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CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_35670_c

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_35670_c_1
OP11_GWA2_32_13, Roizmanbacteria, Microgenomates, Bacteria

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178..384
DNA (207bp) protein (69aa)
Helix-turn-helix domain protein {ECO:0000313|EMBL:KKP32863.1}; species="Bacteria; Microgenomates.;" source="Microgenomates (Roizmanbacteria) bacterium GW2011_GWA2_32_13.;"
Helix-turn-helix domain protein bin=GWC2_OD1_43_27 species=PER_GWF2_39_17 genus=PER_GWF2_39_17 taxon_order=PER_GWF2_39_17 taxon_class=PER_GWF2_39_17 phylum=PER tax=GWC2_OD1_43_27 organism_group=OD1 (Parcubacteria) organism_desc=Same as C1_43_61 and D1_43_18 Curated this version (complete)
helix-turn-helix domain-containing protein
CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_35670_c_2
R_RIF_OD1_07_47_27, RIF-OD1-7, Parcubacteria, Bacteria

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389..1129
DNA (741bp) protein (247aa)
Putative uncharacterized protein bin=GWC2_Deltaproteobacteria_42_51 species=Brachyspira hampsonii genus=Brachyspira taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWC2_Deltaproteobacteria_42_51 organism_group=Deltaproteobacteria
hypothetical protein
Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_07_47_27_curated
CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_35670_c_3
R_RIF_OD1_07_47_27, RIF-OD1-7, Parcubacteria, Bacteria

Not on your lists

1132..2133
DNA (1002bp) protein (334aa)
Putative uncharacterized protein bin=GWC2_Deltaproteobacteria_42_51 species=Ostreococcus lucimarinus virus OlV1 genus=Prasinovirus taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Deltaproteobacteria_42_51 organism_group=Deltaproteobacteria
Csp231I DNA methyltransferase
Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_07_47_27_curated
CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_35670_c_4
GWA2_OD1_56_11, Magasanikbacteria, Parcubacteria, Bacteria

Not on your lists

2138..3073
DNA (936bp) protein (312aa)
Uncharacterized protein {ECO:0000313|EMBL:KKW41722.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria (Magasanikbacteria) bacterium GW2011_GWA2_56_11.;"
Putative uncharacterized protein bin=GWA2_Elusimicrobia_56_46 species=unknown genus=Nitratiruptor taxon_order=unknown taxon_class=Epsilonproteobacteria phylum=Proteobacteria tax=GWA2_Elusimicrobia_56_46 organism_group=Elusimicrobia organism_desc=Good
hypothetical protein
CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_35670_c_5
GWF2_Bacteroidetes_41_31_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(3384..4004)
DNA (621bp) protein (207aa)
Glycoprotein gp2 (Fragment) Tax=Equid herpesvirus 1 RepID=Q8V0L6_9ALPH
Tax=GWF2_Bacteroidetes_41_31_curated
CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_35670_c_6
GWE1_Berkelbacteria_39_12, Berkelbacteria, Bacteria

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4146..5303
DNA (1158bp) protein (386aa)
Type IV-A pilus assembly ATPase PilB bin=GWE1_ACD58_39_12 species=ACD58_39_12 genus=ACD58_39_12 taxon_order=ACD58_39_12 taxon_class=ACD58_39_12 phylum=ACD58 tax=GWE1_ACD58_39_12 organism_group=ACD58 (Berkelbacteria) organism_desc=Replace with complete genome
gspE; general secretory pathway component, cryptic
Tax=GWE1_Berkelbacteria_39_12
CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_35670_c_7
unknown

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5463..6494
DNA (1032bp) protein (344aa)

This feature has no annotations

CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_35670_c_8
unknown

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6433..6741
DNA (309bp) protein (103aa)

This feature has no annotations

CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_35670_c_9
RBG_13_Berkelbacteria_40_8_curated, Berkelbacteria, Bacteria

Not on your lists

comp(6902..7171)
DNA (270bp) protein (90aa)
conserved membrane protein of unknown function bin=GWE1_Berkelbacteria_39_12 species=ACD58_39_12 genus=ACD58_39_12 taxon_order=ACD58_39_12 taxon_class=ACD58_39_12 phylum=ACD58 tax=GWE1_Berkelbacteria_39_12 organism_group=ACD58 (Berkelbacteria) organism_desc=Complete genome (ACD58 lineage)
membrane protein
Tax=RBG_13_Berkelbacteria_40_8_curated
Displaying 9 items

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