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CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_4530_c

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_4530_c_1
GWC1_OD1_48_8_partial, Jorgensenbacteria, Parcubacteria, Bacteria

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comp(326..1201)
DNA (876bp) protein (292aa)
Internalization-related competence protein ComEC/Rec2 protein {ECO:0000313|EMBL:KKU99091.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria (Jorgensenbacteria) bacterium GW2011_GWC1_48_8.;"
DNA internalization-related competence protein ComEC/Rec2 bin=GWB1_SUB10_ACD81 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWB1_SUB10_ACD81 organism_group=OD1 (Parcubacteria) organism_desc=Complete
competence protein ComEC
CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_4530_c_2
GWC1_OD1_48_8_partial, Jorgensenbacteria, Parcubacteria, Bacteria

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comp(1164..2738)
DNA (1575bp) protein (525aa)
Internalization-related competence protein ComEC/Rec2 protein {ECO:0000313|EMBL:KKU99092.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria (Jorgensenbacteria) bacterium GW2011_GWC1_48_8.;"
ComEC/Rec2-like protein; K02238 competence protein ComEC bin=GWB1_SUB10_ACD81 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWB1_SUB10_ACD81 organism_group=OD1 (Parcubacteria) organism_desc=Complete
DNA internalization-related competence protein ComEC/Rec2
CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_4530_c_3
GWA1_OD1_49_17_curated, Parcubacteria, Bacteria

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comp(2996..4771)
DNA (1776bp) protein (592aa)
Alanine--tRNA ligase bin=GWA1_ZB2_49_26 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWA1_ZB2_49_26 organism_group=ZB2 organism_desc=Good
alanyl-tRNA synthetase
Tax=GWA1_OD1_49_17_curated
CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_4530_c_4
GWB1_OD1_49_9, Jorgensenbacteria, Parcubacteria, Bacteria

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comp(5022..6290)
DNA (1269bp) protein (423aa)
RNA polymerase sigma factor {ECO:0000313|EMBL:KKW11859.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria (Jorgensenbacteria) bacterium GW2011_GWB1_49_9.;"
cow:Calow_0582 RNA polymerase, sigma 70 subunit, RpoD subfamily; K03086 RNA polymerase primary sigma factor bin=ACD81 species=ACD81 genus=ACD81 taxon_order=ACD81 taxon_class=ACD81 phylum=OD1 tax=ACD81 organism_group=OD1 (Parcubacteria) organism_desc=OD1
RpoD subfamily RNA polymerase sigma-70 subunit
CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_4530_c_5
GWA1_OD1_48_11, Jorgensenbacteria, Parcubacteria, Bacteria

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comp(6336..8102)
DNA (1767bp) protein (589aa)
gmc:GY4MC1_1083 DNA primase; K02316 DNA primase [EC:2.7.7.-] bin=ACD81 species=ACD81 genus=ACD81 taxon_order=ACD81 taxon_class=ACD81 phylum=OD1 tax=ACD81 organism_group=OD1 (Parcubacteria) organism_desc=OD1
Primase protein {ECO:0000313|EMBL:KKU91184.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria (Jorgensenbacteria) bacterium GW2011_GWA1_48_11.;"
DNA primase
CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_4530_c_6
CG_Falkow_01, Falkowbacteria, Parcubacteria, Bacteria

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8300..9580
DNA (1281bp) protein (427aa)
Natural resistance-associated macrophage protein Tax=Mucilaginibacter paludis DSM 18603 RepID=H1YAR4_9SPHI
NRAMP family Mn2+/Fe2+ transporter
Tax=CG_Falkow_01
CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_4530_c_7
unknown

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comp(9597..9944)
DNA (348bp) protein (116aa)

This feature has no annotations

CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_4530_c_8
R_OD1_57_28, Parcubacteria, Bacteria

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comp(10019..10222)
DNA (204bp) protein (68aa)
Putative uncharacterized protein bin=GWC2_OD1_43_27 species=Candidatus Micrarchaeum acidiphilum genus=Candidatus Micrarchaeum taxon_order=unknown taxon_class=unknown phylum=Euryarchaeota tax=GWC2_OD1_43_27 organism_group=OD1 (Parcubacteria) organism_desc=Same as C1_43_61 and D1_43_18 Curated this version (complete)
hypothetical protein
Tax=RIFCSPHIGHO2_01_FULL_OD1_57_28_curated
CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_4530_c_9
GWA1_OD1_48_11, Jorgensenbacteria, Parcubacteria, Bacteria

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comp(10219..10680)
DNA (462bp) protein (154aa)
FKBP-type peptidyl-prolyl cis-trans isomerase (EC:5.2.1.8); K01802 peptidylprolyl isomerase [EC:5.2.1.8] bin=ACD50 species=ACD50 genus=ACD50 taxon_order=ACD50 taxon_class=ACD50 phylum=OP11 tax=ACD50 organism_group=OP11 (Microgenomates) organism_desc=OP11
Peptidyl-prolyl cis-trans isomerase {ECO:0000313|EMBL:KKU91185.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria (Jorgensenbacteria) bacterium GW2011_GWA1_48_11.;"
fkpA; FKBP-type peptidyl-prolyl cis-trans isomerase
CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_4530_c_trna_1
unknown

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comp(10689..10771)
DNA (83bp)
transferRNA Pseudo
CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_4530_c_10
RHI_OD1_Wolfebacteria_48_16, Wolfebacteria, Parcubacteria, Bacteria

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10921..11490
DNA (570bp) protein (190aa)
ORF13 bin=GWC2_OD1_43_27 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=ACD58 tax=GWC2_OD1_43_27 organism_group=OD1 (Parcubacteria) organism_desc=Same as C1_43_61 and D1_43_18 Curated this version (complete)
paaX; repressor in ring oxydation complex/phenylacetic acid degradation pathway-like protein (paaX)
Tax=RIFCSPHIGHO2_12_FULL_OD1_Wolfebacteria_48_16_curated
CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_4530_c_11

Not on your lists

comp(11627..12562)
DNA (936bp) protein (312aa)
Uncharacterized protein {ECO:0000313|EMBL:KKU68501.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_47_16.;"
hypothetical protein; K06872 uncharacterized protein bin=GWC2_PER_33_13 species=PER_GWC2_33_13 genus=PER_GWC2_33_13 taxon_order=PER_GWC2_33_13 taxon_class=PER_GWC2_33_13 phylum=PER tax=GWC2_PER_33_13 organism_group=PER (Peregrinibacteria) organism_desc=No RuBisCO in this genome
hypothetical protein
CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_4530_c_12
GWA1_OD1_48_11, Jorgensenbacteria, Parcubacteria, Bacteria

Not on your lists

comp(12664..13218)
DNA (555bp) protein (185aa)
LemA protein {ECO:0000313|EMBL:KKU91194.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria (Jorgensenbacteria) bacterium GW2011_GWA1_48_11.;"
lema protein; K03744 LemA protein bin=GWC2_PER_33_13 species=PER_GWC2_33_13 genus=PER_GWC2_33_13 taxon_order=PER_GWC2_33_13 taxon_class=PER_GWC2_33_13 phylum=PER tax=GWC2_PER_33_13 organism_group=PER (Peregrinibacteria) organism_desc=No RuBisCO in this genome
LemA family protein
Displaying 13 items

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