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CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_97_c

Search features with annotation key words

Displaying items 1-30 of 50 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_97_c_1

Not on your lists

2..316
DNA (315bp) protein (105aa)
Putative uncharacterized protein Tax=uncultured archaeon RepID=D1JDX9_9ARCH
Marine sediment metagenome DNA, contig: S12H4_L03471 {ECO:0000313|EMBL:GAI80598.1}; Flags: Fragment;; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_97_c_2
R_OD1_Wolfebacteria_45_10c, Wolfebacteria, Parcubacteria, Bacteria

Not on your lists

535..1050
DNA (516bp) protein (172aa)
Tax=RIFCSPLOWO2_02_FULL_OD1_Wolfebacteria_45_10c_curated
CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_97_c_3
unknown

Not on your lists

1058..1276
DNA (219bp) protein (73aa)

This feature has no annotations

CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_97_c_4
R_Berkelbacteria_36_9, Berkelbacteria, Bacteria

Not on your lists


comp(1183..3732)
DNA (2550bp) protein (850aa)
gyrA; DNA gyrase (subunit A) (EC:5.99.1.3) bin=GWE1_Berkelbacteria_39_12 species=ACD58_39_12 genus=ACD58_39_12 taxon_order=ACD58_39_12 taxon_class=ACD58_39_12 phylum=ACD58 tax=GWE1_Berkelbacteria_39_12 organism_group=ACD58 (Berkelbacteria) organism_desc=Complete genome (ACD58 lineage)
gyrA; DNA gyrase (subunit A) (EC:5.99.1.3)
Tax=RIFCSPHIGHO2_12_FULL_Berkelbacteria_36_9_curated
CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_97_c_5
GWE1_Berkelbacteria_39_12, Berkelbacteria, Bacteria

Not on your lists

comp(3732..5639)
DNA (1908bp) protein (636aa)
DNA gyrase subunit B (EC:5.99.1.3); K02470 DNA gyrase subunit B [EC:5.99.1.3] bin=GWE1_Berkelbacteria_39_12 species=ACD58_39_12 genus=ACD58_39_12 taxon_order=ACD58_39_12 taxon_class=ACD58_39_12 phylum=ACD58 tax=GWE1_Berkelbacteria_39_12 organism_group=ACD58 (Berkelbacteria) organism_desc=Complete genome (ACD58 lineage)
DNA gyrase subunit B (EC:5.99.1.3)
Tax=GWE1_Berkelbacteria_39_12
CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_97_c_6
unknown

Not on your lists

comp(5783..6136)
DNA (354bp) protein (118aa)

This feature has no annotations

CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_97_c_7
R_Berkelbacteria_36_9, Berkelbacteria, Bacteria

Not on your lists

comp(6209..7510)
DNA (1302bp) protein (434aa)
Putative uncharacterized protein bin=GWE1_Berkelbacteria_39_12 species=ACD58_39_12 genus=ACD58_39_12 taxon_order=ACD58_39_12 taxon_class=ACD58_39_12 phylum=ACD58 tax=GWE1_Berkelbacteria_39_12 organism_group=ACD58 (Berkelbacteria) organism_desc=Complete genome (ACD58 lineage)
GDP-mannose 4,6 dehydratase ISS
Tax=RIFCSPHIGHO2_12_FULL_Berkelbacteria_36_9_curated
CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_97_c_8
R_Berkelbacteria_36_9, Berkelbacteria, Bacteria

Not on your lists

comp(7753..8373)
DNA (621bp) protein (207aa)
hypothetical protein bin=GWE1_Berkelbacteria_39_12 species=ACD58_39_12 genus=ACD58_39_12 taxon_order=ACD58_39_12 taxon_class=ACD58_39_12 phylum=ACD58 tax=GWE1_Berkelbacteria_39_12 organism_group=ACD58 (Berkelbacteria) organism_desc=Complete genome (ACD58 lineage)
Tax=RIFCSPHIGHO2_12_FULL_Berkelbacteria_36_9_curated
CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_97_c_9
CG_CPR16-01, CG_CPR16, Bacteria

