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QZM_B2_scaffold_111

Search features with annotation key words

Displaying items 1-30 of 75 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
QZM_B2_scaffold_111_1
OD1_GWC2_34_28, Campbellbacteria, Parcubacteria, Bacteria

Not on your lists

1..2973
DNA (2973bp) protein (991aa)
hypothetical protein bin=OD1_GWC2_34_28 species=Limnobacter sp. MED105 genus=Limnobacter taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
hypothetical protein
Tax=OD1_GWC2_34_28
QZM_B2_scaffold_111_2
GWC2_TM7_48_9, Candidatus Saccharibacteria, Bacteria

Not on your lists

3180..3968
DNA (789bp) protein (263aa)
rgpC; polysaccharide export ABC transporter permease bin=GWF1_WS6_37_7 species=WS6_GWF1_36_7 genus=WS6_GWF1_36_7 taxon_order=WS6_GWF1_36_7 taxon_class=WS6_GWF1_36_7 phylum=WS6 tax=GWF1_WS6_37_7 organism_group=WS6 (Doikabacteria)
ABC-type polysaccharide/polyol phosphate export system, permease component {ECO:0000313|EMBL:KKW02500.1}; species="Bacteria; Candidatus Saccharibacteria.;" source="Candidatus Saccharibacteria bacterium GW2011_GWC2_48_9.;"
rhamnose-containing polysacharide translocation permease
QZM_B2_scaffold_111_3
GWC2_CPR2_39_35, CPR2, Bacteria

Not on your lists

3985..4737
DNA (753bp) protein (251aa)
ABC transporter-related protein bin=GWC1_TM7_41_48 species=ACD1 genus=ACD1 taxon_order=ACD1 taxon_class=ACD1 phylum=OD1-i tax=GWC1_TM7_41_48 organism_group=TM7
ABC transporter
Tax=GWC2_CPR2_39_35
QZM_B2_scaffold_111_4
RLO_RIF_OD1_11_47_20, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

4771..5535
DNA (765bp) protein (255aa)
Uncharacterized protein Tax=Sphingomonadaceae RepID=Q1NBR5_9SPHN
HAD-superfamily hydrolase
Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_11_47_20_curated
QZM_B2_scaffold_111_5
RLO_OD1_Magasanikbacteria_43_12, Magasanikbacteria, Parcubacteria, Bacteria

Not on your lists

5539..6822
DNA (1284bp) protein (428aa)
Uncharacterized protein Tax=uncultured bacterium RepID=K2EB09_9BACT
Phospho-N-acetylmuramoyl-pentapeptide-transferase
Tax=RIFCSPLOWO2_12_FULL_OD1_Magasanikbacteria_43_12_curated
QZM_B2_scaffold_111_6
Firmicutes bacterium CAG:313, Tenericutes, Bacteria

Not on your lists

comp(6819..7781)
DNA (963bp) protein (321aa)
Methionyl-tRNA formyltransferase {ECO:0000256|HAMAP-Rule:MF_00182, ECO:0000256|SAAS:SAAS00043680}; EC=2.1.2.9 {ECO:0000256|HAMAP-Rule:MF_00182, ECO:0000256|SAAS:SAAS00150580};; species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:313.;"
fmt; methionyl-tRNA formyltransferase (EC:2.1.2.9)
Methionyl-tRNA formyltransferase Tax=Firmicutes bacterium CAG:313 RepID=R6XET1_9FIRM
QZM_B2_scaffold_111_7
GWA2_OP11_nov_42_16, Gottesmanbacteria, Microgenomates, Bacteria

Not on your lists

comp(7812..8573)
DNA (762bp) protein (254aa)
Putative uncharacterized protein Tax=Protochlamydia amoebophila (strain UWE25) RepID=Q6MCC9_PARUW bin=OP11_3 species=Candidatus Protochlamydia amoebophila genus=Candidatus Protochlamydia taxon_order=Chlamydiales taxon_class=Chlamydiia phylum=Chlamydiae tax=OP11_3 organism_group=OP11 (Microgenomates) organism_desc=Complete genome
Uncharacterized protein {ECO:0000313|EMBL:KKS41930.1}; species="Bacteria; Microgenomates.;" source="Microgenomates (Gottesmanbacteria) bacterium GW2011_GWA2_42_16.;"
hypothetical protein
QZM_B2_scaffold_111_8
unknown

