ggKbase home page

CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_1277_c

Search features with annotation key words

Displaying items 1-30 of 32 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_1277_c_1
CG_CPR17-01, CG_CPR17, Bacteria

Not on your lists

1092..2273
DNA (1182bp) protein (394aa)
elongation factor Tu (EC:2.7.7.4)
Elongation factor Tu bin=GWC1_CPR2_39_9 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=ACD58 tax=GWC1_CPR2_39_9 organism_group=CPR2 organism_desc=Good
Tax=CG_CPR17-01
CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_1277_c_2
CG_CPR17-01, CG_CPR17, Bacteria

Not on your lists


2299..2634
DNA (336bp) protein (112aa)
30S ribosomal protein S10 bin=GWC1_CPR2_39_9 species=Thermacetogenium phaeum genus=Thermacetogenium taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWC1_CPR2_39_9 organism_group=CPR2 organism_desc=Good
rpsJ; 30S ribosomal protein S10
Tax=CG_CPR17-01
CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_1277_c_3
CG_CPR17-01, CG_CPR17, Bacteria

Not on your lists

2819..3472
DNA (654bp) protein (218aa)
Tax=CG_CPR17-01
CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_1277_c_4
CG_CPR17-01, CG_CPR17, Bacteria

Not on your lists


3682..4308
DNA (627bp) protein (209aa)
50S ribosomal protein L3 bin=GWC1_CPR2_39_9 species=RAAC3_TM7 genus=RAAC3_TM7 taxon_order=RAAC3_TM7 taxon_class=RAAC3_TM7 phylum=TM7 tax=GWC1_CPR2_39_9 organism_group=CPR2 organism_desc=Good
50S ribosomal protein L3
Tax=CG_CPR17-01
CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_1277_c_5
CG_CPR17-01, CG_CPR17, Bacteria

Not on your lists


4310..5014
DNA (705bp) protein (235aa)
50S ribosomal protein L4 bin=GWC1_CPR2_39_9 species=Carboxydothermus hydrogenoformans genus=Carboxydothermus taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWC1_CPR2_39_9 organism_group=CPR2 organism_desc=Good
rplD; 50S ribosomal protein L4
Tax=CG_CPR17-01
CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_1277_c_6
CG_CPR17-01, CG_CPR17, Bacteria

Not on your lists


5014..5298
DNA (285bp) protein (95aa)
50S ribosomal protein L23 bin=GWC1_CPR2_39_9 species=Acidocella sp. MX-AZ02 genus=Acidocella taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC1_CPR2_39_9 organism_group=CPR2 organism_desc=Good
rplW; 50S ribosomal protein L23
Tax=CG_CPR17-01
CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_1277_c_7
CG_CPR17-01, CG_CPR17, Bacteria

Not on your lists


5301..6119
DNA (819bp) protein (273aa)
50S ribosomal protein L2 bin=GWC1_CPR2_39_9 species=Clostridium clariflavum genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC1_CPR2_39_9 organism_group=CPR2 organism_desc=Good
50S ribosomal protein L2
Tax=CG_CPR17-01
CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_1277_c_8
CG_CPR17-01, CG_CPR17, Bacteria

Not on your lists


6123..6398
DNA (276bp) protein (92aa)
30S ribosomal protein S19; K02965 small subunit ribosomal protein S19 bin=GWC1_CPR2_39_9 species=PERA2_38_36 genus=PERA2_38_36 taxon_order=PERA2_38_36 taxon_class=PERA2_38_36 phylum=PER tax=GWC1_CPR2_39_9 organism_group=CPR2 organism_desc=Good
30S ribosomal protein S19
Tax=CG_CPR17-01
CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_1277_c_9
CG_CPR17-01, CG_CPR17, Bacteria

Not on your lists


6404..6835
DNA (432bp) protein (144aa)
50S ribosomal protein L22 bin=GWC1_CPR2_39_9 species=Symbiobacterium thermophilum genus=Symbiobacterium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC1_CPR2_39_9 organism_group=CPR2 organism_desc=Good
rplV; LSU ribosomal protein L22p (L17e)
Tax=CG_CPR17-01
CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_1277_c_10
CG_CPR17-01, CG_CPR17, Bacteria

Not on your lists


6819..7475
DNA (657bp) protein (219aa)
30S ribosomal protein S3 bin=GWC1_CPR2_39_9 species=Heliobacterium modesticaldum genus=Heliobacterium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC1_CPR2_39_9 organism_group=CPR2 organism_desc=Good
rpsC; 30S ribosomal protein S3
Tax=CG_CPR17-01
CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_1277_c_11
CG_CPR17-01, CG_CPR17, Bacteria

Not on your lists


7498..7911
DNA (414bp) protein (138aa)
50S ribosomal protein L16 bin=GWC1_CPR2_39_9 species=Ktedonobacter racemifer genus=Ktedonobacter taxon_order=Ktedonobacterales taxon_class=Ktedonobacteria phylum=Chloroflexi tax=GWC1_CPR2_39_9 organism_group=CPR2 organism_desc=Good
50S ribosomal protein L16
Tax=CG_CPR17-01
CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_1277_c_12
CG_CPR17-01, CG_CPR17, Bacteria

