ggKbase home page

CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_5381_c

Search features with annotation key words

Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_5381_c_1
unknown

Not on your lists

comp(1..441)
DNA (441bp) protein (147aa)

This feature has no annotations

CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_5381_c_2
GWA2_OD1_45_13, Jorgensenbacteria, Parcubacteria, Bacteria

Not on your lists

comp(425..1201)
DNA (777bp) protein (259aa)
Uncharacterized protein {ECO:0000313|EMBL:KKT90344.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria (Jorgensenbacteria) bacterium GW2011_GWA2_45_13.;"
CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_5381_c_3
unknown

Not on your lists

comp(1297..1674)
DNA (378bp) protein (126aa)

This feature has no annotations

CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_5381_c_4
GWB1_OD1_45_9, Parcubacteria, Bacteria

Not on your lists


comp(1677..2597)
DNA (921bp) protein (307aa)
Dimethyladenosine transferase Tax=uncultured bacterium RepID=K1YFS8_9BACT
Ribosomal RNA small subunit methyltransferase A {ECO:0000313|EMBL:KKU15080.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWB1_45_9.;"
rsmA; ribosomal RNA small subunit methyltransferase A
CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_5381_c_5
GWB1_OD1_49_9, Jorgensenbacteria, Parcubacteria, Bacteria

Not on your lists

comp(2675..4216)
DNA (1542bp) protein (514aa)
Competence protein ComM {ECO:0000313|EMBL:KKW12078.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria (Jorgensenbacteria) bacterium GW2011_GWB1_49_9.;"
Putative chaperone; K07391 magnesium chelatase family protein bin=GWB1_SUB10_ACD81 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWB1_SUB10_ACD81 organism_group=OD1 (Parcubacteria) organism_desc=Complete
Mg chelatase-like protein
CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_5381_c_6

Not on your lists

comp(4394..4738)
DNA (345bp) protein (115aa)
hypothetical protein Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI00036F3155
Transcriptional regulator, TraR/DksA family {ECO:0000313|EMBL:KKS88064.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC1_43_11.;"
TraR/DksA family transcriptional regulator
CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_5381_c_7
GWA2_OD1_45_13, Jorgensenbacteria, Parcubacteria, Bacteria

Not on your lists

comp(4922..6064)
DNA (1143bp) protein (381aa)
Uncharacterized protein {ECO:0000313|EMBL:KKT90337.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria (Jorgensenbacteria) bacterium GW2011_GWA2_45_13.;"
CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_5381_c_8
GWB1_OD1_49_9, Jorgensenbacteria, Parcubacteria, Bacteria

Not on your lists

comp(6410..8458)
DNA (2049bp) protein (683aa)
gwc:GWCH70_1161 polynucleotide phosphorylase/polyadenylase; K00962 polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] bin=ACD81 species=ACD81 genus=ACD81 taxon_order=ACD81 taxon_class=ACD81 phylum=OD1 tax=ACD81 organism_group=OD1 (Parcubacteria) organism_desc=OD1
polyribonucleotide nucleotidyltransferase (EC:2.7.7.8)
Polyribonucleotide nucleotidyltransferase {ECO:0000313|EMBL:KKW12084.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria (Jorgensenbacteria) bacterium GW2011_GWB1_49_9.;"
CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_5381_c_9
GWB1_OD1_49_9, Jorgensenbacteria, Parcubacteria, Bacteria

Not on your lists

comp(8492..9025)
DNA (534bp) protein (178aa)
Uncharacterized protein {ECO:0000313|EMBL:KKW12085.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria (Jorgensenbacteria) bacterium GW2011_GWB1_49_9.;"
conserved hypothetical protein (DUF88) bin=GWB1_SUB10_ACD81 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWB1_SUB10_ACD81 organism_group=OD1 (Parcubacteria) organism_desc=Complete
hypothetical protein
CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_5381_c_10
GWA1_OD1_48_11, Jorgensenbacteria, Parcubacteria, Bacteria