Not on your lists

comp(8616..8960)
DNA (345bp) protein (115aa)

This feature has no annotations

QZM_B2_scaffold_111_9
Desulfobacula toluolica, Desulfobacula, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9315..10319
DNA (1005bp) protein (335aa)
galE; UDP-glucose 4-epimerase GalE (EC:5.1.3.2)
GalE: UDP-glucose 4-epimerase {ECO:0000313|EMBL:CCK79399.1}; EC=5.1.3.2 {ECO:0000313|EMBL:CCK79399.1};; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobacteraceae; Desulfobacula.;" source="Desulfobacula toluolica (strain DSM 7467 / Tol2).;"
GalE: UDP-glucose 4-epimerase Tax=Desulfobacula toluolica (strain DSM 7467 / Tol2) RepID=K0N5R3_DESTT
QZM_B2_scaffold_111_10
GWA2_WS6_37_6, WS6, Bacteria

Not on your lists

comp(10425..12704)
DNA (2280bp) protein (760aa)
DNA topoisomerase I (EC:5.99.1.2); K03168 DNA topoisomerase I [EC:5.99.1.2] bin=GWF1_WS6_37_7 species=WS6_GWF1_36_7 genus=WS6_GWF1_36_7 taxon_order=WS6_GWF1_36_7 taxon_class=WS6_GWF1_36_7 phylum=WS6 tax=GWF1_WS6_37_7 organism_group=WS6 (Doikabacteria)
DNA topoisomerase I (EC:5.99.1.2)
Topoisomerase protein {ECO:0000313|EMBL:KKQ35201.1}; species="Bacteria; candidate division WS6.;" source="candidate division WS6 bacterium GW2011_GWA2_37_6.;"
QZM_B2_scaffold_111_trna_1
unknown

Not on your lists

12801..12881
DNA (81bp)
transferRNA Leu
QZM_B2_scaffold_111_11
GWF2_OD1_41_430, Uhrbacteria, Parcubacteria, Bacteria

Not on your lists

12964..14826
DNA (1863bp) protein (621aa)
metal dependent hydrolase (EC:3.-.-.-)
Uncharacterized protein Tax=uncultured bacterium RepID=K1ZSN8_9BACT
RNA-metabolising metallo-beta-lactamase {ECO:0000313|EMBL:KKS10953.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria (Uhrbacteria) bacterium GW2011_GWF2_41_430.;"
QZM_B2_scaffold_111_12

Not on your lists

comp(14832..16265)
DNA (1434bp) protein (478aa)
alpha-L-glutamate ligase-like protein bin=ACD1 species=ACD1 genus=ACD1 taxon_order=ACD1 taxon_class=ACD1 phylum=OD1-i tax=ACD1 organism_group=OD1-i organism_desc=OD1-i
Alpha-L-glutamate ligase-like protein {ECO:0000313|EMBL:EKE11582.1}; species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein
QZM_B2_scaffold_111_13

Not on your lists

comp(16258..16950)
DNA (693bp) protein (231aa)
Uncharacterized protein Tax=Rivularia sp. PCC 7116 RepID=K9R6E6_9CYAN bin=OP11_3 species=Rivularia sp. PCC 7116 genus=Rivularia taxon_order=Nostocales taxon_class=unknown phylum=Cyanobacteria tax=OP11_3 organism_group=OP11 (Microgenomates) organism_desc=Complete genome
Uncharacterized protein {ECO:0000313|EMBL:KKQ57811.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria (OD1-vii) bacterium GW2011_GWA2_38_13b.;"
QZM_B2_scaffold_111_14
RBG_19FT_COMBO_WWE3_34_6_curated, WWE3, Bacteria

Not on your lists

comp(17025..19226)
DNA (2202bp) protein (734aa)
hypothetical protein
rmg:Rhom172_1740 acetyl coenzyme A synthetase (ADP forming), alpha domain-containing protein; K09181 hypothetical protein bin=RAAC2_WWE3 species=RAAC2_WWE3 genus=RAAC2_WWE3 taxon_order=RAAC2_WWE3 taxon_class=RAAC2_WWE3 phylum=WWE3 tax=RAAC2_WWE3 organism_group=WWE3
Tax=RBG_19FT_COMBO_WWE3_34_6_curated
QZM_B2_scaffold_111_15
Archaeoglobus sulfaticallidus, Archaeoglobus, Archaeoglobales, Archaeoglobi, Euryarchaeota, Archaea