Not on your lists


7915..8139
DNA (225bp) protein (75aa)
coiled-coil 11..32 bin=GWC1_CPR2_39_9 species=ACD12 genus=ACD12 taxon_order=ACD12 taxon_class=ACD12 phylum=OP11 tax=GWC1_CPR2_39_9 organism_group=CPR2 organism_desc=Good
50S ribosomal protein L29
Tax=CG_CPR17-01
CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_1277_c_13
CG_CPR17-01, CG_CPR17, Bacteria

Not on your lists


8129..8368
DNA (240bp) protein (80aa)
30S ribosomal protein S17 bin=GWC1_CPR2_39_9 species=Bulleidia extructa genus=Bulleidia taxon_order=Erysipelotrichales taxon_class=Erysipelotrichia phylum=Firmicutes tax=GWC1_CPR2_39_9 organism_group=CPR2 organism_desc=Good
rpsQ; 30S ribosomal protein S17
Tax=CG_CPR17-01
CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_1277_c_14
CG_CPR17-01, CG_CPR17, Bacteria

Not on your lists


8379..8747
DNA (369bp) protein (123aa)
50S ribosomal protein L14 bin=GWC1_CPR2_39_9 species=Atopobium minutum genus=Atopobium taxon_order=Coriobacteriales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC1_CPR2_39_9 organism_group=CPR2 organism_desc=Good
50S ribosomal protein L14
Tax=CG_CPR17-01
CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_1277_c_15
CG_CPR17-01, CG_CPR17, Bacteria

Not on your lists


8748..9053
DNA (306bp) protein (102aa)
Ribosomal protein L24 bin=GWC1_CPR2_39_9 species=human gut metagenome genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC1_CPR2_39_9 organism_group=CPR2 organism_desc=Good
50S ribosomal protein L24
Tax=CG_CPR17-01
CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_1277_c_16
CG_CPR17-01, CG_CPR17, Bacteria

Not on your lists


9053..9604
DNA (552bp) protein (184aa)
50S ribosomal protein L5 bin=GWC1_CPR2_39_9 species=Butyrivibrio proteoclasticus genus=Butyrivibrio taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC1_CPR2_39_9 organism_group=CPR2 organism_desc=Good
rplE; 50S ribosomal protein L5
Tax=CG_CPR17-01
CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_1277_c_17
GWC2_CPR2_39_10, CPR2, Bacteria

Not on your lists


9607..9792
DNA (186bp) protein (62aa)
30S ribosomal protein S14 type Z bin=GWC1_CPR2_39_9 species=Thermobaculum terrenum genus=Thermobaculum taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC1_CPR2_39_9 organism_group=CPR2 organism_desc=Good
30S ribosomal protein S14 type Z {ECO:0000313|EMBL:KKQ94612.1}; species="Bacteria; candidate division CPR2.;" source="candidate division CPR2 bacterium GW2011_GWC2_39_10.;"
30S ribosomal protein S14
CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_1277_c_18
CG_CPR17-01, CG_CPR17, Bacteria

Not on your lists


9819..10220
DNA (402bp) protein (134aa)
30S ribosomal protein S8 bin=GWC1_CPR2_39_9 species=Anaerolinea thermophila genus=Anaerolinea taxon_order=Anaerolineales taxon_class=Anaerolineae phylum=Chloroflexi tax=GWC1_CPR2_39_9 organism_group=CPR2 organism_desc=Good
rpsH; 30S ribosomal protein S8
Tax=CG_CPR17-01
CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_1277_c_19
CG_CPR17-01, CG_CPR17, Bacteria

Not on your lists


10297..10836
DNA (540bp) protein (180aa)
50S ribosomal protein L6 bin=GWC1_CPR2_39_9 species=unknown genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC1_CPR2_39_9 organism_group=CPR2 organism_desc=Good
LSU ribosomal protein L6P
Tax=CG_CPR17-01
CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_1277_c_20
CG_CPR17-01, CG_CPR17, Bacteria

Not on your lists


10839..11183
DNA (345bp) protein (115aa)
50S ribosomal protein L18 bin=GWC1_CPR2_39_9 species=Catenibacterium mitsuokai genus=Catenibacterium taxon_order=Erysipelotrichales taxon_class=Erysipelotrichia phylum=Firmicutes tax=GWC1_CPR2_39_9 organism_group=CPR2 organism_desc=Good
rplR; ribosomal protein L18
Tax=CG_CPR17-01
CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_1277_c_21
CG_CPR17-01, CG_CPR17, Bacteria

