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07M_4_2014_scaffold_3356

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Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
07M_4_2014_scaffold_3356_1
R_OD1_39_11, Parcubacteria, Bacteria

Not on your lists

comp(1..558)
DNA (558bp) protein (186aa)
D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein id=3506657 bin=GWC1_OD1_38_17 species=Thermosinus carboxydivorans genus=Thermosinus taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=GWC1_OD1_38_17 organism_group=OD1 (Parcubacteria) organism_desc=Good + Candidate for curation
D-isomer specific 2-hydroxyacid dehydrogenase
Tax=RIFCSPLOWO2_01_FULL_OD1_39_11_curated
07M_4_2014_scaffold_3356_2

Not on your lists

640..1209
DNA (570bp) protein (190aa)
Transposase {ECO:0000313|EMBL:KKR58645.1}; TaxID=1618924 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC2_40_31.;"
Transposase id=5227387 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
hypothetical protein
07M_4_2014_scaffold_3356_3
unknown

Not on your lists

comp(1183..1335)
DNA (153bp) protein (51aa)

This feature has no annotations

07M_4_2014_scaffold_3356_4
R_OD1_41_19, Parcubacteria, Bacteria

Not on your lists

comp(1408..2271)
DNA (864bp) protein (288aa)
Tagatose-bisphosphate aldolase id=4790072 bin=GWC2_OD1_43_27 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWC2_OD1_43_27 organism_group=OD1 (Parcubacteria) organism_desc=Same as C1_43_61 and D1_43_18 Curated this version (complete) rbh
Tagatose-bisphosphate aldolase
Tax=RIFCSPHIGHO2_02_OD1_41_19_curated
07M_4_2014_scaffold_3356_5
GWB1_OD1_41_6_partial, Parcubacteria, Bacteria

Not on your lists

comp(2284..2736)
DNA (453bp) protein (151aa)
Sugar kinase, ribokinase family {ECO:0000313|EMBL:KKS13862.1}; TaxID=1618869 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWB1_41_6.;"
Sugar kinase, ribokinase family (Fragment) id=4790071 bin=GWC2_OD1_43_27 species=RAAC3_TM7 genus=RAAC3_TM7 taxon_order=RAAC3_TM7 taxon_class=RAAC3_TM7 phylum=TM7 tax=GWC2_OD1_43_27 organism_group=OD1 (Parcubacteria) organism_desc=Same as C1_43_61 and D1_43_18 Curated this version (complete)
Sugar kinase, ribokinase family
07M_4_2014_scaffold_3356_6
unknown

Not on your lists

comp(3026..3244)
DNA (219bp) protein (73aa)

This feature has no annotations

07M_4_2014_scaffold_3356_7
R_OD1_39_11, Parcubacteria, Bacteria

Not on your lists

comp(3272..4279)
DNA (1008bp) protein (336aa)
PfkB family kinase, partial id=2130223 bin=GWE2_OD1_40_11 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWE2_OD1_40_11 organism_group=OD1 (Parcubacteria)
hypothetical protein
Tax=RIFCSPLOWO2_01_FULL_OD1_39_11_curated
07M_4_2014_scaffold_3356_8
GWA1_OD1_40_21, Parcubacteria, Bacteria

Not on your lists

comp(4291..5286)
DNA (996bp) protein (332aa)
Uncharacterized protein {ECO:0000313|EMBL:KKR54172.1}; TaxID=1618784 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA1_40_21.;"
Transketolase central region id=3506674 bin=GWC1_OD1_38_17 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWC1_OD1_38_17 organism_group=OD1 (Parcubacteria) organism_desc=Good + Candidate for curation rbh
transketolase
07M_4_2014_scaffold_3356_9
R_OD1_39_11, Parcubacteria, Bacteria

Not on your lists

comp(5288..6166)
DNA (879bp) protein (293aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA011-A09 RepID=UPI0003606196
Transketolase protein
Tax=RIFCSPLOWO2_01_FULL_OD1_39_11_curated
07M_4_2014_scaffold_3356_10
R_OD1_41_19, Parcubacteria, Bacteria

Not on your lists

comp(6153..6782)
DNA (630bp) protein (210aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA010-E09 RepID=UPI00036FE8E4
ribulose-phosphate 3-epimerase
Tax=RIFCSPHIGHO2_02_OD1_41_19_curated
07M_4_2014_scaffold_3356_11

Not on your lists

comp(6854..7297)
DNA (444bp) protein (148aa)
Ribose-5-phosphate isomerase B id=3506680 bin=GWC1_OD1_38_17 species=Robiginitalea biformata genus=Robiginitalea taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWC1_OD1_38_17 organism_group=OD1 (Parcubacteria) organism_desc=Good + Candidate for curation
Ribose-5-phosphate isomerase B {ECO:0000313|EMBL:KKQ58631.1}; TaxID=1618936 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWD1_38_16.;"
ribose-5-phosphate isomerase B
07M_4_2014_scaffold_3356_12
Dictyoglomus thermophilum, Dictyoglomus, Dictyoglomales, Dictyoglomia, Dictyoglomi, Bacteria

