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DGJ10_1_scaffold_78

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Displaying items 1-30 of 61 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
DGJ10_1_scaffold_78_trna_1
unknown

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44..119
DNA (76bp)
transferRNA Asp
DGJ10_1_scaffold_78_1
Moorella glycerini, Moorella, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

467..1369
DNA (903bp) protein (301aa)
Methyltransferase {ECO:0000256|RuleBase:RU362026}; EC=2.1.1.- {ECO:0000256|RuleBase:RU362026};; species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Moorella group; Moorella.;" source="Moorella glycerini.;"
DNA methyltransferase Tax=Calescamantes bacterium JGI 0000106-G12 RepID=UPI0003B6884D
adenine-specific DNA methylase
DGJ10_1_scaffold_78_2

Not on your lists

1366..2232
DNA (867bp) protein (289aa)
type II restriction endonuclease Tax=Calescamantes bacterium JGI 0000106-G12 RepID=UPI0003B52BED
Marine sediment metagenome DNA, contig: S03H2_S15449 {ECO:0000313|EMBL:GAH64729.1}; Flags: Fragment;; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
DGJ10_1_scaffold_78_3
unknown

Not on your lists

2238..2639
DNA (402bp) protein (134aa)

This feature has no annotations

DGJ10_1_scaffold_78_4
RIFOXYA2_FULL_OD1_Magasanikbacteria_44_8_curated, Magasanikbacteria, Parcubacteria, Bacteria

Not on your lists

2614..3081
DNA (468bp) protein (156aa)
Uncharacterized protein Tax=Kosmotoga olearia (strain TBF 19.5.1) RepID=C5CH41_KOSOT
hypothetical protein
Tax=RIFOXYA2_FULL_OD1_Magasanikbacteria_44_8_curated
DGJ10_1_scaffold_78_5
RBG_13_RIF_OD1_07_36_15_curated, RIF-OD1-7, Parcubacteria, Bacteria

Not on your lists


3688..4734
DNA (1047bp) protein (349aa)
hypothetical protein Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI000370918B
phenylalanyl-tRNA synthetase subunit alpha
Tax=RBG_13_RIF_OD1_07_36_15_curated
DGJ10_1_scaffold_78_6
CG_CPR10_03, CG_CPR10, Bacteria

Not on your lists


4744..6852
DNA (2109bp) protein (703aa)
hypothetical protein Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI00036FB867
phenylalanyl-tRNA synthetase, beta subunit
Tax=CG_CPR10_03
DGJ10_1_scaffold_78_7
RHI_RIF_OD1_07_40_12, RIF-OD1-7, Parcubacteria, Bacteria

Not on your lists

6859..8793
DNA (1935bp) protein (645aa)
gyrB; DNA gyrase subunit B (EC:5.99.1.3)
hypothetical protein Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI00036520EF
Tax=RIFCSPHIGHO2_12_FULL_RIF_OD1_07_40_12_curated
DGJ10_1_scaffold_78_8
CG_CPR10_01, CG_CPR10, Bacteria

Not on your lists

9009..9554
DNA (546bp) protein (182aa)
hypothetical protein Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI000380871C
antitermination protein NusG
Tax=CG_CPR10_01
DGJ10_1_scaffold_78_9
CG_CPR10_02, CG_CPR10, Bacteria

Not on your lists


9551..9976
DNA (426bp) protein (142aa)
50S ribosomal protein L11 Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI00035F6758
rplK; 50S ribosomal protein L11
Tax=CG_CPR10_02
DGJ10_1_scaffold_78_10
RBG_13_Bathyarchaeota_52_12_curated, Bathyarchaeota, Archaea

Not on your lists

9978..10508
DNA (531bp) protein (177aa)
Uncharacterized protein Tax=Clostridium sp. CAG:138 RepID=R6B362_9CLOT
Deoxycytidylate deaminase
Tax=RBG_13_Bathyarchaeota_52_12_curated
DGJ10_1_scaffold_78_11
BJP_IG2069_Spirochaetales_48_31, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

Not on your lists

10505..11173
DNA (669bp) protein (223aa)
thymidylate synthase (EC:2.1.1.148); K03465 thymidylate synthase (FAD) [EC:2.1.1.148] bin=RBG2 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=RBG2 organism_group=Chloroflexi
thymidylate synthase, flavin-dependent (EC:2.1.1.148)
Tax=BJP_IG2069_Spirochaetales_48_31
DGJ10_1_scaffold_78_12
CG_CPR03_03, CG_CPR03, Bacteria

Not on your lists

11248..11871
DNA (624bp) protein (208aa)
thymidylate kinase (EC:2.7.4.9)
dTMP kinase Tax=Candidatus Parvarchaeum acidiphilum ARMAN-4 RepID=D2EGN9_9EURY bin=ACD7 species=Candidatus Parvarchaeum acidiphilum genus=Candidatus Parvarchaeum taxon_order=unknown taxon_class=unknown phylum=Euryarchaeota tax=ACD7 organism_group=OD1-i organism_desc=OD1-i
Tax=CG_CPR03_03
DGJ10_1_scaffold_78_13

