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CG_4_10_14_0.2_scaffold_1144_c

Search features with annotation key words

Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
CG_4_10_14_0.2_scaffold_1144_c_1
unknown

Not on your lists

comp(2..67)
DNA (66bp) protein (22aa)

This feature has no annotations

CG_4_10_14_0.2_scaffold_1144_c_2
R_RIF_OD1_06_38_12, RIF-OD1-6, Parcubacteria, Bacteria

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comp(64..1287)
DNA (1224bp) protein (408aa)
3-phosphoshikimate 1-carboxyvinyltransferase (EC:2.5.1.19)
3-phosphoshikimate 1-carboxyvinyltransferase bin=GWA2_OP3_52_12 species=Nitrospina gracilis genus=Nitrospina taxon_order=Nitrospinales taxon_class=Nitrospinia phylum=Nitrospinae tax=GWA2_OP3_52_12 organism_group=OP3 (Omnitrophica) organism_desc=Genome is FULL of scaffolding errors
Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_06_38_12_curated
CG_4_10_14_0.2_scaffold_1144_c_3
R_RIF_OD1_06_38_12, RIF-OD1-6, Parcubacteria, Bacteria

Not on your lists

comp(1284..2381)
DNA (1098bp) protein (366aa)
3-dehydroquinate synthase (EC:4.2.3.4)
3-dehydroquinate synthase Tax=Pedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 / LMG 10337 / NBRC 100064 / NCIMB 13643) RepID=F0SD13_PEDSD
Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_06_38_12_curated
CG_4_10_14_0.2_scaffold_1144_c_4
R_RIF_OD1_06_38_12, RIF-OD1-6, Parcubacteria, Bacteria

Not on your lists

comp(2378..3202)
DNA (825bp) protein (275aa)
prephenate dehydratase (EC:4.2.1.51)
Prephenate dehydratase Tax=Blattabacterium sp. (Blatta orientalis) str. Tarazona RepID=L7YC41_9FLAO
Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_06_38_12_curated
CG_4_10_14_0.2_scaffold_1144_c_5
R_RIF_OD1_06_38_12, RIF-OD1-6, Parcubacteria, Bacteria

Not on your lists

comp(3199..3933)
DNA (735bp) protein (245aa)
Arogenate dehydrogenase (NADP(+)) (EC:1.3.1.78)
Prephenate dehydrogenase Tax=delta proteobacterium NaphS2 RepID=D8EW30_9DELT
Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_06_38_12_curated
CG_4_10_14_0.2_scaffold_1144_c_6
R_RIF_OD1_06_38_12, RIF-OD1-6, Parcubacteria, Bacteria

Not on your lists

comp(3930..4196)
DNA (267bp) protein (89aa)
3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase bin=GWE2_Bacteroidetes_29_8 species=Solitalea canadensis genus=Solitalea taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_29_8 organism_group=Bacteroidetes organism_desc=Good
3-deoxy-D-arabinoheptulosonate-7-phosphate synthase
Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_06_38_12_curated
CG_4_10_14_0.2_scaffold_1144_c_7
R_RIF_OD1_06_38_12, RIF-OD1-6, Parcubacteria, Bacteria

Not on your lists

comp(4257..5201)
DNA (945bp) protein (315aa)
Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_06_38_12_curated
CG_4_10_14_0.2_scaffold_1144_c_8
R_RIF_OD1_06_38_12, RIF-OD1-6, Parcubacteria, Bacteria

Not on your lists

comp(5415..6722)
DNA (1308bp) protein (436aa)
seg 385..399 bin=ACD12 species=ACD12 genus=ACD12 taxon_order=ACD12 taxon_class=ACD12 phylum=OP11 tax=ACD12 organism_group=OP11 (Microgenomates) organism_desc= OP11
large repetitive protein
Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_06_38_12_curated
CG_4_10_14_0.2_scaffold_1144_c_9
GWA2_OP11_37_7, Roizmanbacteria, Microgenomates, Bacteria

