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CG_4_10_14_0.2_scaffold_193_c_18

Organism: CG_4_10_14_0_2_um_filter_Roizmanbacteria_OP11_36_9_curated

near complete RP 48 / 55 MC: 4 BSCG 45 / 51 ASCG 9 / 38
Location: comp(20593..21681)

Top 3 Functional Annotations

Value Algorithm Source
tjr:TherJR_2302 RNA polymerase, sigma 70 subunit, RpoD subfamily; K03086 RNA polymerase primary sigma factor bin=ACD12 species=ACD12 genus=ACD12 taxon_order=ACD12 taxon_class=ACD12 phylum=OP11 tax=ACD12 organism_group=OP11 (Microgenomates) organism_desc= OP11 similarity UNIREF
DB: UNIREF100
  • Identity: 78.7
  • Coverage: 362.0
  • Bit_score: 579
  • Evalue 1.80e-162
RpoD subfamily RNA polymerase sigma-70 subunit similarity KEGG
DB: KEGG
  • Identity: 53.8
  • Coverage: 359.0
  • Bit_score: 383
  • Evalue 5.50e-104
Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_06_38_12_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 84.8
  • Coverage: 362.0
  • Bit_score: 624
  • Evalue 5.30e-176

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Taxonomy

R_RIF_OD1_06_38_12 → RIF-OD1-6 → Parcubacteria → Bacteria

Sequences

DNA sequence
Length: 1089
ATGAGTAACAAAATTCCAAAAAACATTAAAGAGTTATTAAAGCGGGGAGAGAGTGATGGTTTTCTTGTCCAAGATGACATATTAATGATTTTCCCCAACCCAGAAGAGCATGTTGAAAAAGTTGATGAGTTTTTCGATTCAGCATTTGAACTAGGTATCGATATTTTTGAAACAACTTCAACAAGAGAAGACGAAGAAGCAAACAAATCTTCAGAAGAAATTGAAAAAGAGCTTGAAAAATTAATTGGCGGGAAGCATGGAGAATCTTTAGACCCAATAAAAAAATATCTTAAAGAAATTGGCAGGACCCCCCTTCTTATATTTGAAGATGAAATCGATCTTGCCAAAAGAGCTGAAAAAGGAGACATGGATGCAAAAGATAGATTAATAAAAGCAAATTTAAGACTCGTCGTATCAATTGCAAAAAAATATCTTGGAAGAAGGCTTACATTTCTAGATCTGATTCAAGAGGGTAATAAAGGTTTGATTCGTGGTGTTGAGAAATACGATTGGAGAAGGGGGTTCAAGTTTTCAACTTATGCAACTTGGTGGATAAGACAAGCGATAACGCGTGCAATAGCTGATCAGTCAAGAACGATTAGAATTCCAGTTCACATGGTTGATCAGATTAATCGATTTTACAAAACTCAGCGTAAATTGATGCAAAAACATGGTAAAGACCCAGATATAAAAGATATTGCAAAAGAGATGGAAATTACTGTAGATGATGCAGAAAATTTAATGAGAATATCTCAGCAGCCAAAATCTCTTTCTACCCCGGTCGGGGATGATAAAGAAGCAACATTAGAGCAGTTTATTGCCGATCGTTCGAAGCCAAGTCTTTACGACGCTGTATCTTCTGAGTTACTCAAAGATGCACTCCAGGATGTGCTTGAAACGCTATCTCCTCGTGAAAAGAAAGTGTTAATAATGCGCTTTGGACTCGAGGATGGCAAACCAAAAACACTTGAAGAAGTAGGCAAGGAGTTCAAAGTTACACGAGAGCGCATCAGGCAGATAGAAGCTAAGGCGATCAGAAAACTAAAGCACCCAACACGAGCTCGAAAACTAAGAGACTTTTTAGACTAA
PROTEIN sequence
Length: 363
MSNKIPKNIKELLKRGESDGFLVQDDILMIFPNPEEHVEKVDEFFDSAFELGIDIFETTSTREDEEANKSSEEIEKELEKLIGGKHGESLDPIKKYLKEIGRTPLLIFEDEIDLAKRAEKGDMDAKDRLIKANLRLVVSIAKKYLGRRLTFLDLIQEGNKGLIRGVEKYDWRRGFKFSTYATWWIRQAITRAIADQSRTIRIPVHMVDQINRFYKTQRKLMQKHGKDPDIKDIAKEMEITVDDAENLMRISQQPKSLSTPVGDDKEATLEQFIADRSKPSLYDAVSSELLKDALQDVLETLSPREKKVLIMRFGLEDGKPKTLEEVGKEFKVTRERIRQIEAKAIRKLKHPTRARKLRDFLD*