Not on your lists

comp(8382..9479)
DNA (1098bp) protein (366aa)
hypothetical protein Tax=Orenia marismortui RepID=UPI000367CF15
group 1 glycosyl transferase
Tax=CG_CPR16-01
CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_97_c_10
GWE1_Berkelbacteria_39_12, Berkelbacteria, Bacteria

Not on your lists

comp(9479..10966)
DNA (1488bp) protein (496aa)
UDP-phosphate glucose phosphotransferase (EC:2.7.8.-)
Undecaprenyl-phosphate glucose phosphotransferase bin=GWE1_ACD58_39_12 species=ACD58_39_12 genus=ACD58_39_12 taxon_order=ACD58_39_12 taxon_class=ACD58_39_12 phylum=ACD58 tax=GWE1_ACD58_39_12 organism_group=ACD58 (Berkelbacteria) organism_desc=Replace with complete genome
Tax=GWE1_Berkelbacteria_39_12
CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_97_c_11
RBG_13_Berkelbacteria_40_8_curated, Berkelbacteria, Bacteria

Not on your lists

comp(11008..11214)
DNA (207bp) protein (69aa)
Putative uncharacterized protein bin=GWE1_ACD58_39_12 species=ACD58_39_12 genus=ACD58_39_12 taxon_order=ACD58_39_12 taxon_class=ACD58_39_12 phylum=ACD58 tax=GWE1_ACD58_39_12 organism_group=ACD58 (Berkelbacteria) organism_desc=Replace with complete genome
hypothetical protein
Tax=RBG_13_Berkelbacteria_40_8_curated
CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_97_c_12
Lyngbya aestuarii, Lyngbya, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(11460..11855)
DNA (396bp) protein (132aa)
VKORC1/thioredoxin domain protein Tax=Lyngbya aestuarii BL J RepID=U7QDU1_9CYAN
vitamin K epoxide reductase
VKORC1/thioredoxin domain protein {ECO:0000313|EMBL:ERT06003.1}; species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Lyngbya.;" source="Lyngbya aestuarii BL J.;"
CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_97_c_13
RIFOXYA2_FULL_Berkelbacteria_43_10_curated, Berkelbacteria, Bacteria

Not on your lists

comp(11921..13366)
DNA (1446bp) protein (482aa)
Uncharacterized protein Tax=uncultured bacterium RepID=K2F734_9BACT
Mn2+/Fe2-transporter, NRAMP family
Tax=RIFOXYA2_FULL_Berkelbacteria_43_10_curated
CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_97_c_14
RIFOXYC2_FULL_OD1_Nomurabacteria_36_19_curated, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(13426..14148)
DNA (723bp) protein (241aa)
Uncharacterized protein (Fragment) Tax=uncultured bacterium RepID=K1ZL70_9BACT
permease
Tax=RIFOXYC2_FULL_OD1_Nomurabacteria_36_19_curated
CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_97_c_15
GWD2_OD1_39_48_partial, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists

14244..15179
DNA (936bp) protein (312aa)
D-alanyl-alanine synthetase A {ECO:0000313|EMBL:KKR23923.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria (Yanofskybacteria) bacterium GW2011_GWD2_39_48.;"
D-alanine--D-alanine ligase B bin=GWE1_ACD58_39_12 species=ACD58_39_12 genus=ACD58_39_12 taxon_order=ACD58_39_12 taxon_class=ACD58_39_12 phylum=ACD58 tax=GWE1_ACD58_39_12 organism_group=ACD58 (Berkelbacteria) organism_desc=Replace with complete genome
ddl; D-alanyl-alanine synthetase A
CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_97_c_16
GWE1_Berkelbacteria_39_12, Berkelbacteria, Bacteria

