ggKbase home page

CG_4_10_14_0.2_scaffold_193_c_17

Organism: CG_4_10_14_0_2_um_filter_Roizmanbacteria_OP11_36_9_curated

near complete RP 48 / 55 MC: 4 BSCG 45 / 51 ASCG 9 / 38
Location: comp(19882..20541)

Top 3 Functional Annotations

Value Algorithm Source
transmembrane_regions 175..197 bin=ACD12 species=ACD12 genus=ACD12 taxon_order=ACD12 taxon_class=ACD12 phylum=OP11 tax=ACD12 organism_group=OP11 (Microgenomates) organism_desc= OP11 similarity UNIREF
DB: UNIREF100
  • Identity: 45.7
  • Coverage: 221.0
  • Bit_score: 187
  • Evalue 9.40e-45
Tax=RIFCSPLOWO2_01_FULL_OP11_Roizmanbacteria_41_22_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 53.0
  • Coverage: 219.0
  • Bit_score: 233
  • Evalue 2.10e-58

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

R_OP11_Roizmanbacteria_41_22 → Roizmannbacteria → Microgenomates → Bacteria

Sequences

DNA sequence
Length: 660
ATGAATAATACTGCAAATTCTACTCAGAAAATGCTAAATTACTGGGCAATATCTCTTATATTTTGGGCTTGTTTTAGAGCTTACTTCGGAACAAATCTTCCTATTTGGCTTGATGAATTAGTAGCAAAGCCAGTAATTTTTCTAACTCCTGTAGCATTCTATATTTCAAAATACGAAAAGGAAGGTTTTTTAAAGGCAGTTGACCTAGTTACGAATAAAATGAAATCGTCAATAACTTTTGGAATGATTGTGGGAGGATTTTTTTTCTTAACTGGAATGACAGTTCAATTTATTGAAACTGGAGGATTGATTTTTTCTGAGTTTGGGGGATTTATATCATTTCTAATGATTATTATAATTTCATTTGGGTCGAGTATTTCTGAAGAAATTCTATCAAGAGGATTTGTTCTAAAAAGATTATTCAAAGAATCTGGAAACGTGTGGTCTTCAGTATTTTTTGCGAGTTTATTATTTTTCTTTTTACATATTCCTATTCTCTTTTCAAACCCAGACATTCATGGTCCGTTATTAATCCAAGTTATGATTACTGATTTTCTATTGAGCTTTACAGTTTCATTCATGTACCTCCAGAAAAAGAATTTAATGGTACCCATCATTATTCACGCTTTTTATAACTTGAGCCTATACCTTTTCATTTAA
PROTEIN sequence
Length: 220
MNNTANSTQKMLNYWAISLIFWACFRAYFGTNLPIWLDELVAKPVIFLTPVAFYISKYEKEGFLKAVDLVTNKMKSSITFGMIVGGFFFLTGMTVQFIETGGLIFSEFGGFISFLMIIIISFGSSISEEILSRGFVLKRLFKESGNVWSSVFFASLLFFFLHIPILFSNPDIHGPLLIQVMITDFLLSFTVSFMYLQKKNLMVPIIIHAFYNLSLYLFI*