Not on your lists

19332..21005
DNA (1674bp) protein (558aa)
DNA ligase {ECO:0000256|HAMAP-Rule:MF_00407, ECO:0000256|RuleBase:RU000617}; EC=6.5.1.1 {ECO:0000256|HAMAP-Rule:MF_00407, ECO:0000256|RuleBase:RU000617};; Polydeoxyribonucleotide synthase [ATP] {ECO:0000256|HAMAP-Rule:MF_00407}; species="Archaea; Euryarchaeota; Archaeoglobi; Archaeoglobales; Archaeoglobaceae; Archaeoglobus.;" source="Archaeoglobus sulfaticallidus PM70-1.;"
DNA ligase Tax=Archaeoglobus sulfaticallidus PM70-1 RepID=N0BM06_9EURY
DNA ligase I, ATP-dependent (dnl1)
QZM_B2_scaffold_111_16
unknown

Not on your lists

21147..21716
DNA (570bp) protein (190aa)

This feature has no annotations

QZM_B2_scaffold_111_17
unknown

Not on your lists

21753..22280
DNA (528bp) protein (176aa)

This feature has no annotations

QZM_B2_scaffold_111_trna_5
unknown

Not on your lists

comp(23616..23697)
DNA (82bp)
transferRNA Leu
QZM_B2_scaffold_111_18
Caldivirga maquilingensis, Caldivirga, Thermoproteales, Thermoprotei, Crenarchaeota, Archaea

Not on your lists

23783..24646
DNA (864bp) protein (288aa)
Alpha-L-glutamate ligase, RimK family Tax=Caldivirga maquilingensis (strain ATCC 700844 / DSM 13496 / JCM 10307 / IC-167) RepID=A8M8Q5_CALMQ
alpha-L-glutamate ligase
Alpha-L-glutamate ligase, RimK family {ECO:0000313|EMBL:ABW02124.1}; species="Archaea; Crenarchaeota; Thermoprotei; Thermoproteales; Thermoproteaceae; Caldivirga.;" source="Caldivirga maquilingensis (strain ATCC 700844 / DSM 13496 / JCM 10307; / IC-167).;"
QZM_B2_scaffold_111_19
unknown

Not on your lists

comp(24681..25334)
DNA (654bp) protein (218aa)

This feature has no annotations

QZM_B2_scaffold_111_20
R_RIF_OD1_03_48_11, RIF-OD1-3, Parcubacteria, Bacteria

Not on your lists

25421..27598
DNA (2178bp) protein (726aa)
excinuclease ABC subunit B; K03702 excinuclease ABC subunit B bin=GWF1_WS6_37_7 species=WS6_GWF1_36_7 genus=WS6_GWF1_36_7 taxon_order=WS6_GWF1_36_7 taxon_class=WS6_GWF1_36_7 phylum=WS6 tax=GWF1_WS6_37_7 organism_group=WS6 (Doikabacteria)
excinuclease ABC subunit B
Tax=RIFCSPLOWO2_02_FULL_RIF_OD1_03_48_11_curated
QZM_B2_scaffold_111_21
R_OP11_Gottesmanbacteria_42_22, Gottesmanbacteria, Microgenomates, Bacteria

Not on your lists

27663..28250
DNA (588bp) protein (196aa)
hypothetical protein bin=GWF2_WS6 species=WS6_CLOSED genus=WS6_CLOSED taxon_order=WS6_CLOSED taxon_class=WS6_CLOSED phylum=WS6 tax=GWF2_WS6 organism_group=WS6 (Doikabacteria) organism_desc=Complete genome
Tax=RIFCSPLOWO2_01_FULL_OP11_Gottesmanbacteria_42_22_curated
QZM_B2_scaffold_111_22
RHI_SM2F11_48_16, SM2F11, Bacteria

Not on your lists

28278..29222
DNA (945bp) protein (315aa)
serine-type D-Ala-D-Ala carboxypeptidase (EC:3.4.16.4); K07258 D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] bin=PER_GWF2_38_29 species=PER_GWF2_38_31 genus=PER_GWF2_38_31 taxon_order=PER_GWF2_38_31 taxon_class=PER_GWF2_38_31 phylum=PER tax=PER_GWF2_38_29 organism_group=PER (Peregrinibacteria)
D-alanyl-D-alanine carboxypeptidase
Tax=RIFCSPHIGHO2_12_FULL_SM2F11_48_16_curated
QZM_B2_scaffold_111_23
GWF2_WS6_complete_39_15, WS6, Bacteria