Not on your lists

comp(6783..6908)
DNA (126bp) protein (42aa)
Uncharacterized protein {ECO:0000313|EMBL:KKQ38354.1}; species="Bacteria; Microgenomates.;" source="Microgenomates (Roizmanbacteria) bacterium GW2011_GWA2_37_7.;"
CG_4_10_14_0.2_scaffold_1144_c_10
GWA2_OP11_37_7, Roizmanbacteria, Microgenomates, Bacteria

Not on your lists

comp(6905..7615)
DNA (711bp) protein (237aa)
Uncharacterized protein {ECO:0000313|EMBL:KKQ38353.1}; species="Bacteria; Microgenomates.;" source="Microgenomates (Roizmanbacteria) bacterium GW2011_GWA2_37_7.;"
coiled-coil 64..95 bin=ACD57 species=ACD57 genus=ACD57 taxon_order=ACD57 taxon_class=ACD57 phylum=OP11 tax=ACD57 organism_group=OP11 (Microgenomates) organism_desc=OP11
CG_4_10_14_0.2_scaffold_1144_c_11
GWA2_OP11_37_7, Roizmanbacteria, Microgenomates, Bacteria

Not on your lists

comp(7612..8142)
DNA (531bp) protein (177aa)
Uncharacterized protein {ECO:0000313|EMBL:KKQ38352.1}; species="Bacteria; Microgenomates.;" source="Microgenomates (Roizmanbacteria) bacterium GW2011_GWA2_37_7.;"
transmembrane_regions 21..43 bin=ACD12 species=ACD12 genus=ACD12 taxon_order=ACD12 taxon_class=ACD12 phylum=OP11 tax=ACD12 organism_group=OP11 (Microgenomates) organism_desc= OP11
CG_4_10_14_0.2_scaffold_1144_c_12
GWA2_OP11_37_7, Roizmanbacteria, Microgenomates, Bacteria

Not on your lists


comp(8148..8390)
DNA (243bp) protein (81aa)
30S ribosomal protein S20 {ECO:0000313|EMBL:KKQ38351.1}; species="Bacteria; Microgenomates.;" source="Microgenomates (Roizmanbacteria) bacterium GW2011_GWA2_37_7.;"
30S ribosomal protein S20
30S ribosomal protein S20 bin=RBG1 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=RBG1 organism_group=Zixibacteria
CG_4_10_14_0.2_scaffold_1144_c_13
R_RIF_OD1_06_38_12, RIF-OD1-6, Parcubacteria, Bacteria

Not on your lists

comp(8526..8996)
DNA (471bp) protein (157aa)
Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_06_38_12_curated
CG_4_10_14_0.2_scaffold_1144_c_14
GWA2_OP11_37_7, Roizmanbacteria, Microgenomates, Bacteria

Not on your lists


comp(9021..10394)
DNA (1374bp) protein (458aa)
Glycine--tRNA ligase Tax=cellular organisms RepID=SYG_LEPBJ bin=OP11_3 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=OP11_3 organism_group=OP11 (Microgenomates) organism_desc=Complete genome
Glycine-tRNA ligase {ECO:0000313|EMBL:KKQ38349.1}; species="Bacteria; Microgenomates.;" source="Microgenomates (Roizmanbacteria) bacterium GW2011_GWA2_37_7.;"
hypothetical protein
CG_4_10_14_0.2_scaffold_1144_c_15
GWA2_OP11_37_7, Roizmanbacteria, Microgenomates, Bacteria

Not on your lists

comp(10399..10923)
DNA (525bp) protein (175aa)
Repair protein RecO protein {ECO:0000313|EMBL:KKQ38348.1}; species="Bacteria; Microgenomates.;" source="Microgenomates (Roizmanbacteria) bacterium GW2011_GWA2_37_7.;"
recO; recombinational DNA repair protein; K03584 DNA repair protein RecO (recombination protein O) bin=ACD12 species=ACD12 genus=ACD12 taxon_order=ACD12 taxon_class=ACD12 phylum=OP11 tax=ACD12 organism_group=OP11 (Microgenomates) organism_desc= OP11
DNA repair protein RecO
CG_4_10_14_0.2_scaffold_1144_c_16
GWA2_OP11_37_7, Roizmanbacteria, Microgenomates, Bacteria

