not on your lists

comp(2232..2669)
DNA (438bp) protein (146aa)
Protein containing Heat shock protein Hsp20 domain bin=GWC1_CPR2_39_9 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Candidatus Saccharibacteria tax=GWC1_CPR2_39_9 organism_group=CPR2 organism_desc=Good
hypothetical protein
Tax=RIFCSPHIGHO2_02_FULL_PER_ii_49_16_curated
CG22_combo_CG10-13_8_21_14_all_scaffold_3493_c_5
R_PER_ii_49_16, PER-ii, Bacteria

Not on your lists

2855..3082
DNA (228bp) protein (76aa)
Putative transcriptional regulator bin=GWC1_Spirochaetes_27_15 species=Sphaerochaeta pleomorpha genus=Sphaerochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWC1_Spirochaetes_27_15 organism_group=Spirochaetes
XRE family transcriptional regulator
Tax=RIFCSPHIGHO2_02_FULL_PER_ii_49_16_curated
CG22_combo_CG10-13_8_21_14_all_scaffold_3493_c_6
R_PER_ii_49_16, PER-ii, Bacteria

Not on your lists

comp(3007..4686)
DNA (1680bp) protein (560aa)
Single-stranded-DNA-specific exonuclease RecJ Tax=Streptococcus pseudoporcinus RepID=E4L3X7_9STRE
single-stranded-DNA-specific exonuclease RecJ
Tax=RIFCSPHIGHO2_02_FULL_PER_ii_49_16_curated
CG22_combo_CG10-13_8_21_14_all_scaffold_3493_c_7
R_PER_ii_49_16, PER-ii, Bacteria

Not on your lists

comp(4756..5259)
DNA (504bp) protein (168aa)
Tax=RIFCSPHIGHO2_02_FULL_PER_ii_49_16_curated
CG22_combo_CG10-13_8_21_14_all_scaffold_3493_c_8
R_PER_ii_49_16, PER-ii, Bacteria

Not on your lists

comp(5341..6393)
DNA (1053bp) protein (351aa)
Thrombospondin type 3 repeat family Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=Q09E52_STIAD
thrombospondin type 3 repeat family
Tax=RIFCSPHIGHO2_02_FULL_PER_ii_49_16_curated
CG22_combo_CG10-13_8_21_14_all_scaffold_3493_c_9
R_PER_ii_49_16, PER-ii, Bacteria

Not on your lists

6471..7538
DNA (1068bp) protein (356aa)
dnaJ; chaperone protein DnaJ; K03686 molecular chaperone DnaJ bin=PER_GWA2_38_35 species=PERA2_38_36 genus=PERA2_38_36 taxon_order=PERA2_38_36 taxon_class=PERA2_38_36 phylum=PER tax=PER_GWA2_38_35 organism_group=PER (Peregrinibacteria) organism_desc=This is the curated version (7 contigs can be represented as 5 scaffolds)
hypothetical protein
Tax=RIFCSPHIGHO2_02_FULL_PER_ii_49_16_curated
CG22_combo_CG10-13_8_21_14_all_scaffold_3493_c_10
R_PER_ii_49_16, PER-ii, Bacteria

Not on your lists

comp(7535..8071)
DNA (537bp) protein (179aa)
Uncharacterized protein Tax=uncultured bacterium RepID=K2ARA1_9BACT
DNA/RNA-binding protein
Tax=RIFCSPHIGHO2_02_FULL_PER_ii_49_16_curated
CG22_combo_CG10-13_8_21_14_all_scaffold_3493_c_11
R_PER_ii_49_16, PER-ii, Bacteria

Not on your lists

comp(8162..8437)
DNA (276bp) protein (92aa)
hupA; transcriptional dual regulator HU-alpha; K03530 DNA-binding protein HU-beta bin=PER_GWF2_39_17 species=PER_GWE2_38_7 genus=PER_GWE2_38_7 taxon_order=PER_GWE2_38_7 taxon_class=PER_GWE2_38_7 phylum=PER tax=PER_GWF2_39_17 organism_group=PER (Peregrinibacteria)
HU, DNA-binding transcriptional regulator subunit beta
Tax=RIFCSPHIGHO2_02_FULL_PER_ii_49_16_curated
CG22_combo_CG10-13_8_21_14_all_scaffold_3493_c_12
R_PER_ii_49_16, PER-ii, Bacteria

Not on your lists

8620..10983
DNA (2364bp) protein (788aa)
DNA topoisomerase bin=GWE2_OD1_46_68 species=GWE2_OD1_46_68 genus=GWE2_OD1_46_68 taxon_order=GWE2_OD1_46_68 taxon_class=GWE2_OD1_46_68 phylum=OD1 tax=GWE2_OD1_46_68 organism_group=OD1 (Parcubacteria)
DNA topoisomerase I
Tax=RIFCSPHIGHO2_02_FULL_PER_ii_49_16_curated
CG22_combo_CG10-13_8_21_14_all_scaffold_3493_c_13
R_PER_ii_49_16, PER-ii, Bacteria

Not on your lists

11059..11490
DNA (432bp) protein (144aa)
Uncharacterized protein Tax=uncultured bacterium RepID=K2FC95_9BACT
Tax=RIFCSPHIGHO2_02_FULL_PER_ii_49_16_curated
Displaying 13 items

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