Not on your lists

29254..30717
DNA (1464bp) protein (488aa)
tRNA adenylyltransferase/tRNA cytidylyltransferase (EC:2.7.7.25 2.7.7.21)
polynucleotide adenylyltransferase/metal dependent phosphohydrolase bin=GWF2_WS6 species=WS6_CLOSED genus=WS6_CLOSED taxon_order=WS6_CLOSED taxon_class=WS6_CLOSED phylum=WS6 tax=GWF2_WS6 organism_group=WS6 (Doikabacteria) organism_desc=Complete genome
Polynucleotide adenylyltransferase/metal dependent phosphohydrolase {ECO:0000313|EMBL:KKR06333.1}; species="Bacteria; candidate division WS6.;" source="candidate division WS6 bacterium GW2011_GWF2_39_15.;"
QZM_B2_scaffold_111_24
RIFOXYD1_FULL_OP11_Collierbacteria_40_9_curated, Collierbacteria, Microgenomates, Bacteria

Not on your lists

30727..31746
DNA (1020bp) protein (340aa)
Tryptophan--tRNA ligase bin=GWC1_OD1_38_17 species=GWF2_TM6_27_16 genus=GWF2_TM6_27_16 taxon_order=GWF2_TM6_27_16 taxon_class=GWF2_TM6_27_16 phylum=TM6 tax=GWC1_OD1_38_17 organism_group=OD1 (Parcubacteria) organism_desc=Good + Candidate for curation
trpS2; Tryptophanyl-tRNA synthetase
Tax=RIFOXYD1_FULL_OP11_Collierbacteria_40_9_curated
QZM_B2_scaffold_111_25
Capnocytophaga granulosa, Capnocytophaga, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

31762..32193
DNA (432bp) protein (144aa)
Uncharacterized protein Tax=Capnocytophaga granulosa ATCC 51502 RepID=S2VQP4_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:EPD29091.1}; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Capnocytophaga.;" source="Capnocytophaga granulosa ATCC 51502.;"
hypothetical protein
QZM_B2_scaffold_111_26
RIFOXYD2_FULL_Elusimicrobia_34_30_curated, Elusimicrobia, Bacteria

Not on your lists

32243..33409
DNA (1167bp) protein (389aa)
tgt; Queuine tRNA-ribosyltransferase
Queuine tRNA-ribosyltransferase bin=GWE2_OD1_38_254 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWE2_OD1_38_254 organism_group=OD1 (Parcubacteria)
Tax=RIFOXYD2_FULL_Elusimicrobia_34_30_curated
QZM_B2_scaffold_111_27
GWE1_OP11_38_10, Shapirobacteria, Microgenomates, Bacteria

Not on your lists

33448..34941
DNA (1494bp) protein (498aa)
(p)ppGpp synthetase I SpoT/RelA (EC:2.7.6.5)
(P)ppGpp synthetase I, SpoT/RelA Tax=Caldicellulosiruptor obsidiansis (strain ATCC BAA-2073 / strain OB47) RepID=D9TFR8_CALOO
(P)ppGpp synthetase I, SpoT/RelA {ECO:0000313|EMBL:KKQ49573.1}; species="Bacteria; Microgenomates.;" source="Microgenomates (Shapirobacteria) bacterium GW2011_GWE1_38_10.;"
QZM_B2_scaffold_111_28
R_OP11_Woesebacteria_40_22, Woesebacteria, Microgenomates, Bacteria

Not on your lists

comp(34983..35597)
DNA (615bp) protein (205aa)
nucleoside diphosphate kinase; K00940 nucleoside-diphosphate kinase [EC:2.7.4.6] bin=GWE1_Berkelbacteria_39_12 species=ACD58_39_12 genus=ACD58_39_12 taxon_order=ACD58_39_12 taxon_class=ACD58_39_12 phylum=ACD58 tax=GWE1_Berkelbacteria_39_12 organism_group=ACD58 (Berkelbacteria) organism_desc=Complete genome (ACD58 lineage)
nucleoside diphosphate kinase
Tax=RIFCSPHIGHO2_01_FULL_OP11_Woesebacteria_40_22_curated
Displaying items 1-30 of 75 in total

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