Not on your lists


comp(9033..9302)
DNA (270bp) protein (90aa)
30S ribosomal protein S15 {ECO:0000313|EMBL:KKU91593.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria (Jorgensenbacteria) bacterium GW2011_GWA1_48_11.;"
rpsO; 30S ribosomal protein S15; K02956 small subunit ribosomal protein S15 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
rpsO; 30S ribosomal protein S15
CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_5381_c_11
GWB1_OD1_49_9, Jorgensenbacteria, Parcubacteria, Bacteria

Not on your lists

9556..10566
DNA (1011bp) protein (337aa)
Tyrosine recombinase XerC {ECO:0000313|EMBL:KKW12087.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria (Jorgensenbacteria) bacterium GW2011_GWB1_49_9.;"
putative Tyrosine recombinase xerD bin=GWB1_SUB10_ACD81 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWB1_SUB10_ACD81 organism_group=OD1 (Parcubacteria) organism_desc=Complete
putative Tyrosine recombinase xerD
CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_5381_c_trna_1
unknown

Not on your lists

comp(11069..11152)
DNA (84bp)
transferRNA Leu
CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_5381_c_12
RBG_13_RIF_OD1_08_41_18_curated, RIF-OD1-8, Parcubacteria, Bacteria

Not on your lists

11272..12399
DNA (1128bp) protein (376aa)
transmembrane_regions bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
Tax=RBG_13_RIF_OD1_08_41_18_curated
CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_5381_c_13
unknown

Not on your lists

12380..12823
DNA (444bp) protein (148aa)

This feature has no annotations

CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_5381_c_14
GWA2_OD1_45_13, Jorgensenbacteria, Parcubacteria, Bacteria

Not on your lists

comp(12887..13249)
DNA (363bp) protein (121aa)
Uncharacterized protein {ECO:0000313|EMBL:KKT91960.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria (Jorgensenbacteria) bacterium GW2011_GWA2_45_13.;"
Putative uncharacterized protein bin=GWB1_SUB10_ACD81 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWB1_SUB10_ACD81 organism_group=OD1 (Parcubacteria) organism_desc=Complete
hypothetical protein
CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_5381_c_15
GWA2_OD1_45_13, Jorgensenbacteria, Parcubacteria, Bacteria

Not on your lists

comp(13265..13639)
DNA (375bp) protein (125aa)
Uncharacterized protein {ECO:0000313|EMBL:KKT91961.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria (Jorgensenbacteria) bacterium GW2011_GWA2_45_13.;"
Putative uncharacterized protein bin=GWB1_SUB10_ACD81 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWB1_SUB10_ACD81 organism_group=OD1 (Parcubacteria) organism_desc=Complete
CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_5381_c_16
GWA2_OD1_45_13, Jorgensenbacteria, Parcubacteria, Bacteria

Not on your lists

comp(13743..14096)
DNA (354bp) protein (118aa)
Uncharacterized protein {ECO:0000313|EMBL:KKT91962.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria (Jorgensenbacteria) bacterium GW2011_GWA2_45_13.;"
Putative uncharacterized protein bin=GWB1_SUB10_ACD81 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWB1_SUB10_ACD81 organism_group=OD1 (Parcubacteria) organism_desc=Complete
hypothetical protein
CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_5381_c_17
GWA2_OD1_45_13, Jorgensenbacteria, Parcubacteria, Bacteria

Not on your lists

comp(14206..14583)
DNA (378bp) protein (126aa)
Uncharacterized protein Tax=uncultured bacterium RepID=K1YFN3_9BACT
Uncharacterized protein {ECO:0000313|EMBL:KKT91963.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria (Jorgensenbacteria) bacterium GW2011_GWA2_45_13.;"
CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_5381_c_18
GWB1_OD1_49_9, Jorgensenbacteria, Parcubacteria, Bacteria

Not on your lists

comp(14606..14965)
DNA (360bp) protein (120aa)
Uncharacterized protein {ECO:0000313|EMBL:KKW12093.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria (Jorgensenbacteria) bacterium GW2011_GWB1_49_9.;"
PKD domain-containing protein bin=PER_GWE2_39_6 species=PER_GWF2_39_17 genus=PER_GWF2_39_17 taxon_order=PER_GWF2_39_17 taxon_class=PER_GWF2_39_17 phylum=PER tax=PER_GWE2_39_6 organism_group=PER (Peregrinibacteria)
Displaying 19 items

View Taxonomy