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CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_585_c_14

Organism: CG23_combo_of_CG06-09_8_20_14_all_150_Berkelbacteria_40_13_curated

near complete RP 46 / 55 MC: 5 BSCG 47 / 51 ASCG 12 / 38
Location: comp(19069..19431)

Top 3 Functional Annotations

Value Algorithm Source
LAGLIDADG homing endonuclease {ECO:0000313|EMBL:KKU84785.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_47_8b.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 56.7
  • Coverage: 120.0
  • Bit_score: 149
  • Evalue 2.80e-33
Homing endonuclease bin=GWC1_OD1_38_17 species=Synechococcus sp. C9 genus=Synechococcus taxon_order=Chroococcales taxon_class=unknown phylum=Cyanobacteria tax=GWC1_OD1_38_17 organism_group=OD1 (Parcubacteria) organism_desc=Good + Candidate for curation similarity UNIREF
DB: UNIREF100
  • Identity: 41.4
  • Coverage: 116.0
  • Bit_score: 92
  • Evalue 2.30e-16

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Taxonomy

Parcubacteria bacterium GW2011_GWA2_47_8b → Parcubacteria → Bacteria

Sequences

DNA sequence
Length: 363
ATGGCAACAATCTGTTTTTATCAAGATAGTCATCATGATAAACCATTATATTGGATTCGAAAGCAACTGGATATAGGTTATATTTCTAAACGAAACGACAACATAACAGAATTACGGATTAACGGTTTTGAACAAATCGGGCAAATATTGGAAGAATTGTTGCCTTTTCTTAGATTTAAGAAGCGTCAAGCAAGAAAGATGATCAAGTGTTTGAATTTTTTACTTGTAAAAGGTAAAAATTTAGGCAAACAGGATTGTGAAAAAATAATTGATTATCTTCAATCTGTTCAAAATTTAAACTACCGATCTCATCATAAGAGAACCCGCAAGGATCTGTTAAAAATATTTGGTTTGACCCCGTAA
PROTEIN sequence
Length: 121
MATICFYQDSHHDKPLYWIRKQLDIGYISKRNDNITELRINGFEQIGQILEELLPFLRFKKRQARKMIKCLNFLLVKGKNLGKQDCEKIIDYLQSVQNLNYRSHHKRTRKDLLKIFGLTP*