Not on your lists

comp(7294..7710)
DNA (417bp) protein (139aa)
Putative uncharacterized protein n=1 Tax=Dictyoglomus thermophilum (strain ATCC 35947 / DSM 3960 / H-6-12) RepID=B5YC15_DICT6
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACI18491.1}; TaxID=309799 species="Bacteria; Dictyoglomi; Dictyoglomales; Dictyoglomaceae; Dictyoglomus.;" source="Dictyoglomus thermophilum (strain ATCC 35947 / DSM 3960 / H-6-12).;"
07M_4_2014_scaffold_3356_13
RBG_13_RIF_OD1_08_40_8_curated, RIF-OD1-8, Parcubacteria, Bacteria

Not on your lists

comp(7712..8146)
DNA (435bp) protein (145aa)
Nucleotidyltransferase, putative n=1 Tax=Dictyoglomus thermophilum (strain ATCC 35947 / DSM 3960 / H-6-12) RepID=B5YBA4_DICT6
nucleotidyltransferase
Tax=RBG_13_RIF_OD1_08_40_8_curated
07M_4_2014_scaffold_3356_14
unknown

Not on your lists

comp(8256..8435)
DNA (180bp) protein (60aa)

This feature has no annotations

07M_4_2014_scaffold_3356_15
Parcubacteria bacterium GW2011_GWF2_42_7, Parcubacteria, Bacteria

Not on your lists

comp(8374..9006)
DNA (633bp) protein (211aa)
hypothetical protein n=1 Tax=Microgenomates bacterium SCGC AAA255-J07 RepID=UPI000374D2D2
Uncharacterized protein {ECO:0000313|EMBL:KKS71726.1}; TaxID=1618966 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWF2_42_7.;"
hypothetical protein
07M_4_2014_scaffold_3356_16
R_OD1_41_19, Parcubacteria, Bacteria

Not on your lists

comp(9017..10000)
DNA (984bp) protein (328aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA010-E09 RepID=UPI000378059E
glyceraldehyde 3-phosphate dehydrogenase
Tax=RIFCSPHIGHO2_02_OD1_41_19_curated
07M_4_2014_scaffold_3356_17
GWB1_OD1_41_6_partial, Parcubacteria, Bacteria

Not on your lists

10094..10759
DNA (666bp) protein (222aa)
Putative uncharacterized protein n=1 Tax=uncultured SUP05 cluster bacterium RepID=D0U4B2_9GAMM id=130478 bin=ACD7 species=uncultured SUP05 cluster bacterium genus=unknown taxon_order=Oceanospirillales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=ACD7 organism_group=OD1-i organism_desc=OD1-i
Uncharacterized protein {ECO:0000313|EMBL:KKS15739.1}; TaxID=1618869 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWB1_41_6.;"
hypothetical protein
07M_4_2014_scaffold_3356_18
GWB1_OD1_43_8, Parcubacteria, Bacteria

Not on your lists

comp(10751..12886)
DNA (2136bp) protein (712aa)
Uncharacterized protein {ECO:0000313|EMBL:KKT18973.1}; TaxID=1618874 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWB1_43_8.;"
Putative uncharacterized protein id=4968544 bin=GWA2_CPR4_42_17 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=GWA2_CPR4_42_17 organism_group=CPR4 organism_desc=from megabin
Tetratricopeptide TPR_2
07M_4_2014_scaffold_3356_19
R_OD1_39_11, Parcubacteria, Bacteria

Not on your lists

comp(12879..13241)
DNA (363bp) protein (121aa)
Tax=RIFCSPLOWO2_01_FULL_OD1_39_11_curated
07M_4_2014_scaffold_3356_20
R_OP11_Roizmanbacteria_37_12, Roizmannbacteria, Microgenomates, Bacteria

Not on your lists

comp(13422..13658)
DNA (237bp) protein (79aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2D484_9BACT
hypothetical protein
Tax=RIFCSPLOWO2_01_FULL_OP11_Roizmanbacteria_37_12_curated
07M_4_2014_scaffold_3356_21
R_OD1_56_18, Parcubacteria, Bacteria

Not on your lists

comp(13814..14140)
DNA (327bp) protein (109aa)
hypothetical protein ANI_1_1710074 n=1 Tax=Aspergillus niger (strain CBS 513.88 / FGSC A1513) RepID=UPI0001F26D6D
Tax=RIFCSPHIGHO2_01_FULL_OD1_56_18_curated
Displaying 21 items

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