Not on your lists

comp(10936..12846)
DNA (1911bp) protein (637aa)
Putative uncharacterized protein Tax=Frankia sp. EUN1f RepID=D3D3P2_9ACTO bin=ACD12 species=Frankia sp. EUN1f genus=Frankia taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=ACD12 organism_group=OP11 (Microgenomates) organism_desc= OP11
Uncharacterized protein {ECO:0000313|EMBL:KKQ38347.1}; species="Bacteria; Microgenomates.;" source="Microgenomates (Roizmanbacteria) bacterium GW2011_GWA2_37_7.;"
hypothetical protein
CG_4_10_14_0.2_scaffold_1144_c_17
R_OP11_Roizmanbacteria_41_22, Roizmannbacteria, Microgenomates, Bacteria

Not on your lists

comp(12900..13568)
DNA (669bp) protein (223aa)
undecaprenyl-phosphate galactose phosphotransferase (EC:2.7.8.6)
Undecaprenyl-phosphate galactose phosphotransferase Tax=uncultured bacterium RepID=K2EXV3_9BACT
Tax=RIFCSPLOWO2_01_FULL_OP11_Roizmanbacteria_41_22_curated
CG_4_10_14_0.2_scaffold_1144_c_18
GWA2_OP11_37_7, Roizmanbacteria, Microgenomates, Bacteria

Not on your lists

comp(13602..14687)
DNA (1086bp) protein (362aa)
Uncharacterized protein Tax=uncultured bacterium RepID=K2F107_9BACT
Mannose-1-phosphate guanylyltransferase (GDP) {ECO:0000313|EMBL:KKQ38345.1}; species="Bacteria; Microgenomates.;" source="Microgenomates (Roizmanbacteria) bacterium GW2011_GWA2_37_7.;"
mannose-1-phosphate guanylyltransferase
CG_4_10_14_0.2_scaffold_1144_c_19
GWA2_OP11_37_7, Roizmanbacteria, Microgenomates, Bacteria

Not on your lists

comp(14684..15883)
DNA (1200bp) protein (400aa)
Glycosyl transferase group 1 {ECO:0000313|EMBL:KKQ38344.1}; species="Bacteria; Microgenomates.;" source="Microgenomates (Roizmanbacteria) bacterium GW2011_GWA2_37_7.;"
glycosyl transferase group 1 bin=ACD12 species=ACD12 genus=ACD12 taxon_order=ACD12 taxon_class=ACD12 phylum=OP11 tax=ACD12 organism_group=OP11 (Microgenomates) organism_desc= OP11
glycosyl transferase group 1
CG_4_10_14_0.2_scaffold_1144_c_20
unknown

Not on your lists

16642..17199
DNA (558bp) protein (186aa)

This feature has no annotations

CG_4_10_14_0.2_scaffold_1144_c_21
RBG_13_RIF_OD1_08_40_8_curated, RIF-OD1-8, Parcubacteria, Bacteria

Not on your lists

17674..18015
DNA (342bp) protein (114aa)
Tax=RBG_13_RIF_OD1_08_40_8_curated
CG_4_10_14_0.2_scaffold_1144_c_22
RIFOXYC2_FULL_OP11_Curtissbacteria_41_11_curated, Curtissbacteria, Microgenomates, Bacteria

Not on your lists

18079..18756
DNA (678bp) protein (226aa)
transmembrane_regions 84..106 bin=ACD22 species=ACD22 genus=ACD22 taxon_order=ACD22 taxon_class=ACD22 phylum=WWE3 tax=ACD22 organism_group=WWE3 organism_desc=WWE3
Tax=RIFOXYC2_FULL_OP11_Curtissbacteria_41_11_curated
CG_4_10_14_0.2_scaffold_1144_c_23
unknown

Not on your lists

comp(18901..19470)
DNA (570bp) protein (190aa)

This feature has no annotations

Displaying 23 items

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