Not on your lists

comp(15274..17955)
DNA (2682bp) protein (894aa)
P-type HAD superfamily ATPase bin=GWE1_Berkelbacteria_39_12 species=ACD58_39_12 genus=ACD58_39_12 taxon_order=ACD58_39_12 taxon_class=ACD58_39_12 phylum=ACD58 tax=GWE1_Berkelbacteria_39_12 organism_group=ACD58 (Berkelbacteria) organism_desc=Complete genome (ACD58 lineage)
cation-transporting ATPase, E1-E2 family
Tax=GWE1_Berkelbacteria_39_12
CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_97_c_17

Not on your lists

18374..19666
DNA (1293bp) protein (431aa)
Uncharacterized protein Tax=uncultured bacterium RepID=K2B4E2_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EKD56894.1}; species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein
CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_97_c_trna_2
unknown

Not on your lists

comp(19751..19821)
DNA (71bp)
transferRNA Gln
CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_97_c_18
GWA2_Berkelbacteria_35_9, Berkelbacteria, Bacteria

Not on your lists

comp(19879..21516)
DNA (1638bp) protein (546aa)
CTP synthase (EC:6.3.4.2)
CTP synthase Tax=Methanocaldococcus infernus (strain DSM 11812 / JCM 15783 / ME) RepID=D5VQR1_METIM
CTP synthase {ECO:0000313|EMBL:KKP88687.1}; species="Bacteria; Berkelbacteria.;" source="Berkelbacteria bacterium GW2011_GWA2_35_9.;"
CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_97_c_19
RBG_13_Berkelbacteria_40_8_curated, Berkelbacteria, Bacteria

Not on your lists

comp(21509..22366)
DNA (858bp) protein (286aa)
hypothetical protein bin=GWE1_Berkelbacteria_39_12 species=ACD58_39_12 genus=ACD58_39_12 taxon_order=ACD58_39_12 taxon_class=ACD58_39_12 phylum=ACD58 tax=GWE1_Berkelbacteria_39_12 organism_group=ACD58 (Berkelbacteria) organism_desc=Complete genome (ACD58 lineage)
extradiol ring-cleavage dioxygenase class III protein subunit B
Tax=RBG_13_Berkelbacteria_40_8_curated
CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_97_c_20
CG_CPR04_01, CG_CPR04, Bacteria

Not on your lists

comp(22507..23556)
DNA (1050bp) protein (350aa)
Radical SAM domain protein Tax=Thermodesulfatator indicus (strain DSM 15286 / JCM 11887 / CIR29812) RepID=F8ACD0_THEID
Radical SAM domain-containing protein
Tax=CG_CPR04_01
CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_97_c_21

Not on your lists

23611..24246
DNA (636bp) protein (212aa)
Uncharacterized protein Tax=uncultured bacterium RepID=K1YM38_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EKD44045.1}; species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
phosphoribosyltransferase
CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_97_c_22
GWA1_Berkelbacteria_39_10_partial, Berkelbacteria, Bacteria

Not on your lists

comp(24264..24854)
DNA (591bp) protein (197aa)
signal peptidase I (EC:3.4.21.89)
Signal peptidase I {ECO:0000313|EMBL:KKQ90447.1}; species="Bacteria; Berkelbacteria.;" source="Berkelbacteria bacterium GW2011_GWA1_39_10.;"
Signal peptidase I bin=GWE1_ACD58_39_12 species=ACD58_39_12 genus=ACD58_39_12 taxon_order=ACD58_39_12 taxon_class=ACD58_39_12 phylum=ACD58 tax=GWE1_ACD58_39_12 organism_group=ACD58 (Berkelbacteria) organism_desc=Replace with complete genome
CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_97_c_trna_1
unknown

Not on your lists

comp(24892..24964)
DNA (73bp)
transferRNA Val
CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_97_c_23