Not on your lists

comp(12031..12810)
DNA (780bp) protein (260aa)
Marine sediment metagenome DNA, contig: S12H4_C03519 {ECO:0000313|EMBL:GAI68003.1}; Flags: Fragment;; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
DGJ10_1_scaffold_78_14
unknown

Not on your lists

12929..13381
DNA (453bp) protein (151aa)

This feature has no annotations

DGJ10_1_scaffold_78_15
CG_Falkow_02, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

13546..14220
DNA (675bp) protein (225aa)
hypothetical protein Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI0003690330
deoC; deoxyribose-phosphate aldolase
Tax=CG_Falkow_02
DGJ10_1_scaffold_78_16
R_RIF_OD1_07_41_9, RIF-OD1-7, Parcubacteria, Bacteria

Not on your lists

14233..15699
DNA (1467bp) protein (489aa)
aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B (EC:6.3.5.-)
hypothetical protein Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI00036D9163
Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_07_41_9_curated
DGJ10_1_scaffold_78_17
unknown

Not on your lists

15726..15944
DNA (219bp) protein (73aa)

This feature has no annotations

DGJ10_1_scaffold_78_18
RBG_13_RIF_OD1_07_42_11_curated, RIF-OD1-7, Parcubacteria, Bacteria

Not on your lists

comp(15952..16863)
DNA (912bp) protein (304aa)
tRNA delta(2)-isopentenylpyrophosphate transferase (EC:2.5.1.75)
hypothetical protein Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI00037FFBA5
Tax=RBG_13_RIF_OD1_07_42_11_curated
DGJ10_1_scaffold_78_19
unknown

Not on your lists

comp(17096..17245)
DNA (150bp) protein (50aa)

This feature has no annotations

DGJ10_1_scaffold_78_20
RBG_13_RIF_OD1_07_36_15_curated, RIF-OD1-7, Parcubacteria, Bacteria

Not on your lists

comp(17200..18507)
DNA (1308bp) protein (436aa)
tRNA-i(6)A37 thiotransferase protein MiaB bin=GWC1_CPR2_39_9 species=ACD15 genus=ACD15 taxon_order=ACD15 taxon_class=ACD15 phylum=OD1-i tax=GWC1_CPR2_39_9 organism_group=CPR2 organism_desc=Good
miaB; tRNA-i(6)A37 thiotransferase enzyme MiaB
Tax=RBG_13_RIF_OD1_07_36_15_curated
DGJ10_1_scaffold_78_21
CG_CPR03_03, CG_CPR03, Bacteria

Not on your lists

comp(18600..20024)
DNA (1425bp) protein (475aa)
hypothetical protein Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI0003625A54
hypothetical protein
Tax=CG_CPR03_03
DGJ10_1_scaffold_78_22
RBG_13_RIF_OD1_07_42_11_curated, RIF-OD1-7, Parcubacteria, Bacteria

Not on your lists

comp(20300..22006)
DNA (1707bp) protein (569aa)
thrS; threonyl-tRNA synthetase (EC:6.1.1.3)
hypothetical protein Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI00036DA2A5
Tax=RBG_13_RIF_OD1_07_42_11_curated
DGJ10_1_scaffold_78_23
RBG_13_RIF_OD1_07_42_11_curated, RIF-OD1-7, Parcubacteria, Bacteria

Not on your lists

comp(22018..25185)
DNA (3168bp) protein (1056aa)
DNA polymerase III subunit alpha (EC:2.7.7.7)
hypothetical protein Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI000381959E
Tax=RBG_13_RIF_OD1_07_42_11_curated
DGJ10_1_scaffold_78_24
CG_CPR10_02, CG_CPR10, Bacteria

Not on your lists

25238..25900
DNA (663bp) protein (221aa)
ribonuclease h (EC:3.1.26.4)
hypothetical protein Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI000378DBB9
Tax=CG_CPR10_02
DGJ10_1_scaffold_78_25
CG_CPR10_02, CG_CPR10, Bacteria

Not on your lists

25932..26168
DNA (237bp) protein (79aa)
hypothetical protein Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI00035F3F5F
rpmF; 50S ribosomal protein L32
Tax=CG_CPR10_02
DGJ10_1_scaffold_78_26
CG_CPR10_02, CG_CPR10, Bacteria

Not on your lists

26199..26621
DNA (423bp) protein (141aa)
hypothetical protein Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI0003706B9D
putative transcription termination factor
Tax=CG_CPR10_02
DGJ10_1_scaffold_78_27
CG_CPR10_02, CG_CPR10, Bacteria

Not on your lists

26618..27307
DNA (690bp) protein (230aa)
hypothetical protein Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI000379C34A
hypothetical protein
Tax=CG_CPR10_02
DGJ10_1_scaffold_78_28
CG_CPR10_03, CG_CPR10, Bacteria

Not on your lists


27322..27654
DNA (333bp) protein (111aa)
hypothetical protein Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI00036D38F0
rpsP; 30S ribosomal protein S16
Tax=CG_CPR10_03
DGJ10_1_scaffold_78_29
unknown

Not on your lists

27789..28265
DNA (477bp) protein (159aa)

This feature has no annotations

Displaying items 1-30 of 61 in total

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