Not on your lists


11193..11870
DNA (678bp) protein (226aa)
ribosomal protein S5 bin=GWC1_CPR2_39_9 species=ACD57 genus=ACD57 taxon_order=ACD57 taxon_class=ACD57 phylum=OP11 tax=GWC1_CPR2_39_9 organism_group=CPR2 organism_desc=Good
rpsE; 30S ribosomal protein S5
Tax=CG_CPR17-01
CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_1277_c_22
CG_CPR17-01, CG_CPR17, Bacteria

Not on your lists


11870..12304
DNA (435bp) protein (145aa)
50S ribosomal protein L15 bin=GWC2_CPR2_39_35 species=Bacillus selenitireducens genus=Bacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWC2_CPR2_39_35 organism_group=CPR2 organism_desc=Candidate for curation
50S ribosomal protein L15
Tax=CG_CPR17-01
CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_1277_c_23
CG_CPR17-01, CG_CPR17, Bacteria

Not on your lists


12513..13829
DNA (1317bp) protein (439aa)
ttr:Tter_0735 preprotein translocase, SecY subunit; K03076 preprotein translocase subunit SecY bin=GWC1_CPR2_39_9 species=ACD1 genus=ACD1 taxon_order=ACD1 taxon_class=ACD1 phylum=OD1-i tax=GWC1_CPR2_39_9 organism_group=CPR2 organism_desc=Good
secY; preprotein translocase subunit SecY
Tax=CG_CPR17-01
CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_1277_c_24
CG_CPR17-01, CG_CPR17, Bacteria

Not on your lists

13909..14130
DNA (222bp) protein (74aa)
Translation initiation factor IF-1 bin=GWC1_CPR2_39_9 species=unknown genus=Leptospirillum taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWC1_CPR2_39_9 organism_group=CPR2 organism_desc=Good
translation initiation factor 1
Tax=CG_CPR17-01
CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_1277_c_25
CG_CPR17-01, CG_CPR17, Bacteria

Not on your lists


14396..14782
DNA (387bp) protein (129aa)
30S ribosomal protein S13 bin=GWC1_CPR2_39_9 species=Ktedonobacter racemifer genus=Ktedonobacter taxon_order=Ktedonobacterales taxon_class=Ktedonobacteria phylum=Chloroflexi tax=GWC1_CPR2_39_9 organism_group=CPR2 organism_desc=Good
30S ribosomal protein S13
Tax=CG_CPR17-01
CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_1277_c_26
CG_CPR17-01, CG_CPR17, Bacteria

Not on your lists


14810..15202
DNA (393bp) protein (131aa)
30S ribosomal protein S11 bin=GWC1_CPR2_39_9 species=Dehalococcoides mccartyi genus=Dehalococcoides taxon_order=Dehalococcoidales taxon_class=Dehalococcoidia phylum=Chloroflexi tax=GWC1_CPR2_39_9 organism_group=CPR2 organism_desc=Good
30S ribosomal protein S11
Tax=CG_CPR17-01
CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_1277_c_27
CG_CPR17-01, CG_CPR17, Bacteria

Not on your lists


15202..15834
DNA (633bp) protein (211aa)
30S ribosomal protein S4 bin=GWC1_CPR2_39_9 species=Moorella thermoacetica genus=Moorella taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWC1_CPR2_39_9 organism_group=CPR2 organism_desc=Good
rpsD; 30S ribosomal protein S4
Tax=CG_CPR17-01
CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_1277_c_28
CG_CPR17-01, CG_CPR17, Bacteria

Not on your lists

15855..16805
DNA (951bp) protein (317aa)
DNA-directed RNA polymerase, alpha subunit; K03040 DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] bin=GWC1_CPR2_39_9 species=ACD63 genus=ACD63 taxon_order=ACD63 taxon_class=ACD63 phylum=OD1 tax=GWC1_CPR2_39_9 organism_group=CPR2 organism_desc=Good
rpoA; DNA-directed RNA polymerase subunit alpha (EC:2.7.7.6)
Tax=CG_CPR17-01
CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_1277_c_29
CG_CPR17-01, CG_CPR17, Bacteria

Not on your lists


16807..17298
DNA (492bp) protein (164aa)
50S ribosomal protein L17 bin=GWC1_CPR2_39_9 species=Nitrospina gracilis genus=Nitrospina taxon_order=Nitrospinales taxon_class=Nitrospinia phylum=Nitrospinae tax=GWC1_CPR2_39_9 organism_group=CPR2 organism_desc=Good
50S ribosomal protein L17
Tax=CG_CPR17-01
CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_1277_c_30
CG_CPR17-01, CG_CPR17, Bacteria

Not on your lists


17295..17720
DNA (426bp) protein (142aa)
50S ribosomal protein L13; K02871 large subunit ribosomal protein L13 bin=GWC1_CPR2_39_9 species=MEL_C1 genus=MEL_C1 taxon_order=MEL_C1 taxon_class=MEL_C1 phylum=Melainabacteria tax=GWC1_CPR2_39_9 organism_group=CPR2 organism_desc=Good
rplM; 50S ribosomal protein L13
Tax=CG_CPR17-01
Displaying items 1-30 of 32 in total

View Taxonomy