Not on your lists

25156..25590
DNA (435bp) protein (145aa)
Marine sediment metagenome DNA, contig: S03H2_S16895 {ECO:0000313|EMBL:GAH66219.1}; Flags: Fragment;; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
TrkA-N domain protein bin=GWC1_CPR2_39_9 species=GWC1_KAZAN_52_13 genus=GWC1_KAZAN_52_13 taxon_order=GWC1_KAZAN_52_13 taxon_class=GWC1_KAZAN_52_13 phylum=KAZAN tax=GWC1_CPR2_39_9 organism_group=CPR2 organism_desc=Good
TrkA-N domain-containing protein
CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_97_c_24
GWA1_Berkelbacteria_39_10_partial, Berkelbacteria, Bacteria

Not on your lists

25621..25947
DNA (327bp) protein (109aa)
Transcriptional regulator, TraR/DksA family {ECO:0000313|EMBL:KKQ90449.1}; species="Bacteria; Berkelbacteria.;" source="Berkelbacteria bacterium GW2011_GWA1_39_10.;"
Transcriptional regulator, TraR/DksA family bin=GWE1_ACD58_39_12 species=ACD58_39_12 genus=ACD58_39_12 taxon_order=ACD58_39_12 taxon_class=ACD58_39_12 phylum=ACD58 tax=GWE1_ACD58_39_12 organism_group=ACD58 (Berkelbacteria) organism_desc=Replace with complete genome
TraR/DksA family transcriptional regulator
CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_97_c_25
R_Berkelbacteria_36_9, Berkelbacteria, Bacteria

Not on your lists

25957..26388
DNA (432bp) protein (144aa)
lipoprotein signal peptidase; K03101 signal peptidase II [EC:3.4.23.36] bin=GWF1_WS6_37_7 species=WS6_GWF1_36_7 genus=WS6_GWF1_36_7 taxon_order=WS6_GWF1_36_7 taxon_class=WS6_GWF1_36_7 phylum=WS6 tax=GWF1_WS6_37_7 organism_group=WS6 (Doikabacteria)
lspA; lipoprotein signal peptidase (EC:3.4.23.36)
Tax=RIFCSPHIGHO2_12_FULL_Berkelbacteria_36_9_curated
CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_97_c_26
CG_Berkel_02, Berkelbacteria, Bacteria

Not on your lists

comp(26385..29090)
DNA (2706bp) protein (902aa)
hypothetical protein Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI00037FE861
hypothetical protein
Tax=CG_Berkel_02
CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_97_c_27
R_Berkelbacteria_36_9, Berkelbacteria, Bacteria

Not on your lists


comp(29569..29925)
DNA (357bp) protein (119aa)
50S ribosomal protein L20 bin=GWB1_Berkelbacteria_38_5 species=ACD58_39_12 genus=ACD58_39_12 taxon_order=ACD58_39_12 taxon_class=ACD58_39_12 phylum=ACD58 tax=GWB1_Berkelbacteria_38_5 organism_group=ACD58 (Berkelbacteria)
rplT; 50S ribosomal protein L20
Tax=RIFCSPHIGHO2_12_FULL_Berkelbacteria_36_9_curated
CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_97_c_28
GWA1_Berkelbacteria_39_10_partial, Berkelbacteria, Bacteria

Not on your lists


comp(29929..30135)
DNA (207bp) protein (69aa)
50S ribosomal protein L35 bin=GWB1_Berkelbacteria_38_5 species=ACD58_39_12 genus=ACD58_39_12 taxon_order=ACD58_39_12 taxon_class=ACD58_39_12 phylum=ACD58 tax=GWB1_Berkelbacteria_38_5 organism_group=ACD58 (Berkelbacteria)
50S ribosomal protein L35 {ECO:0000313|EMBL:KKQ90455.1}; species="Bacteria; Berkelbacteria.;" source="Berkelbacteria bacterium GW2011_GWA1_39_10.;"
50S ribosomal protein L35
Displaying items 1-30 of 50 in total

View Taxonomy